EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003899 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 27135 bases
Position: chr4A:11602740-11629874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004055	ResIII	PF04851.15	9.1e-12	1	1
ENSTGUP00000004055	DEAD	PF00270.29	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004100	-	3349	-	ENSTGUP00000004055	982 (aa)	-	H0Z0G8

Gene Model

Click here to download ENSTGUG00000003899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003899	-	58	42.583	ENSTGUG00000013392	-	63	42.583
ENSTGUG00000003899	-	50	45.049	ENSTGUG00000015488	-	60	45.049
ENSTGUG00000003899	-	99	87.971	ENSTGUG00000002408	SMARCA5	97	87.971
ENSTGUG00000003899	-	54	45.390	ENSTGUG00000007157	HELLS	66	45.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003899	-	100	92.770	ENSG00000102038	SMARCA1	93	92.770	Homo_sapiens
ENSTGUG00000003899	-	99	84.119	ENSAPOG00000016035	smarca5	98	84.573	Acanthochromis_polyacanthus
ENSTGUG00000003899	-	100	91.348	ENSAMEG00000015218	SMARCA1	93	91.348	Ailuropoda_melanoleuca
ENSTGUG00000003899	-	92	84.828	ENSACIG00000016982	smarca5	99	84.933	Amphilophus_citrinellus
ENSTGUG00000003899	-	99	84.119	ENSAOCG00000015578	smarca5	94	83.707	Amphiprion_ocellaris
ENSTGUG00000003899	-	99	84.119	ENSAPEG00000011117	smarca5	99	84.552	Amphiprion_percula
ENSTGUG00000003899	-	99	83.605	ENSATEG00000012894	smarca5	95	83.605	Anabas_testudineus
ENSTGUG00000003899	-	100	98.574	ENSAPLG00000013149	SMARCA1	100	98.574	Anas_platyrhynchos
ENSTGUG00000003899	-	100	96.232	ENSACAG00000011376	SMARCA1	94	96.232	Anolis_carolinensis
ENSTGUG00000003899	-	100	87.576	ENSANAG00000023098	SMARCA1	93	87.576	Aotus_nancymaae
ENSTGUG00000003899	-	99	84.216	ENSACLG00000025356	smarca5	94	84.216	Astatotilapia_calliptera
ENSTGUG00000003899	-	94	91.398	ENSAMXG00000011227	smarca1	97	93.711	Astyanax_mexicanus
ENSTGUG00000003899	-	99	85.026	ENSAMXG00000005709	smarca5	94	85.026	Astyanax_mexicanus
ENSTGUG00000003899	-	99	91.939	ENSBTAG00000002292	SMARCA1	91	91.824	Bos_taurus
ENSTGUG00000003899	-	99	63.746	WBGene00002169	isw-1	97	63.746	Caenorhabditis_elegans
ENSTGUG00000003899	-	100	92.872	ENSCJAG00000002868	SMARCA1	93	92.872	Callithrix_jacchus
ENSTGUG00000003899	-	100	82.482	ENSCAFG00000018673	SMARCA1	99	83.176	Canis_familiaris
ENSTGUG00000003899	-	100	92.668	ENSCAFG00020001751	SMARCA1	93	92.668	Canis_lupus_dingo
ENSTGUG00000003899	-	100	92.159	ENSCHIG00000009837	SMARCA1	93	92.159	Capra_hircus
ENSTGUG00000003899	-	100	92.872	ENSTSYG00000004240	SMARCA1	94	93.340	Carlito_syrichta
ENSTGUG00000003899	-	100	91.093	ENSCPOG00000013601	SMARCA1	94	91.093	Cavia_porcellus
ENSTGUG00000003899	-	100	89.929	ENSCCAG00000030817	SMARCA1	93	89.929	Cebus_capucinus
ENSTGUG00000003899	-	100	91.650	ENSCATG00000015921	SMARCA1	93	91.650	Cercocebus_atys
ENSTGUG00000003899	-	100	91.650	ENSCLAG00000002171	SMARCA1	93	91.650	Chinchilla_lanigera
ENSTGUG00000003899	-	100	92.770	ENSCSAG00000008460	SMARCA1	93	92.770	Chlorocebus_sabaeus
ENSTGUG00000003899	-	100	97.149	ENSCPBG00000001146	SMARCA1	93	97.149	Chrysemys_picta_bellii
ENSTGUG00000003899	-	99	74.002	ENSCING00000004110	swi/snf	97	74.002	Ciona_intestinalis
ENSTGUG00000003899	-	99	73.797	ENSCSAVG00000004620	-	100	74.610	Ciona_savignyi
ENSTGUG00000003899	-	100	92.668	ENSCANG00000007183	SMARCA1	93	92.668	Colobus_angolensis_palliatus
ENSTGUG00000003899	-	100	91.141	ENSCGRG00001010776	Smarca1	93	91.141	Cricetulus_griseus_chok1gshd
ENSTGUG00000003899	-	97	91.060	ENSCGRG00000015301	Smarca1	94	91.341	Cricetulus_griseus_crigri
ENSTGUG00000003899	-	99	84.016	ENSCSEG00000000328	smarca5	95	83.707	Cynoglossus_semilaevis
ENSTGUG00000003899	-	99	83.299	ENSCVAG00000008668	smarca5	99	84.099	Cyprinodon_variegatus
ENSTGUG00000003899	-	99	88.465	ENSDARG00000012776	smarca1	96	88.465	Danio_rerio
ENSTGUG00000003899	-	99	84.000	ENSDARG00000052348	smarca5	94	84.000	Danio_rerio
ENSTGUG00000003899	-	97	92.999	ENSDNOG00000004315	SMARCA1	91	93.312	Dasypus_novemcinctus
ENSTGUG00000003899	-	97	91.641	ENSDORG00000009270	Smarca1	90	91.932	Dipodomys_ordii
ENSTGUG00000003899	-	96	75.370	FBgn0011604	Iswi	97	73.234	Drosophila_melanogaster
ENSTGUG00000003899	-	83	88.393	ENSETEG00000017426	SMARCA1	83	88.393	Echinops_telfairi
ENSTGUG00000003899	-	99	82.533	ENSEBUG00000001239	smarca5	96	82.533	Eptatretus_burgeri
ENSTGUG00000003899	-	100	88.360	ENSEASG00005008218	SMARCA1	99	88.866	Equus_asinus_asinus
ENSTGUG00000003899	-	100	92.668	ENSECAG00000012106	SMARCA1	93	92.668	Equus_caballus
ENSTGUG00000003899	-	81	92.384	ENSEEUG00000014927	SMARCA1	80	92.384	Erinaceus_europaeus
ENSTGUG00000003899	-	99	90.408	ENSELUG00000010515	smarca1	96	90.739	Esox_lucius
ENSTGUG00000003899	-	100	92.363	ENSFCAG00000018496	SMARCA1	93	92.363	Felis_catus
ENSTGUG00000003899	-	93	99.671	ENSFALG00000000209	SMARCA1	98	99.671	Ficedula_albicollis
ENSTGUG00000003899	-	97	91.434	ENSFDAG00000009818	SMARCA1	94	91.719	Fukomys_damarensis
ENSTGUG00000003899	-	99	83.605	ENSFHEG00000007687	smarca5	94	83.605	Fundulus_heteroclitus
ENSTGUG00000003899	-	98	99.374	ENSGALG00000008431	SMARCA1	95	99.374	Gallus_gallus
ENSTGUG00000003899	-	99	83.809	ENSGAFG00000017731	smarca5	95	83.809	Gambusia_affinis
ENSTGUG00000003899	-	99	97.222	ENSGAGG00000023575	SMARCA1	100	97.222	Gopherus_agassizii
ENSTGUG00000003899	-	73	88.261	ENSGGOG00000012841	-	93	88.261	Gorilla_gorilla
ENSTGUG00000003899	-	100	91.141	ENSHGLG00000003080	SMARCA1	93	91.141	Heterocephalus_glaber_female
ENSTGUG00000003899	-	100	90.587	ENSHGLG00100001102	SMARCA1	99	90.587	Heterocephalus_glaber_male
ENSTGUG00000003899	-	99	83.845	ENSHCOG00000005458	smarca5	95	83.707	Hippocampus_comes
ENSTGUG00000003899	-	99	90.061	ENSIPUG00000016905	Smarca1	99	90.061	Ictalurus_punctatus
ENSTGUG00000003899	-	99	84.821	ENSIPUG00000005229	SMARCA5	96	84.821	Ictalurus_punctatus
ENSTGUG00000003899	-	100	92.261	ENSSTOG00000014524	SMARCA1	94	92.276	Ictidomys_tridecemlineatus
ENSTGUG00000003899	-	100	91.287	ENSJJAG00000002593	Smarca1	93	91.287	Jaculus_jaculus
ENSTGUG00000003899	-	99	83.538	ENSKMAG00000003777	smarca5	95	83.401	Kryptolebias_marmoratus
ENSTGUG00000003899	-	99	83.299	ENSLBEG00000018112	smarca5	95	83.299	Labrus_bergylta
ENSTGUG00000003899	-	94	84.832	ENSLBEG00000013295	SMARCA1	100	85.588	Labrus_bergylta
ENSTGUG00000003899	-	100	93.890	ENSLACG00000016697	SMARCA1	97	93.890	Latimeria_chalumnae
ENSTGUG00000003899	-	99	92.355	ENSLOCG00000014591	smarca1	96	92.355	Lepisosteus_oculatus
ENSTGUG00000003899	-	100	91.802	ENSLAFG00000000896	SMARCA1	98	91.802	Loxodonta_africana
ENSTGUG00000003899	-	100	92.770	ENSMFAG00000002117	SMARCA1	94	93.538	Macaca_fascicularis
ENSTGUG00000003899	-	100	91.650	ENSMMUG00000008818	SMARCA1	97	93.177	Macaca_mulatta
ENSTGUG00000003899	-	100	91.650	ENSMNEG00000041768	SMARCA1	94	93.538	Macaca_nemestrina
ENSTGUG00000003899	-	100	92.770	ENSMLEG00000043198	SMARCA1	93	92.770	Mandrillus_leucophaeus
ENSTGUG00000003899	-	99	83.809	ENSMAMG00000014294	smarca5	94	83.809	Mastacembelus_armatus
ENSTGUG00000003899	-	99	84.216	ENSMZEG00005009369	smarca5	94	84.216	Maylandia_zebra
ENSTGUG00000003899	-	100	97.787	ENSMGAG00000007042	SMARCA1	98	97.787	Meleagris_gallopavo
ENSTGUG00000003899	-	97	91.060	ENSMAUG00000008133	Smarca1	91	90.671	Mesocricetus_auratus
ENSTGUG00000003899	-	100	92.668	ENSMICG00000015768	SMARCA1	93	92.668	Microcebus_murinus
ENSTGUG00000003899	-	100	90.476	ENSMOCG00000009464	Smarca1	93	90.476	Microtus_ochrogaster
ENSTGUG00000003899	-	99	82.281	ENSMMOG00000005547	smarca5	99	82.281	Mola_mola
ENSTGUG00000003899	-	100	95.010	ENSMODG00000013187	-	95	95.010	Monodelphis_domestica
ENSTGUG00000003899	-	99	83.845	ENSMALG00000002081	smarca5	96	83.954	Monopterus_albus
ENSTGUG00000003899	-	100	90.578	MGP_CAROLIEiJ_G0033034	Smarca1	93	90.578	Mus_caroli
ENSTGUG00000003899	-	100	90.679	ENSMUSG00000031099	Smarca1	93	90.679	Mus_musculus
ENSTGUG00000003899	-	100	90.476	MGP_PahariEiJ_G0031579	Smarca1	93	90.476	Mus_pahari
ENSTGUG00000003899	-	100	90.679	MGP_SPRETEiJ_G0034192	Smarca1	93	90.679	Mus_spretus
ENSTGUG00000003899	-	100	91.348	ENSMPUG00000017423	SMARCA1	88	91.348	Mustela_putorius_furo
ENSTGUG00000003899	-	100	90.161	ENSMLUG00000029614	SMARCA1	93	90.161	Myotis_lucifugus
ENSTGUG00000003899	-	97	91.996	ENSNGAG00000006492	Smarca1	91	91.614	Nannospalax_galili
ENSTGUG00000003899	-	99	84.216	ENSNBRG00000004463	smarca5	98	84.216	Neolamprologus_brichardi
ENSTGUG00000003899	-	100	90.845	ENSNLEG00000015179	SMARCA1	94	92.593	Nomascus_leucogenys
ENSTGUG00000003899	-	94	85.439	ENSMEUG00000008819	SMARCA1	98	85.439	Notamacropus_eugenii
ENSTGUG00000003899	-	97	91.125	ENSODEG00000012163	SMARCA1	91	91.405	Octodon_degus
ENSTGUG00000003899	-	99	84.216	ENSONIG00000009993	smarca5	94	84.216	Oreochromis_niloticus
ENSTGUG00000003899	-	99	96.502	ENSOANG00000002862	SMARCA1	100	96.502	Ornithorhynchus_anatinus
ENSTGUG00000003899	-	100	92.159	ENSOCUG00000001047	SMARCA1	93	92.159	Oryctolagus_cuniculus
ENSTGUG00000003899	-	99	84.560	ENSORLG00000021998	smarca5	94	84.420	Oryzias_latipes
ENSTGUG00000003899	-	99	84.663	ENSORLG00020017679	smarca5	94	84.521	Oryzias_latipes_hni
ENSTGUG00000003899	-	99	84.560	ENSORLG00015017210	smarca5	94	84.318	Oryzias_latipes_hsok
ENSTGUG00000003899	-	99	84.663	ENSOMEG00000000086	smarca5	94	84.420	Oryzias_melastigma
ENSTGUG00000003899	-	97	92.570	ENSOGAG00000004399	SMARCA1	91	92.872	Otolemur_garnettii
ENSTGUG00000003899	-	99	92.143	ENSOARG00000014638	SMARCA1	100	92.143	Ovis_aries
ENSTGUG00000003899	-	100	92.770	ENSPPAG00000034647	SMARCA1	93	92.770	Pan_paniscus
ENSTGUG00000003899	-	100	92.566	ENSPPRG00000008929	SMARCA1	93	92.566	Panthera_pardus
ENSTGUG00000003899	-	100	90.591	ENSPTIG00000000915	SMARCA1	96	90.591	Panthera_tigris_altaica
ENSTGUG00000003899	-	100	92.770	ENSPTRG00000049876	SMARCA1	93	91.650	Pan_troglodytes
ENSTGUG00000003899	-	100	92.770	ENSPANG00000003871	SMARCA1	93	92.770	Papio_anubis
ENSTGUG00000003899	-	95	90.655	ENSPKIG00000013411	smarca1	94	90.675	Paramormyrops_kingsleyae
ENSTGUG00000003899	-	99	97.325	ENSPSIG00000010101	SMARCA1	100	97.325	Pelodiscus_sinensis
ENSTGUG00000003899	-	97	91.476	ENSPEMG00000017503	Smarca1	91	91.090	Peromyscus_maniculatus_bairdii
ENSTGUG00000003899	-	100	95.723	ENSPCIG00000015460	SMARCA1	96	95.723	Phascolarctos_cinereus
ENSTGUG00000003899	-	99	83.845	ENSPFOG00000007649	smarca5	95	83.605	Poecilia_formosa
ENSTGUG00000003899	-	99	83.845	ENSPLAG00000003363	smarca5	95	83.605	Poecilia_latipinna
ENSTGUG00000003899	-	99	83.947	ENSPMEG00000019849	smarca5	95	83.707	Poecilia_mexicana
ENSTGUG00000003899	-	99	83.947	ENSPREG00000023250	smarca5	95	83.707	Poecilia_reticulata
ENSTGUG00000003899	-	100	89.919	ENSPPYG00000020703	SMARCA1	93	89.919	Pongo_abelii
ENSTGUG00000003899	-	82	82.821	ENSPCOG00000020722	SMARCA1	94	88.840	Propithecus_coquereli
ENSTGUG00000003899	-	91	91.226	ENSPVAG00000003805	SMARCA1	91	85.220	Pteropus_vampyrus
ENSTGUG00000003899	-	60	86.027	ENSPNYG00000012299	smarca5	90	86.027	Pundamilia_nyererei
ENSTGUG00000003899	-	100	91.344	ENSRNOG00000003762	Smarca1	93	91.344	Rattus_norvegicus
ENSTGUG00000003899	-	100	92.668	ENSRROG00000034167	SMARCA1	93	92.668	Rhinopithecus_roxellana
ENSTGUG00000003899	-	99	92.653	ENSSBOG00000020641	SMARCA1	100	92.653	Saimiri_boliviensis_boliviensis
ENSTGUG00000003899	-	99	88.284	ENSSHAG00000013518	SMARCA1	99	88.284	Sarcophilus_harrisii
ENSTGUG00000003899	-	99	84.742	ENSSFOG00015016794	smarca5	100	84.742	Scleropages_formosus
ENSTGUG00000003899	-	100	90.863	ENSSFOG00015009043	smarca1	96	90.863	Scleropages_formosus
ENSTGUG00000003899	-	99	83.299	ENSSMAG00000004801	smarca5	95	83.299	Scophthalmus_maximus
ENSTGUG00000003899	-	99	83.605	ENSSDUG00000020690	smarca5	95	83.605	Seriola_dumerili
ENSTGUG00000003899	-	99	83.605	ENSSLDG00000025190	smarca5	95	83.605	Seriola_lalandi_dorsalis
ENSTGUG00000003899	-	83	92.199	ENSSARG00000000842	SMARCA1	81	92.199	Sorex_araneus
ENSTGUG00000003899	-	98	96.976	ENSSPUG00000000590	SMARCA1	93	96.976	Sphenodon_punctatus
ENSTGUG00000003899	-	99	83.809	ENSSPAG00000002894	smarca5	97	84.683	Stegastes_partitus
ENSTGUG00000003899	-	99	92.371	ENSSSCG00000012649	SMARCA1	94	92.292	Sus_scrofa
ENSTGUG00000003899	-	99	83.707	ENSTRUG00000014094	smarca5	95	83.707	Takifugu_rubripes
ENSTGUG00000003899	-	99	83.094	ENSTNIG00000017717	smarca5	94	82.790	Tetraodon_nigroviridis
ENSTGUG00000003899	-	91	90.466	ENSTBEG00000014973	SMARCA1	89	90.755	Tupaia_belangeri
ENSTGUG00000003899	-	97	88.728	ENSTTRG00000006168	SMARCA1	96	88.971	Tursiops_truncatus
ENSTGUG00000003899	-	100	92.261	ENSUAMG00000020201	SMARCA1	93	92.261	Ursus_americanus
ENSTGUG00000003899	-	100	87.223	ENSUMAG00000004073	SMARCA1	96	92.665	Ursus_maritimus
ENSTGUG00000003899	-	78	92.754	ENSVPAG00000010492	-	77	93.127	Vicugna_pacos
ENSTGUG00000003899	-	100	92.668	ENSVVUG00000008878	SMARCA1	98	93.617	Vulpes_vulpes
ENSTGUG00000003899	-	99	92.770	ENSXETG00000001526	smarca1	98	92.770	Xenopus_tropicalis
ENSTGUG00000003899	-	99	83.707	ENSXCOG00000011170	smarca5	97	83.707	Xiphophorus_couchianus
ENSTGUG00000003899	-	99	83.707	ENSXMAG00000009678	smarca5	98	84.691	Xiphophorus_maculatus