EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000003928 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 28644 bases
Position: chr8:3068837-3097480
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004060	EST1	PF10374.9	4.5e-25	1	1
ENSTGUP00000004060	EST1_DNA_bind	PF10373.9	1.7e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004105	SMG7-201	3399	-	ENSTGUP00000004060	1132 (aa)	-	H0Z0H3

Gene Model

Click here to download ENSTGUG00000003928's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003928	SMG7	100	89.163	ENSG00000116698	SMG7	99	89.251	Homo_sapiens
ENSTGUG00000003928	SMG7	89	75.038	ENSAPOG00000009611	smg7	95	75.038	Acanthochromis_polyacanthus
ENSTGUG00000003928	SMG7	100	89.163	ENSAMEG00000002357	SMG7	99	89.163	Ailuropoda_melanoleuca
ENSTGUG00000003928	SMG7	98	64.470	ENSACIG00000015152	smg7	100	64.915	Amphilophus_citrinellus
ENSTGUG00000003928	SMG7	100	66.438	ENSAOCG00000013538	smg7	99	66.752	Amphiprion_ocellaris
ENSTGUG00000003928	SMG7	100	66.495	ENSAPEG00000007851	smg7	99	66.809	Amphiprion_percula
ENSTGUG00000003928	SMG7	100	65.336	ENSATEG00000006931	smg7	99	65.841	Anabas_testudineus
ENSTGUG00000003928	SMG7	99	97.085	ENSAPLG00000015811	SMG7	99	97.085	Anas_platyrhynchos
ENSTGUG00000003928	SMG7	100	84.693	ENSACAG00000014989	SMG7	99	85.198	Anolis_carolinensis
ENSTGUG00000003928	SMG7	100	89.418	ENSANAG00000028114	SMG7	99	89.506	Aotus_nancymaae
ENSTGUG00000003928	SMG7	100	65.550	ENSACLG00000022079	smg7	99	64.974	Astatotilapia_calliptera
ENSTGUG00000003928	SMG7	100	68.875	ENSAMXG00000020809	smg7	99	67.645	Astyanax_mexicanus
ENSTGUG00000003928	SMG7	100	88.018	ENSBTAG00000008003	SMG7	99	88.106	Bos_taurus
ENSTGUG00000003928	SMG7	100	89.242	ENSCJAG00000005135	SMG7	99	88.801	Callithrix_jacchus
ENSTGUG00000003928	SMG7	100	82.194	ENSCAFG00000013276	SMG7	97	81.857	Canis_familiaris
ENSTGUG00000003928	SMG7	100	88.899	ENSCAFG00020015475	SMG7	99	88.546	Canis_lupus_dingo
ENSTGUG00000003928	SMG7	100	81.519	ENSCHIG00000018192	SMG7	99	81.519	Capra_hircus
ENSTGUG00000003928	SMG7	100	88.899	ENSTSYG00000002667	SMG7	99	88.899	Carlito_syrichta
ENSTGUG00000003928	SMG7	100	81.772	ENSCPOG00000008906	SMG7	99	80.844	Cavia_porcellus
ENSTGUG00000003928	SMG7	100	89.506	ENSCCAG00000028596	SMG7	99	89.594	Cebus_capucinus
ENSTGUG00000003928	SMG7	100	89.251	ENSCATG00000011063	SMG7	99	89.339	Cercocebus_atys
ENSTGUG00000003928	SMG7	100	88.546	ENSCLAG00000010751	SMG7	99	88.546	Chinchilla_lanigera
ENSTGUG00000003928	SMG7	100	82.194	ENSCSAG00000012654	SMG7	97	82.278	Chlorocebus_sabaeus
ENSTGUG00000003928	SMG7	92	77.636	ENSCHOG00000010522	SMG7	93	78.091	Choloepus_hoffmanni
ENSTGUG00000003928	SMG7	100	92.599	ENSCPBG00000015724	SMG7	99	92.599	Chrysemys_picta_bellii
ENSTGUG00000003928	SMG7	100	89.163	ENSCANG00000015680	SMG7	99	89.251	Colobus_angolensis_palliatus
ENSTGUG00000003928	SMG7	100	87.577	ENSCGRG00001013705	Smg7	99	87.665	Cricetulus_griseus_chok1gshd
ENSTGUG00000003928	SMG7	99	87.566	ENSCGRG00000018401	Smg7	100	87.654	Cricetulus_griseus_crigri
ENSTGUG00000003928	SMG7	99	63.668	ENSCVAG00000011842	smg7	100	63.925	Cyprinodon_variegatus
ENSTGUG00000003928	SMG7	100	67.823	ENSDARG00000060767	smg7	99	67.189	Danio_rerio
ENSTGUG00000003928	SMG7	100	81.350	ENSDORG00000007331	Smg7	99	81.435	Dipodomys_ordii
ENSTGUG00000003928	SMG7	97	81.446	ENSETEG00000002654	SMG7	99	81.533	Echinops_telfairi
ENSTGUG00000003928	SMG7	100	82.532	ENSEASG00005006524	SMG7	99	82.616	Equus_asinus_asinus
ENSTGUG00000003928	SMG7	93	98.780	ENSECAG00000004313	SMG7	97	98.485	Equus_caballus
ENSTGUG00000003928	SMG7	96	81.179	ENSEEUG00000002024	SMG7	92	80.915	Erinaceus_europaeus
ENSTGUG00000003928	SMG7	93	71.802	ENSELUG00000010293	smg7	92	72.772	Esox_lucius
ENSTGUG00000003928	SMG7	100	86.167	ENSFCAG00000010900	SMG7	99	85.424	Felis_catus
ENSTGUG00000003928	SMG7	99	91.056	ENSFALG00000003047	SMG7	100	91.056	Ficedula_albicollis
ENSTGUG00000003928	SMG7	99	81.503	ENSFDAG00000012121	SMG7	99	81.362	Fukomys_damarensis
ENSTGUG00000003928	SMG7	100	64.286	ENSFHEG00000011073	smg7	99	64.052	Fundulus_heteroclitus
ENSTGUG00000003928	SMG7	72	74.237	ENSGMOG00000004916	smg7	74	74.237	Gadus_morhua
ENSTGUG00000003928	SMG7	100	96.737	ENSGALG00000004667	SMG7	99	96.737	Gallus_gallus
ENSTGUG00000003928	SMG7	100	64.655	ENSGAFG00000019000	smg7	99	63.140	Gambusia_affinis
ENSTGUG00000003928	SMG7	98	63.172	ENSGACG00000001634	smg7	99	63.172	Gasterosteus_aculeatus
ENSTGUG00000003928	SMG7	100	89.251	ENSGGOG00000002342	SMG7	99	89.339	Gorilla_gorilla
ENSTGUG00000003928	SMG7	100	64.516	ENSHBUG00000003726	smg7	99	63.755	Haplochromis_burtoni
ENSTGUG00000003928	SMG7	100	88.634	ENSHGLG00000009353	SMG7	99	88.722	Heterocephalus_glaber_female
ENSTGUG00000003928	SMG7	100	75.021	ENSHGLG00100004878	-	99	75.105	Heterocephalus_glaber_male
ENSTGUG00000003928	SMG7	100	88.634	ENSHGLG00100009637	-	99	88.722	Heterocephalus_glaber_male
ENSTGUG00000003928	SMG7	100	68.794	ENSIPUG00000016997	smg7	99	68.329	Ictalurus_punctatus
ENSTGUG00000003928	SMG7	100	86.520	ENSSTOG00000000401	SMG7	99	86.520	Ictidomys_tridecemlineatus
ENSTGUG00000003928	SMG7	100	81.250	ENSJJAG00000012351	Smg7	99	81.250	Jaculus_jaculus
ENSTGUG00000003928	SMG7	98	61.963	ENSKMAG00000004900	smg7	100	61.930	Kryptolebias_marmoratus
ENSTGUG00000003928	SMG7	53	61.857	ENSLBEG00000005220	-	75	61.857	Labrus_bergylta
ENSTGUG00000003928	SMG7	100	65.487	ENSLBEG00000002983	smg7	99	65.030	Labrus_bergylta
ENSTGUG00000003928	SMG7	100	74.870	ENSLACG00000000972	SMG7	99	74.805	Latimeria_chalumnae
ENSTGUG00000003928	SMG7	100	67.917	ENSLOCG00000002010	smg7	99	66.473	Lepisosteus_oculatus
ENSTGUG00000003928	SMG7	100	82.110	ENSLAFG00000008186	SMG7	99	82.194	Loxodonta_africana
ENSTGUG00000003928	SMG7	100	86.079	ENSMFAG00000031653	SMG7	100	85.243	Macaca_fascicularis
ENSTGUG00000003928	SMG7	99	88.683	ENSMMUG00000018458	SMG7	99	88.771	Macaca_mulatta
ENSTGUG00000003928	SMG7	100	89.251	ENSMNEG00000034798	SMG7	99	89.339	Macaca_nemestrina
ENSTGUG00000003928	SMG7	100	89.251	ENSMLEG00000037170	SMG7	99	89.339	Mandrillus_leucophaeus
ENSTGUG00000003928	SMG7	88	64.752	ENSMAMG00000018733	smg7	84	63.851	Mastacembelus_armatus
ENSTGUG00000003928	SMG7	100	65.411	ENSMZEG00005015247	smg7	99	64.888	Maylandia_zebra
ENSTGUG00000003928	SMG7	99	96.640	ENSMGAG00000001561	SMG7	99	96.640	Meleagris_gallopavo
ENSTGUG00000003928	SMG7	100	87.665	ENSMAUG00000019484	Smg7	99	87.753	Mesocricetus_auratus
ENSTGUG00000003928	SMG7	100	89.692	ENSMICG00000007145	SMG7	99	89.163	Microcebus_murinus
ENSTGUG00000003928	SMG7	100	87.313	ENSMOCG00000020748	Smg7	99	87.401	Microtus_ochrogaster
ENSTGUG00000003928	SMG7	100	63.983	ENSMMOG00000001524	smg7	99	63.235	Mola_mola
ENSTGUG00000003928	SMG7	92	90.153	ENSMODG00000007139	SMG7	98	90.153	Monodelphis_domestica
ENSTGUG00000003928	SMG7	100	65.120	ENSMALG00000000061	smg7	93	65.184	Monopterus_albus
ENSTGUG00000003928	SMG7	100	87.401	MGP_CAROLIEiJ_G0014704	Smg7	99	87.048	Mus_caroli
ENSTGUG00000003928	SMG7	100	87.313	ENSMUSG00000042772	Smg7	99	87.401	Mus_musculus
ENSTGUG00000003928	SMG7	100	87.137	MGP_PahariEiJ_G0027940	Smg7	99	87.225	Mus_pahari
ENSTGUG00000003928	SMG7	100	87.401	MGP_SPRETEiJ_G0015511	Smg7	99	87.489	Mus_spretus
ENSTGUG00000003928	SMG7	99	82.213	ENSMPUG00000011732	SMG7	97	82.213	Mustela_putorius_furo
ENSTGUG00000003928	SMG7	100	81.435	ENSMLUG00000015417	SMG7	99	81.519	Myotis_lucifugus
ENSTGUG00000003928	SMG7	100	88.370	ENSNGAG00000009836	Smg7	99	87.753	Nannospalax_galili
ENSTGUG00000003928	SMG7	99	61.257	ENSNBRG00000024343	smg7	99	60.646	Neolamprologus_brichardi
ENSTGUG00000003928	SMG7	100	89.339	ENSNLEG00000018018	SMG7	99	89.427	Nomascus_leucogenys
ENSTGUG00000003928	SMG7	70	90.244	ENSMEUG00000004681	SMG7	73	90.244	Notamacropus_eugenii
ENSTGUG00000003928	SMG7	97	73.322	ENSOPRG00000013942	SMG7	96	73.060	Ochotona_princeps
ENSTGUG00000003928	SMG7	100	88.634	ENSODEG00000010390	SMG7	99	88.634	Octodon_degus
ENSTGUG00000003928	SMG7	100	65.154	ENSONIG00000000277	smg7	99	64.469	Oreochromis_niloticus
ENSTGUG00000003928	SMG7	99	81.733	ENSOANG00000000994	SMG7	100	81.648	Ornithorhynchus_anatinus
ENSTGUG00000003928	SMG7	100	76.203	ENSOCUG00000005887	SMG7	92	76.962	Oryctolagus_cuniculus
ENSTGUG00000003928	SMG7	100	63.377	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSTGUG00000003928	SMG7	100	63.636	ENSORLG00020015779	smg7	99	63.778	Oryzias_latipes_hni
ENSTGUG00000003928	SMG7	100	64.069	ENSORLG00015012289	smg7	99	63.692	Oryzias_latipes_hsok
ENSTGUG00000003928	SMG7	100	62.267	ENSOMEG00000002328	smg7	99	62.680	Oryzias_melastigma
ENSTGUG00000003928	SMG7	97	80.923	ENSOGAG00000003107	SMG7	93	80.662	Otolemur_garnettii
ENSTGUG00000003928	SMG7	99	85.080	ENSOARG00000001352	SMG7	100	85.080	Ovis_aries
ENSTGUG00000003928	SMG7	100	89.339	ENSPPAG00000031619	SMG7	99	89.427	Pan_paniscus
ENSTGUG00000003928	SMG7	100	89.604	ENSPPRG00000011222	SMG7	99	89.515	Panthera_pardus
ENSTGUG00000003928	SMG7	97	85.417	ENSPTIG00000007242	SMG7	100	85.330	Panthera_tigris_altaica
ENSTGUG00000003928	SMG7	100	89.339	ENSPTRG00000001764	SMG7	99	89.427	Pan_troglodytes
ENSTGUG00000003928	SMG7	100	89.251	ENSPANG00000004520	SMG7	99	89.339	Papio_anubis
ENSTGUG00000003928	SMG7	100	65.499	ENSPKIG00000007242	smg7	99	65.267	Paramormyrops_kingsleyae
ENSTGUG00000003928	SMG7	99	91.289	ENSPSIG00000012201	SMG7	100	91.022	Pelodiscus_sinensis
ENSTGUG00000003928	SMG7	72	41.955	ENSPMGG00000021833	smg7	98	42.212	Periophthalmus_magnuspinnatus
ENSTGUG00000003928	SMG7	100	85.198	ENSPEMG00000011315	Smg7	99	85.286	Peromyscus_maniculatus_bairdii
ENSTGUG00000003928	SMG7	100	89.515	ENSPCIG00000003786	SMG7	99	89.515	Phascolarctos_cinereus
ENSTGUG00000003928	SMG7	100	61.392	ENSPFOG00000019219	smg7	91	67.513	Poecilia_formosa
ENSTGUG00000003928	SMG7	100	64.021	ENSPLAG00000001446	smg7	99	62.722	Poecilia_latipinna
ENSTGUG00000003928	SMG7	97	63.191	ENSPMEG00000005218	smg7	99	61.867	Poecilia_mexicana
ENSTGUG00000003928	SMG7	86	64.934	ENSPREG00000019039	smg7	91	61.319	Poecilia_reticulata
ENSTGUG00000003928	SMG7	100	89.339	ENSPPYG00000000427	SMG7	99	89.427	Pongo_abelii
ENSTGUG00000003928	SMG7	96	71.768	ENSPCAG00000008360	SMG7	94	71.768	Procavia_capensis
ENSTGUG00000003928	SMG7	100	86.432	ENSPCOG00000011996	SMG7	99	85.903	Propithecus_coquereli
ENSTGUG00000003928	SMG7	92	76.994	ENSPVAG00000000851	SMG7	89	76.994	Pteropus_vampyrus
ENSTGUG00000003928	SMG7	100	65.978	ENSPNYG00000007643	smg7	99	65.371	Pundamilia_nyererei
ENSTGUG00000003928	SMG7	100	68.897	ENSPNAG00000011374	smg7	99	68.115	Pygocentrus_nattereri
ENSTGUG00000003928	SMG7	100	87.412	ENSRNOG00000027962	Smg7	99	87.412	Rattus_norvegicus
ENSTGUG00000003928	SMG7	100	89.163	ENSRBIG00000036316	SMG7	99	89.251	Rhinopithecus_bieti
ENSTGUG00000003928	SMG7	100	89.163	ENSRROG00000035719	SMG7	99	89.251	Rhinopithecus_roxellana
ENSTGUG00000003928	SMG7	100	86.067	ENSSBOG00000023454	SMG7	100	85.230	Saimiri_boliviensis_boliviensis
ENSTGUG00000003928	SMG7	99	89.153	ENSSHAG00000013147	SMG7	99	89.075	Sarcophilus_harrisii
ENSTGUG00000003928	SMG7	100	68.591	ENSSFOG00015017252	smg7	99	68.761	Scleropages_formosus
ENSTGUG00000003928	SMG7	100	65.858	ENSSMAG00000006067	smg7	99	65.744	Scophthalmus_maximus
ENSTGUG00000003928	SMG7	63	73.343	ENSSDUG00000017543	smg7	99	65.251	Seriola_dumerili
ENSTGUG00000003928	SMG7	100	91.101	ENSSPUG00000002064	SMG7	99	91.101	Sphenodon_punctatus
ENSTGUG00000003928	SMG7	99	66.432	ENSSPAG00000008733	smg7	98	65.358	Stegastes_partitus
ENSTGUG00000003928	SMG7	100	85.903	ENSSSCG00000015558	SMG7	99	85.991	Sus_scrofa
ENSTGUG00000003928	SMG7	100	59.091	ENSTNIG00000002802	smg7	99	58.742	Tetraodon_nigroviridis
ENSTGUG00000003928	SMG7	78	86.170	ENSTBEG00000003220	SMG7	71	86.170	Tupaia_belangeri
ENSTGUG00000003928	SMG7	97	81.098	ENSTTRG00000014778	SMG7	94	80.749	Tursiops_truncatus
ENSTGUG00000003928	SMG7	97	85.662	ENSUAMG00000017473	SMG7	100	85.662	Ursus_americanus
ENSTGUG00000003928	SMG7	97	85.662	ENSUMAG00000016389	SMG7	100	85.662	Ursus_maritimus
ENSTGUG00000003928	SMG7	100	85.991	ENSVVUG00000008976	SMG7	99	85.639	Vulpes_vulpes
ENSTGUG00000003928	SMG7	100	70.783	ENSXETG00000012528	smg7	99	70.026	Xenopus_tropicalis
ENSTGUG00000003928	SMG7	100	64.508	ENSXMAG00000007123	smg7	99	62.944	Xiphophorus_maculatus