EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003951 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 11837 bases
Position: chr14:2289039-2300875
Accession: 100217758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004061	MMR_HSR1	PF01926.23	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004106	-	1368	XM_012576691	ENSTGUP00000004061	455 (aa)	XP_012432145	H0Z0H4

Gene Model

Click here to download ENSTGUG00000003951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003951	-	82	31.635	ENSTGUG00000004572	EHD3	71	31.738
ENSTGUG00000003951	-	80	98.619	ENSTGUG00000016121	-	100	98.619
ENSTGUG00000003951	-	65	35.786	ENSTGUG00000010994	EHD4	55	35.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003951	-	99	90.265	ENSG00000185739	SRL	99	91.841	Homo_sapiens
ENSTGUG00000003951	-	98	75.839	ENSAPOG00000012432	SRL	99	75.839	Acanthochromis_polyacanthus
ENSTGUG00000003951	-	99	82.262	ENSAPOG00000018093	srl	99	82.993	Acanthochromis_polyacanthus
ENSTGUG00000003951	-	99	91.391	ENSAMEG00000010862	SRL	51	91.391	Ailuropoda_melanoleuca
ENSTGUG00000003951	-	97	83.864	ENSACIG00000015799	srl	98	83.864	Amphilophus_citrinellus
ENSTGUG00000003951	-	97	76.364	ENSACIG00000015419	SRL	98	76.364	Amphilophus_citrinellus
ENSTGUG00000003951	-	95	84.028	ENSAOCG00000007574	srl	99	84.028	Amphiprion_ocellaris
ENSTGUG00000003951	-	98	75.670	ENSAOCG00000017049	SRL	97	75.670	Amphiprion_ocellaris
ENSTGUG00000003951	-	98	72.036	ENSAPEG00000006533	SRL	97	72.768	Amphiprion_percula
ENSTGUG00000003951	-	99	82.483	ENSAPEG00000006911	srl	96	82.483	Amphiprion_percula
ENSTGUG00000003951	-	97	83.864	ENSATEG00000024315	srl	93	83.864	Anabas_testudineus
ENSTGUG00000003951	-	99	71.645	ENSATEG00000009643	SRL	53	72.078	Anabas_testudineus
ENSTGUG00000003951	-	97	91.170	ENSACAG00000016380	SRL	85	90.086	Anolis_carolinensis
ENSTGUG00000003951	-	99	82.705	ENSACLG00000027685	srl	96	83.864	Astatotilapia_calliptera
ENSTGUG00000003951	-	97	73.068	ENSACLG00000024674	SRL	55	75.430	Astatotilapia_calliptera
ENSTGUG00000003951	-	99	81.057	ENSAMXG00000018789	srl	89	81.057	Astyanax_mexicanus
ENSTGUG00000003951	-	91	76.812	ENSAMXG00000038693	SRL	99	72.506	Astyanax_mexicanus
ENSTGUG00000003951	-	100	90.132	ENSBTAG00000001078	SRL	58	90.132	Bos_taurus
ENSTGUG00000003951	-	97	91.364	ENSCJAG00000019750	SRL	96	90.265	Callithrix_jacchus
ENSTGUG00000003951	-	99	90.929	ENSCAFG00000019233	SRL	84	90.929	Canis_familiaris
ENSTGUG00000003951	-	99	90.929	ENSCAFG00020025024	SRL	56	90.929	Canis_lupus_dingo
ENSTGUG00000003951	-	99	90.529	ENSCHIG00000017927	SRL	57	90.508	Capra_hircus
ENSTGUG00000003951	-	99	91.150	ENSTSYG00000007919	SRL	99	92.774	Carlito_syrichta
ENSTGUG00000003951	-	99	89.890	ENSCPOG00000012643	SRL	96	89.890	Cavia_porcellus
ENSTGUG00000003951	-	97	85.455	ENSCCAG00000032646	SRL	99	92.063	Cebus_capucinus
ENSTGUG00000003951	-	99	90.265	ENSCATG00000032227	-	96	90.265	Cercocebus_atys
ENSTGUG00000003951	-	99	90.110	ENSCLAG00000016242	SRL	96	90.110	Chinchilla_lanigera
ENSTGUG00000003951	-	85	92.487	ENSCHOG00000001618	SRL	52	92.487	Choloepus_hoffmanni
ENSTGUG00000003951	-	99	95.607	ENSCPBG00000026371	SRL	96	90.948	Chrysemys_picta_bellii
ENSTGUG00000003951	-	93	59.629	ENSCING00000005231	-	93	61.058	Ciona_intestinalis
ENSTGUG00000003951	-	99	90.044	ENSCANG00000035872	SRL	99	91.841	Colobus_angolensis_palliatus
ENSTGUG00000003951	-	99	90.044	ENSCGRG00001016630	Srl	96	89.451	Cricetulus_griseus_chok1gshd
ENSTGUG00000003951	-	99	90.044	ENSCGRG00000005458	Srl	96	89.451	Cricetulus_griseus_crigri
ENSTGUG00000003951	-	99	70.110	ENSCSEG00000011866	SRL	91	70.110	Cynoglossus_semilaevis
ENSTGUG00000003951	-	97	84.318	ENSCSEG00000016151	srl	94	84.318	Cynoglossus_semilaevis
ENSTGUG00000003951	-	97	84.318	ENSCVAG00000003513	srl	95	84.318	Cyprinodon_variegatus
ENSTGUG00000003951	-	97	74.667	ENSCVAG00000022465	SRL	59	74.667	Cyprinodon_variegatus
ENSTGUG00000003951	-	83	76.240	ENSDARG00000112959	CABZ01072309.1	99	76.240	Danio_rerio
ENSTGUG00000003951	-	97	84.091	ENSDARG00000104587	srl	94	84.091	Danio_rerio
ENSTGUG00000003951	-	99	90.000	ENSDNOG00000011643	SRL	54	90.044	Dasypus_novemcinctus
ENSTGUG00000003951	-	99	89.451	ENSDORG00000014807	Srl	96	89.451	Dipodomys_ordii
ENSTGUG00000003951	-	81	65.160	ENSEBUG00000015937	srl	95	65.160	Eptatretus_burgeri
ENSTGUG00000003951	-	99	91.353	ENSEASG00005000942	SRL	55	91.009	Equus_asinus_asinus
ENSTGUG00000003951	-	99	91.391	ENSECAG00000024219	SRL	96	91.391	Equus_caballus
ENSTGUG00000003951	-	99	79.657	ENSELUG00000015616	srl	96	79.657	Esox_lucius
ENSTGUG00000003951	-	97	92.045	ENSFCAG00000022075	SRL	96	91.150	Felis_catus
ENSTGUG00000003951	-	99	99.779	ENSFALG00000004328	SRL	64	99.779	Ficedula_albicollis
ENSTGUG00000003951	-	99	90.909	ENSFDAG00000006199	SRL	96	90.909	Fukomys_damarensis
ENSTGUG00000003951	-	97	83.409	ENSFHEG00000011239	srl	95	83.409	Fundulus_heteroclitus
ENSTGUG00000003951	-	98	75.615	ENSFHEG00000011854	SRL	99	75.615	Fundulus_heteroclitus
ENSTGUG00000003951	-	97	80.531	ENSGMOG00000014954	srl	99	80.531	Gadus_morhua
ENSTGUG00000003951	-	99	97.566	ENSGALG00000038884	SRL	96	97.566	Gallus_gallus
ENSTGUG00000003951	-	97	76.591	ENSGAFG00000016984	SRL	98	76.591	Gambusia_affinis
ENSTGUG00000003951	-	99	82.705	ENSGAFG00000000010	srl	98	82.705	Gambusia_affinis
ENSTGUG00000003951	-	97	80.752	ENSGACG00000011332	srl	99	80.752	Gasterosteus_aculeatus
ENSTGUG00000003951	-	99	90.265	ENSGGOG00000011312	-	96	90.265	Gorilla_gorilla
ENSTGUG00000003951	-	97	72.848	ENSHBUG00000015710	SRL	56	73.068	Haplochromis_burtoni
ENSTGUG00000003951	-	99	82.705	ENSHBUG00000007581	srl	96	83.864	Haplochromis_burtoni
ENSTGUG00000003951	-	99	90.549	ENSHGLG00000015271	SRL	96	90.549	Heterocephalus_glaber_female
ENSTGUG00000003951	-	99	90.549	ENSHGLG00100019378	SRL	96	90.549	Heterocephalus_glaber_male
ENSTGUG00000003951	-	97	71.840	ENSHCOG00000001012	SRL	50	71.840	Hippocampus_comes
ENSTGUG00000003951	-	99	82.159	ENSHCOG00000008687	srl	98	83.864	Hippocampus_comes
ENSTGUG00000003951	-	99	80.889	ENSIPUG00000012513	srl	96	81.027	Ictalurus_punctatus
ENSTGUG00000003951	-	93	70.686	ENSIPUG00000011609	SRL	92	70.686	Ictalurus_punctatus
ENSTGUG00000003951	-	99	90.110	ENSSTOG00000021151	-	96	89.890	Ictidomys_tridecemlineatus
ENSTGUG00000003951	-	99	89.670	ENSJJAG00000016400	Srl	96	89.670	Jaculus_jaculus
ENSTGUG00000003951	-	97	75.909	ENSKMAG00000019537	SRL	99	75.909	Kryptolebias_marmoratus
ENSTGUG00000003951	-	97	83.447	ENSKMAG00000014115	srl	92	86.364	Kryptolebias_marmoratus
ENSTGUG00000003951	-	99	81.556	ENSLBEG00000026643	srl	96	81.556	Labrus_bergylta
ENSTGUG00000003951	-	98	74.720	ENSLBEG00000013811	SRL	97	74.720	Labrus_bergylta
ENSTGUG00000003951	-	99	85.588	ENSLACG00000002825	SRL	99	85.588	Latimeria_chalumnae
ENSTGUG00000003951	-	99	84.989	ENSLOCG00000002644	srl	97	84.989	Lepisosteus_oculatus
ENSTGUG00000003951	-	99	90.265	ENSLAFG00000006329	SRL	51	90.265	Loxodonta_africana
ENSTGUG00000003951	-	94	91.841	ENSMFAG00000037383	SRL	99	91.841	Macaca_fascicularis
ENSTGUG00000003951	-	99	90.044	ENSMNEG00000019236	-	96	90.044	Macaca_nemestrina
ENSTGUG00000003951	-	99	82.522	ENSMLEG00000032156	SRL	95	82.522	Mandrillus_leucophaeus
ENSTGUG00000003951	-	98	72.985	ENSMAMG00000013756	SRL	54	72.985	Mastacembelus_armatus
ENSTGUG00000003951	-	97	83.636	ENSMAMG00000023322	srl	93	83.636	Mastacembelus_armatus
ENSTGUG00000003951	-	99	82.705	ENSMZEG00005004548	srl	96	83.864	Maylandia_zebra
ENSTGUG00000003951	-	97	73.068	ENSMZEG00005004010	SRL	57	73.289	Maylandia_zebra
ENSTGUG00000003951	-	99	97.345	ENSMGAG00000009342	SRL	95	97.872	Meleagris_gallopavo
ENSTGUG00000003951	-	99	90.708	ENSMICG00000032307	SRL	96	90.708	Microcebus_murinus
ENSTGUG00000003951	-	99	89.357	ENSMOCG00000008208	Srl	96	88.791	Microtus_ochrogaster
ENSTGUG00000003951	-	97	71.554	ENSMMOG00000021572	SRL	99	71.554	Mola_mola
ENSTGUG00000003951	-	98	82.366	ENSMMOG00000013970	srl	99	82.366	Mola_mola
ENSTGUG00000003951	-	99	91.593	ENSMODG00000016380	-	51	91.593	Monodelphis_domestica
ENSTGUG00000003951	-	91	76.145	ENSMALG00000000670	SRL	97	76.145	Monopterus_albus
ENSTGUG00000003951	-	98	82.366	ENSMALG00000005039	srl	98	83.070	Monopterus_albus
ENSTGUG00000003951	-	99	90.708	MGP_CAROLIEiJ_G0020400	Srl	96	90.110	Mus_caroli
ENSTGUG00000003951	-	99	90.708	ENSMUSG00000022519	Srl	96	90.110	Mus_musculus
ENSTGUG00000003951	-	99	90.708	MGP_SPRETEiJ_G0021294	Srl	96	90.110	Mus_spretus
ENSTGUG00000003951	-	99	90.929	ENSMPUG00000015025	SRL	55	90.929	Mustela_putorius_furo
ENSTGUG00000003951	-	99	90.529	ENSMLUG00000030733	SRL	57	90.529	Myotis_lucifugus
ENSTGUG00000003951	-	99	89.800	ENSNGAG00000019741	Srl	96	89.231	Nannospalax_galili
ENSTGUG00000003951	-	97	83.636	ENSNBRG00000023775	srl	94	83.636	Neolamprologus_brichardi
ENSTGUG00000003951	-	97	72.627	ENSNBRG00000002422	SRL	58	72.160	Neolamprologus_brichardi
ENSTGUG00000003951	-	99	83.814	ENSNLEG00000029051	SRL	95	83.814	Nomascus_leucogenys
ENSTGUG00000003951	-	99	83.921	ENSOPRG00000000477	-	53	83.921	Ochotona_princeps
ENSTGUG00000003951	-	99	89.451	ENSODEG00000013256	SRL	96	89.451	Octodon_degus
ENSTGUG00000003951	-	97	83.636	ENSONIG00000005192	srl	93	83.636	Oreochromis_niloticus
ENSTGUG00000003951	-	99	89.890	ENSOCUG00000025140	SRL	50	89.890	Oryctolagus_cuniculus
ENSTGUG00000003951	-	97	83.636	ENSORLG00000008291	srl	91	86.822	Oryzias_latipes
ENSTGUG00000003951	-	98	74.944	ENSORLG00000015064	SRL	98	74.944	Oryzias_latipes
ENSTGUG00000003951	-	97	83.182	ENSORLG00020019784	srl	79	86.305	Oryzias_latipes_hni
ENSTGUG00000003951	-	98	75.168	ENSORLG00020018173	SRL	98	75.168	Oryzias_latipes_hni
ENSTGUG00000003951	-	97	82.727	ENSORLG00015009342	srl	91	82.727	Oryzias_latipes_hsok
ENSTGUG00000003951	-	98	75.391	ENSORLG00015019063	SRL	98	75.391	Oryzias_latipes_hsok
ENSTGUG00000003951	-	98	82.247	ENSOMEG00000010006	srl	99	82.247	Oryzias_melastigma
ENSTGUG00000003951	-	98	72.826	ENSOMEG00000005682	SRL	53	73.043	Oryzias_melastigma
ENSTGUG00000003951	-	99	90.330	ENSOGAG00000029266	SRL	55	90.330	Otolemur_garnettii
ENSTGUG00000003951	-	99	90.529	ENSOARG00000003074	SRL	57	90.529	Ovis_aries
ENSTGUG00000003951	-	99	90.265	ENSPPAG00000024919	-	99	91.841	Pan_paniscus
ENSTGUG00000003951	-	97	92.273	ENSPPRG00000010274	SRL	99	92.774	Panthera_pardus
ENSTGUG00000003951	-	97	92.273	ENSPTIG00000015162	SRL	99	92.774	Panthera_tigris_altaica
ENSTGUG00000003951	-	99	90.265	ENSPTRG00000007712	SRL	99	91.841	Pan_troglodytes
ENSTGUG00000003951	-	99	90.265	ENSPANG00000013804	SRL	97	90.265	Papio_anubis
ENSTGUG00000003951	-	97	76.136	ENSPKIG00000024974	SRL	88	76.136	Paramormyrops_kingsleyae
ENSTGUG00000003951	-	99	82.018	ENSPKIG00000006405	srl	96	82.018	Paramormyrops_kingsleyae
ENSTGUG00000003951	-	99	92.257	ENSPSIG00000008586	SRL	51	92.257	Pelodiscus_sinensis
ENSTGUG00000003951	-	97	72.727	ENSPMGG00000023505	-	99	72.727	Periophthalmus_magnuspinnatus
ENSTGUG00000003951	-	99	82.889	ENSPMGG00000021081	srl	97	82.889	Periophthalmus_magnuspinnatus
ENSTGUG00000003951	-	99	89.579	ENSPEMG00000015842	Srl	96	89.011	Peromyscus_maniculatus_bairdii
ENSTGUG00000003951	-	92	68.578	ENSPMAG00000004786	srl	99	68.578	Petromyzon_marinus
ENSTGUG00000003951	-	99	91.391	ENSPCIG00000012128	SRL	99	91.391	Phascolarctos_cinereus
ENSTGUG00000003951	-	97	81.858	ENSPFOG00000011408	srl	93	81.858	Poecilia_formosa
ENSTGUG00000003951	-	97	75.227	ENSPLAG00000002932	SRL	98	75.227	Poecilia_latipinna
ENSTGUG00000003951	-	99	82.483	ENSPLAG00000008017	srl	98	82.483	Poecilia_latipinna
ENSTGUG00000003951	-	99	82.483	ENSPMEG00000006745	srl	98	82.483	Poecilia_mexicana
ENSTGUG00000003951	-	97	73.289	ENSPMEG00000005890	SRL	59	73.731	Poecilia_mexicana
ENSTGUG00000003951	-	97	83.636	ENSPREG00000007751	srl	98	83.636	Poecilia_reticulata
ENSTGUG00000003951	-	98	75.446	ENSPREG00000000315	SRL	99	75.446	Poecilia_reticulata
ENSTGUG00000003951	-	92	92.344	ENSPPYG00000007053	SRL	97	92.344	Pongo_abelii
ENSTGUG00000003951	-	100	90.789	ENSPCAG00000003378	-	51	90.789	Procavia_capensis
ENSTGUG00000003951	-	99	90.708	ENSPCOG00000023135	SRL	99	92.541	Propithecus_coquereli
ENSTGUG00000003951	-	99	90.929	ENSPVAG00000006586	SRL	56	90.929	Pteropus_vampyrus
ENSTGUG00000003951	-	99	82.705	ENSPNYG00000001200	srl	96	83.864	Pundamilia_nyererei
ENSTGUG00000003951	-	97	73.068	ENSPNYG00000003423	SRL	56	73.289	Pundamilia_nyererei
ENSTGUG00000003951	-	98	73.767	ENSPNAG00000007361	-	92	73.767	Pygocentrus_nattereri
ENSTGUG00000003951	-	99	81.498	ENSPNAG00000023106	srl	96	81.498	Pygocentrus_nattereri
ENSTGUG00000003951	-	99	90.708	ENSRNOG00000005269	Srl	50	90.708	Rattus_norvegicus
ENSTGUG00000003951	-	99	90.265	ENSRBIG00000042358	SRL	50	90.265	Rhinopithecus_bieti
ENSTGUG00000003951	-	97	91.364	ENSSBOG00000029273	SRL	96	90.265	Saimiri_boliviensis_boliviensis
ENSTGUG00000003951	-	99	91.611	ENSSHAG00000011715	-	51	91.574	Sarcophilus_harrisii
ENSTGUG00000003951	-	97	84.318	ENSSFOG00015009773	srl	97	82.599	Scleropages_formosus
ENSTGUG00000003951	-	99	71.058	ENSSMAG00000002232	SRL	50	72.247	Scophthalmus_maximus
ENSTGUG00000003951	-	97	82.273	ENSSMAG00000016274	srl	96	82.273	Scophthalmus_maximus
ENSTGUG00000003951	-	98	73.846	ENSSDUG00000009161	SRL	99	73.846	Seriola_dumerili
ENSTGUG00000003951	-	97	84.091	ENSSDUG00000010808	srl	97	84.091	Seriola_dumerili
ENSTGUG00000003951	-	97	84.091	ENSSLDG00000022024	srl	95	84.091	Seriola_lalandi_dorsalis
ENSTGUG00000003951	-	97	74.172	ENSSLDG00000014601	SRL	99	74.393	Seriola_lalandi_dorsalis
ENSTGUG00000003951	-	99	92.494	ENSSPUG00000016859	SRL	99	92.494	Sphenodon_punctatus
ENSTGUG00000003951	-	98	75.839	ENSSPAG00000014254	SRL	99	75.839	Stegastes_partitus
ENSTGUG00000003951	-	99	82.483	ENSSPAG00000019105	srl	96	82.483	Stegastes_partitus
ENSTGUG00000003951	-	99	90.287	ENSSSCG00000007949	SRL	99	90.380	Sus_scrofa
ENSTGUG00000003951	-	92	74.702	ENSTRUG00000013310	SRL	55	74.702	Takifugu_rubripes
ENSTGUG00000003951	-	97	83.484	ENSTRUG00000006005	srl	94	83.484	Takifugu_rubripes
ENSTGUG00000003951	-	97	83.484	ENSTNIG00000009739	srl	94	83.484	Tetraodon_nigroviridis
ENSTGUG00000003951	-	99	91.150	ENSUAMG00000005701	SRL	56	91.150	Ursus_americanus
ENSTGUG00000003951	-	99	91.150	ENSUMAG00000002574	SRL	56	91.150	Ursus_maritimus
ENSTGUG00000003951	-	99	90.549	ENSVVUG00000016331	-	50	90.549	Vulpes_vulpes
ENSTGUG00000003951	-	99	90.000	ENSXETG00000017313	srl	99	90.000	Xenopus_tropicalis
ENSTGUG00000003951	-	92	85.885	ENSXCOG00000010424	srl	96	85.885	Xiphophorus_couchianus
ENSTGUG00000003951	-	97	75.909	ENSXCOG00000014584	SRL	98	75.909	Xiphophorus_couchianus
ENSTGUG00000003951	-	97	84.091	ENSXMAG00000004625	srl	89	84.091	Xiphophorus_maculatus
ENSTGUG00000003951	-	97	73.951	ENSXMAG00000027598	SRL	62	74.172	Xiphophorus_maculatus