EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000004090 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 30211 bases
Position: chr8:3369850-3400060
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004219	zf-CCCH	PF00642.24	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004264	RC3H1-201	3405	-	ENSTGUP00000004219	1134 (aa)	-	H0Z0Y2

Gene Model

Click here to download ENSTGUG00000004090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000004090	RC3H1	97	51.298	ENSTGUG00000006889	-	93	51.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004090	RC3H1	100	87.895	ENSG00000135870	RC3H1	100	87.895	Homo_sapiens
ENSTGUG00000004090	RC3H1	100	86.995	ENSAMEG00000015657	RC3H1	100	87.709	Ailuropoda_melanoleuca
ENSTGUG00000004090	RC3H1	100	94.046	ENSAPLG00000005341	RC3H1	100	94.138	Anas_platyrhynchos
ENSTGUG00000004090	RC3H1	100	85.302	ENSACAG00000015271	RC3H1	100	85.214	Anolis_carolinensis
ENSTGUG00000004090	RC3H1	100	87.456	ENSANAG00000036716	RC3H1	100	87.544	Aotus_nancymaae
ENSTGUG00000004090	RC3H1	100	86.304	ENSBTAG00000052708	RC3H1	100	87.018	Bos_taurus
ENSTGUG00000004090	RC3H1	100	87.193	ENSCJAG00000009106	RC3H1	100	87.281	Callithrix_jacchus
ENSTGUG00000004090	RC3H1	100	86.907	ENSCAFG00000014434	RC3H1	100	87.621	Canis_familiaris
ENSTGUG00000004090	RC3H1	100	86.831	ENSCAFG00020017112	RC3H1	99	97.303	Canis_lupus_dingo
ENSTGUG00000004090	RC3H1	100	86.555	ENSCHIG00000002873	RC3H1	100	87.270	Capra_hircus
ENSTGUG00000004090	RC3H1	99	85.413	ENSTSYG00000003913	RC3H1	99	85.664	Carlito_syrichta
ENSTGUG00000004090	RC3H1	100	84.609	ENSCPOG00000004349	RC3H1	100	84.609	Cavia_porcellus
ENSTGUG00000004090	RC3H1	100	85.877	ENSCCAG00000025652	RC3H1	100	85.965	Cebus_capucinus
ENSTGUG00000004090	RC3H1	100	87.719	ENSCATG00000033497	RC3H1	100	87.719	Cercocebus_atys
ENSTGUG00000004090	RC3H1	100	86.216	ENSCLAG00000011267	RC3H1	100	86.304	Chinchilla_lanigera
ENSTGUG00000004090	RC3H1	96	87.923	ENSCSAG00000011823	RC3H1	85	87.923	Chlorocebus_sabaeus
ENSTGUG00000004090	RC3H1	100	89.289	ENSCPBG00000014670	RC3H1	100	89.201	Chrysemys_picta_bellii
ENSTGUG00000004090	RC3H1	100	87.730	ENSCANG00000032120	RC3H1	100	87.730	Colobus_angolensis_palliatus
ENSTGUG00000004090	RC3H1	100	85.035	ENSCGRG00001020812	Rc3h1	100	85.752	Cricetulus_griseus_chok1gshd
ENSTGUG00000004090	RC3H1	100	85.035	ENSCGRG00000011952	Rc3h1	100	85.752	Cricetulus_griseus_crigri
ENSTGUG00000004090	RC3H1	55	80.763	ENSDNOG00000011494	RC3H1	99	80.763	Dasypus_novemcinctus
ENSTGUG00000004090	RC3H1	100	85.940	ENSDORG00000004855	Rc3h1	100	86.567	Dipodomys_ordii
ENSTGUG00000004090	RC3H1	81	86.603	ENSETEG00000012064	RC3H1	87	87.575	Echinops_telfairi
ENSTGUG00000004090	RC3H1	100	85.501	ENSEASG00005017000	RC3H1	100	86.216	Equus_asinus_asinus
ENSTGUG00000004090	RC3H1	100	85.413	ENSECAG00000021208	RC3H1	100	86.128	Equus_caballus
ENSTGUG00000004090	RC3H1	84	80.891	ENSEEUG00000014861	RC3H1	88	80.891	Erinaceus_europaeus
ENSTGUG00000004090	RC3H1	100	87.270	ENSFCAG00000014924	RC3H1	100	87.982	Felis_catus
ENSTGUG00000004090	RC3H1	100	97.281	ENSFALG00000002947	RC3H1	100	97.281	Ficedula_albicollis
ENSTGUG00000004090	RC3H1	100	86.655	ENSFDAG00000013303	RC3H1	100	86.743	Fukomys_damarensis
ENSTGUG00000004090	RC3H1	100	92.952	ENSGALG00000004587	RC3H1	100	92.952	Gallus_gallus
ENSTGUG00000004090	RC3H1	100	87.884	ENSGAGG00000018194	RC3H1	100	87.796	Gopherus_agassizii
ENSTGUG00000004090	RC3H1	100	81.556	ENSGGOG00000005735	RC3H1	100	81.556	Gorilla_gorilla
ENSTGUG00000004090	RC3H1	88	81.757	ENSHGLG00000004183	-	99	81.757	Heterocephalus_glaber_female
ENSTGUG00000004090	RC3H1	100	85.777	ENSHGLG00100008577	RC3H1	100	85.865	Heterocephalus_glaber_male
ENSTGUG00000004090	RC3H1	100	87.170	ENSSTOG00000016033	RC3H1	100	87.445	Ictidomys_tridecemlineatus
ENSTGUG00000004090	RC3H1	100	85.400	ENSJJAG00000018915	Rc3h1	100	86.116	Jaculus_jaculus
ENSTGUG00000004090	RC3H1	100	73.785	ENSLACG00000016186	RC3H1	100	76.963	Latimeria_chalumnae
ENSTGUG00000004090	RC3H1	97	87.296	ENSLAFG00000004367	RC3H1	99	88.033	Loxodonta_africana
ENSTGUG00000004090	RC3H1	100	87.632	ENSMFAG00000033725	RC3H1	100	87.632	Macaca_fascicularis
ENSTGUG00000004090	RC3H1	100	87.632	ENSMMUG00000000630	RC3H1	100	87.632	Macaca_mulatta
ENSTGUG00000004090	RC3H1	100	87.719	ENSMNEG00000035968	RC3H1	100	87.719	Macaca_nemestrina
ENSTGUG00000004090	RC3H1	100	87.807	ENSMLEG00000037455	RC3H1	100	87.807	Mandrillus_leucophaeus
ENSTGUG00000004090	RC3H1	88	85.170	ENSMAUG00000020864	Rc3h1	94	85.986	Mesocricetus_auratus
ENSTGUG00000004090	RC3H1	100	86.907	ENSMICG00000003000	RC3H1	100	87.621	Microcebus_murinus
ENSTGUG00000004090	RC3H1	93	83.286	ENSMOCG00000016587	Rc3h1	98	84.057	Microtus_ochrogaster
ENSTGUG00000004090	RC3H1	100	86.216	ENSMODG00000004289	RC3H1	100	86.930	Monodelphis_domestica
ENSTGUG00000004090	RC3H1	100	85.752	MGP_CAROLIEiJ_G0014756	Rc3h1	100	85.752	Mus_caroli
ENSTGUG00000004090	RC3H1	100	85.664	ENSMUSG00000040423	Rc3h1	100	85.664	Mus_musculus
ENSTGUG00000004090	RC3H1	100	85.664	MGP_PahariEiJ_G0027992	Rc3h1	100	85.664	Mus_pahari
ENSTGUG00000004090	RC3H1	100	85.664	MGP_SPRETEiJ_G0015563	Rc3h1	100	85.664	Mus_spretus
ENSTGUG00000004090	RC3H1	100	87.071	ENSMPUG00000004747	RC3H1	100	87.786	Mustela_putorius_furo
ENSTGUG00000004090	RC3H1	100	85.488	ENSMLUG00000011127	RC3H1	100	86.204	Myotis_lucifugus
ENSTGUG00000004090	RC3H1	100	85.915	ENSNGAG00000011135	Rc3h1	100	86.631	Nannospalax_galili
ENSTGUG00000004090	RC3H1	100	87.982	ENSNLEG00000015327	RC3H1	100	87.982	Nomascus_leucogenys
ENSTGUG00000004090	RC3H1	99	74.736	ENSOPRG00000013068	RC3H1	99	75.022	Ochotona_princeps
ENSTGUG00000004090	RC3H1	100	86.567	ENSODEG00000014185	RC3H1	100	86.567	Octodon_degus
ENSTGUG00000004090	RC3H1	100	86.957	ENSOANG00000000924	RC3H1	100	87.130	Ornithorhynchus_anatinus
ENSTGUG00000004090	RC3H1	99	86.631	ENSOCUG00000004930	RC3H1	98	87.355	Oryctolagus_cuniculus
ENSTGUG00000004090	RC3H1	100	80.018	ENSOGAG00000004044	RC3H1	100	80.894	Otolemur_garnettii
ENSTGUG00000004090	RC3H1	100	86.736	ENSOARG00000013011	RC3H1	100	87.446	Ovis_aries
ENSTGUG00000004090	RC3H1	100	87.905	ENSPPAG00000039253	RC3H1	100	87.905	Pan_paniscus
ENSTGUG00000004090	RC3H1	100	86.467	ENSPPRG00000009007	RC3H1	100	87.182	Panthera_pardus
ENSTGUG00000004090	RC3H1	100	86.789	ENSPTIG00000015326	RC3H1	100	87.500	Panthera_tigris_altaica
ENSTGUG00000004090	RC3H1	100	87.905	ENSPTRG00000001702	RC3H1	100	87.905	Pan_troglodytes
ENSTGUG00000004090	RC3H1	100	87.632	ENSPANG00000008886	RC3H1	100	87.632	Papio_anubis
ENSTGUG00000004090	RC3H1	100	88.938	ENSPSIG00000016181	RC3H1	100	88.938	Pelodiscus_sinensis
ENSTGUG00000004090	RC3H1	100	85.387	ENSPEMG00000011966	Rc3h1	100	85.475	Peromyscus_maniculatus_bairdii
ENSTGUG00000004090	RC3H1	71	86.957	ENSPCIG00000002058	RC3H1	95	97.982	Phascolarctos_cinereus
ENSTGUG00000004090	RC3H1	100	85.263	ENSPPYG00000000490	RC3H1	98	87.761	Pongo_abelii
ENSTGUG00000004090	RC3H1	81	92.105	ENSPCAG00000010775	RC3H1	87	92.105	Procavia_capensis
ENSTGUG00000004090	RC3H1	83	85.016	ENSPCOG00000021795	RC3H1	96	85.881	Propithecus_coquereli
ENSTGUG00000004090	RC3H1	100	79.262	ENSPVAG00000007593	RC3H1	100	79.982	Pteropus_vampyrus
ENSTGUG00000004090	RC3H1	97	60.721	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSTGUG00000004090	RC3H1	100	87.642	ENSRBIG00000037743	RC3H1	100	87.642	Rhinopithecus_bieti
ENSTGUG00000004090	RC3H1	100	87.632	ENSRROG00000036546	RC3H1	100	87.632	Rhinopithecus_roxellana
ENSTGUG00000004090	RC3H1	93	77.298	ENSSBOG00000010664	RC3H1	100	80.903	Saimiri_boliviensis_boliviensis
ENSTGUG00000004090	RC3H1	100	85.802	ENSSHAG00000007589	RC3H1	100	85.890	Sarcophilus_harrisii
ENSTGUG00000004090	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSTGUG00000004090	RC3H1	100	85.439	ENSSPUG00000018472	RC3H1	100	85.351	Sphenodon_punctatus
ENSTGUG00000004090	RC3H1	100	87.522	ENSSSCG00000015498	RC3H1	100	88.235	Sus_scrofa
ENSTGUG00000004090	RC3H1	89	90.122	ENSTBEG00000005015	RC3H1	89	90.676	Tupaia_belangeri
ENSTGUG00000004090	RC3H1	100	86.591	ENSTTRG00000008572	RC3H1	100	87.303	Tursiops_truncatus
ENSTGUG00000004090	RC3H1	100	86.467	ENSUAMG00000019525	RC3H1	100	87.182	Ursus_americanus
ENSTGUG00000004090	RC3H1	100	87.006	ENSUMAG00000020087	RC3H1	100	87.719	Ursus_maritimus
ENSTGUG00000004090	RC3H1	91	97.748	ENSVPAG00000002591	RC3H1	92	97.748	Vicugna_pacos
ENSTGUG00000004090	RC3H1	100	86.778	ENSVVUG00000014201	RC3H1	93	96.018	Vulpes_vulpes
ENSTGUG00000004090	RC3H1	100	77.913	ENSXETG00000020030	rc3h1	100	77.826	Xenopus_tropicalis