EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000004470 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 10951 bases
Position: chr25:1072294-1083244
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004597	RRM_1	PF00076.22	3.4e-40	1	2
ENSTGUP00000004597	RRM_1	PF00076.22	3.4e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004646	SF3B4-201	762	-	ENSTGUP00000004597	254 (aa)	-	H0Z207

Gene Model

Click here to download ENSTGUG00000004470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000004470	SF3B4	66	35.000	ENSTGUG00000017307	TIA1	54	34.409
ENSTGUG00000004470	SF3B4	52	30.000	ENSTGUG00000016423	-	91	31.469
ENSTGUG00000004470	SF3B4	60	31.507	ENSTGUG00000004447	RBM8A	52	31.507
ENSTGUG00000004470	SF3B4	74	38.095	ENSTGUG00000005114	PABPC1L	59	38.095
ENSTGUG00000004470	SF3B4	65	34.973	ENSTGUG00000011148	TIAL1	71	34.426
ENSTGUG00000004470	SF3B4	71	32.121	ENSTGUG00000008597	ELAVL4	88	32.121
ENSTGUG00000004470	SF3B4	71	36.986	ENSTGUG00000001349	ELAVL2	67	36.986
ENSTGUG00000004470	SF3B4	71	32.335	ENSTGUG00000000118	ELAVL1	94	32.727
ENSTGUG00000004470	SF3B4	57	30.137	ENSTGUG00000001168	HNRNPAB	55	30.137
ENSTGUG00000004470	SF3B4	71	39.344	ENSTGUG00000012067	PABPC1	57	39.344
ENSTGUG00000004470	SF3B4	54	31.884	ENSTGUG00000002850	HNRNPDL	53	30.201
ENSTGUG00000004470	SF3B4	64	33.333	ENSTGUG00000000884	CIRBP	58	32.990
ENSTGUG00000004470	SF3B4	71	40.984	ENSTGUG00000001266	PABPC4	55	40.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004470	SF3B4	90	98.246	ENSG00000143368	SF3B4	99	96.825	Homo_sapiens
ENSTGUG00000004470	SF3B4	91	98.261	ENSAPOG00000017647	sf3b4	59	97.034	Acanthochromis_polyacanthus
ENSTGUG00000004470	SF3B4	90	98.246	ENSAMEG00000010073	SF3B4	56	97.034	Ailuropoda_melanoleuca
ENSTGUG00000004470	SF3B4	91	96.957	ENSACIG00000018455	sf3b4	70	95.339	Amphilophus_citrinellus
ENSTGUG00000004470	SF3B4	89	98.678	ENSAOCG00000019801	sf3b4	59	96.610	Amphiprion_ocellaris
ENSTGUG00000004470	SF3B4	89	98.678	ENSAPEG00000010365	sf3b4	59	96.610	Amphiprion_percula
ENSTGUG00000004470	SF3B4	91	97.826	ENSATEG00000012844	sf3b4	60	94.628	Anabas_testudineus
ENSTGUG00000004470	SF3B4	100	95.669	ENSACAG00000010019	SF3B4	60	95.669	Anolis_carolinensis
ENSTGUG00000004470	SF3B4	90	98.246	ENSANAG00000031025	SF3B4	56	97.034	Aotus_nancymaae
ENSTGUG00000004470	SF3B4	93	95.781	ENSACLG00000014260	sf3b4	60	94.628	Astatotilapia_calliptera
ENSTGUG00000004470	SF3B4	91	97.826	ENSAMXG00000008282	sf3b4	60	94.628	Astyanax_mexicanus
ENSTGUG00000004470	SF3B4	80	96.535	ENSBTAG00000012793	-	52	95.238	Bos_taurus
ENSTGUG00000004470	SF3B4	90	98.246	ENSBTAG00000012495	SF3B4	56	97.034	Bos_taurus
ENSTGUG00000004470	SF3B4	85	81.395	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSTGUG00000004470	SF3B4	90	98.246	ENSCAFG00000011617	SF3B4	56	97.034	Canis_familiaris
ENSTGUG00000004470	SF3B4	90	98.246	ENSCAFG00020019775	SF3B4	56	97.034	Canis_lupus_dingo
ENSTGUG00000004470	SF3B4	79	74.627	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSTGUG00000004470	SF3B4	90	98.246	ENSCHIG00000025663	-	56	97.034	Capra_hircus
ENSTGUG00000004470	SF3B4	90	98.246	ENSTSYG00000009295	SF3B4	56	97.034	Carlito_syrichta
ENSTGUG00000004470	SF3B4	88	96.133	ENSCAPG00000006451	SF3B4	51	96.133	Cavia_aperea
ENSTGUG00000004470	SF3B4	90	98.246	ENSCPOG00000008267	SF3B4	56	97.034	Cavia_porcellus
ENSTGUG00000004470	SF3B4	90	97.368	ENSCCAG00000021751	-	53	96.186	Cebus_capucinus
ENSTGUG00000004470	SF3B4	85	87.037	ENSCCAG00000019823	-	50	87.678	Cebus_capucinus
ENSTGUG00000004470	SF3B4	90	98.246	ENSCATG00000033114	SF3B4	56	97.034	Cercocebus_atys
ENSTGUG00000004470	SF3B4	90	98.246	ENSCLAG00000015851	SF3B4	56	97.034	Chinchilla_lanigera
ENSTGUG00000004470	SF3B4	90	98.246	ENSCSAG00000018129	SF3B4	56	97.034	Chlorocebus_sabaeus
ENSTGUG00000004470	SF3B4	84	100.000	ENSCPBG00000008041	SF3B4	57	97.890	Chrysemys_picta_bellii
ENSTGUG00000004470	SF3B4	89	87.225	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSTGUG00000004470	SF3B4	82	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSTGUG00000004470	SF3B4	90	98.246	ENSCANG00000035579	SF3B4	56	97.034	Colobus_angolensis_palliatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSCGRG00001003590	Sf3b4	56	97.034	Cricetulus_griseus_chok1gshd
ENSTGUG00000004470	SF3B4	90	98.246	ENSCGRG00000016914	Sf3b4	56	97.034	Cricetulus_griseus_crigri
ENSTGUG00000004470	SF3B4	93	95.359	ENSCVAG00000005536	sf3b4	61	93.671	Cyprinodon_variegatus
ENSTGUG00000004470	SF3B4	91	98.696	ENSDARG00000018574	sf3b4	61	95.455	Danio_rerio
ENSTGUG00000004470	SF3B4	91	79.654	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSTGUG00000004470	SF3B4	87	92.727	ENSDNOG00000048908	-	53	93.694	Dasypus_novemcinctus
ENSTGUG00000004470	SF3B4	90	98.246	ENSDORG00000016366	Sf3b4	56	97.034	Dipodomys_ordii
ENSTGUG00000004470	SF3B4	87	86.425	FBgn0015818	Spx	61	88.152	Drosophila_melanogaster
ENSTGUG00000004470	SF3B4	90	88.158	ENSETEG00000008963	SF3B4	56	87.288	Echinops_telfairi
ENSTGUG00000004470	SF3B4	72	94.022	ENSEBUG00000011194	-	56	86.935	Eptatretus_burgeri
ENSTGUG00000004470	SF3B4	90	98.246	ENSEASG00005001477	SF3B4	56	97.034	Equus_asinus_asinus
ENSTGUG00000004470	SF3B4	90	98.246	ENSECAG00000024737	SF3B4	56	97.034	Equus_caballus
ENSTGUG00000004470	SF3B4	91	98.696	ENSELUG00000012876	sf3b4	59	97.458	Esox_lucius
ENSTGUG00000004470	SF3B4	90	98.246	ENSFCAG00000010106	SF3B4	56	97.034	Felis_catus
ENSTGUG00000004470	SF3B4	90	98.246	ENSFDAG00000009286	SF3B4	56	97.034	Fukomys_damarensis
ENSTGUG00000004470	SF3B4	91	96.957	ENSGMOG00000002519	sf3b4	68	95.708	Gadus_morhua
ENSTGUG00000004470	SF3B4	100	96.063	ENSGALG00000013352	SF3B4	60	96.063	Gallus_gallus
ENSTGUG00000004470	SF3B4	90	98.253	ENSGAFG00000010181	sf3b4	60	96.203	Gambusia_affinis
ENSTGUG00000004470	SF3B4	89	98.678	ENSGACG00000003819	sf3b4	60	96.203	Gasterosteus_aculeatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSGGOG00000004761	SF3B4	56	97.034	Gorilla_gorilla
ENSTGUG00000004470	SF3B4	84	88.318	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSTGUG00000004470	SF3B4	93	95.781	ENSHBUG00000002028	sf3b4	60	94.628	Haplochromis_burtoni
ENSTGUG00000004470	SF3B4	90	98.246	ENSHGLG00000012360	SF3B4	56	97.034	Heterocephalus_glaber_female
ENSTGUG00000004470	SF3B4	90	98.246	ENSHGLG00100008533	SF3B4	56	97.034	Heterocephalus_glaber_male
ENSTGUG00000004470	SF3B4	84	99.531	ENSHCOG00000003014	sf3b4	61	92.623	Hippocampus_comes
ENSTGUG00000004470	SF3B4	91	98.696	ENSIPUG00000012242	Sf3b4	61	95.455	Ictalurus_punctatus
ENSTGUG00000004470	SF3B4	97	71.660	ENSSTOG00000029627	-	52	75.109	Ictidomys_tridecemlineatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSSTOG00000000684	-	56	97.034	Ictidomys_tridecemlineatus
ENSTGUG00000004470	SF3B4	86	73.643	ENSJJAG00000022500	Sf3b4	57	71.329	Jaculus_jaculus
ENSTGUG00000004470	SF3B4	93	96.203	ENSKMAG00000008154	sf3b4	62	95.041	Kryptolebias_marmoratus
ENSTGUG00000004470	SF3B4	92	97.854	ENSLBEG00000026818	sf3b4	59	97.458	Labrus_bergylta
ENSTGUG00000004470	SF3B4	90	97.807	ENSLACG00000004436	SF3B4	65	96.203	Latimeria_chalumnae
ENSTGUG00000004470	SF3B4	91	98.276	ENSLOCG00000009048	sf3b4	56	97.046	Lepisosteus_oculatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSLAFG00000008531	SF3B4	56	97.034	Loxodonta_africana
ENSTGUG00000004470	SF3B4	85	79.167	ENSMFAG00000039067	-	60	78.924	Macaca_fascicularis
ENSTGUG00000004470	SF3B4	90	98.246	ENSMFAG00000042395	SF3B4	56	97.034	Macaca_fascicularis
ENSTGUG00000004470	SF3B4	90	98.246	ENSMMUG00000007256	SF3B4	56	97.034	Macaca_mulatta
ENSTGUG00000004470	SF3B4	85	78.704	ENSMNEG00000031526	-	60	78.475	Macaca_nemestrina
ENSTGUG00000004470	SF3B4	90	98.246	ENSMNEG00000031839	SF3B4	56	97.034	Macaca_nemestrina
ENSTGUG00000004470	SF3B4	90	98.246	ENSMLEG00000038667	SF3B4	56	97.034	Mandrillus_leucophaeus
ENSTGUG00000004470	SF3B4	93	95.781	ENSMAMG00000014692	sf3b4	59	96.186	Mastacembelus_armatus
ENSTGUG00000004470	SF3B4	93	95.781	ENSMZEG00005026741	sf3b4	60	94.628	Maylandia_zebra
ENSTGUG00000004470	SF3B4	100	96.063	ENSMGAG00000000653	SF3B4	61	96.063	Meleagris_gallopavo
ENSTGUG00000004470	SF3B4	90	98.246	ENSMAUG00000015266	Sf3b4	56	97.034	Mesocricetus_auratus
ENSTGUG00000004470	SF3B4	90	98.246	ENSMICG00000044961	SF3B4	56	97.034	Microcebus_murinus
ENSTGUG00000004470	SF3B4	90	98.246	ENSMOCG00000013658	-	56	97.034	Microtus_ochrogaster
ENSTGUG00000004470	SF3B4	81	98.049	ENSMOCG00000014155	-	56	94.714	Microtus_ochrogaster
ENSTGUG00000004470	SF3B4	91	98.696	ENSMMOG00000018032	sf3b4	60	97.458	Mola_mola
ENSTGUG00000004470	SF3B4	90	98.246	ENSMODG00000018767	SF3B4	56	97.034	Monodelphis_domestica
ENSTGUG00000004470	SF3B4	89	98.238	ENSMALG00000006174	sf3b4	59	95.781	Monopterus_albus
ENSTGUG00000004470	SF3B4	90	98.246	MGP_CAROLIEiJ_G0025365	Sf3b4	56	97.034	Mus_caroli
ENSTGUG00000004470	SF3B4	90	98.246	ENSMUSG00000068856	Sf3b4	56	97.034	Mus_musculus
ENSTGUG00000004470	SF3B4	90	98.246	MGP_PahariEiJ_G0026809	Sf3b4	56	97.034	Mus_pahari
ENSTGUG00000004470	SF3B4	90	98.246	MGP_SPRETEiJ_G0026309	Sf3b4	56	97.034	Mus_spretus
ENSTGUG00000004470	SF3B4	90	98.246	ENSMPUG00000005563	SF3B4	56	97.034	Mustela_putorius_furo
ENSTGUG00000004470	SF3B4	90	98.246	ENSMLUG00000010789	SF3B4	56	97.034	Myotis_lucifugus
ENSTGUG00000004470	SF3B4	90	98.246	ENSNGAG00000016337	Sf3b4	56	97.034	Nannospalax_galili
ENSTGUG00000004470	SF3B4	93	96.610	ENSNBRG00000013865	sf3b4	60	95.041	Neolamprologus_brichardi
ENSTGUG00000004470	SF3B4	83	90.094	ENSNLEG00000000537	-	60	87.712	Nomascus_leucogenys
ENSTGUG00000004470	SF3B4	90	93.860	ENSOPRG00000010808	SF3B4	56	92.797	Ochotona_princeps
ENSTGUG00000004470	SF3B4	90	81.223	ENSODEG00000003597	-	58	80.591	Octodon_degus
ENSTGUG00000004470	SF3B4	93	72.034	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSTGUG00000004470	SF3B4	93	95.781	ENSONIG00000002730	sf3b4	60	94.628	Oreochromis_niloticus
ENSTGUG00000004470	SF3B4	94	75.309	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSTGUG00000004470	SF3B4	61	58.974	ENSOANG00000020581	-	99	58.974	Ornithorhynchus_anatinus
ENSTGUG00000004470	SF3B4	90	98.246	ENSOCUG00000004614	SF3B4	56	97.034	Oryctolagus_cuniculus
ENSTGUG00000004470	SF3B4	91	97.845	ENSORLG00000003062	sf3b4	61	97.034	Oryzias_latipes
ENSTGUG00000004470	SF3B4	91	97.845	ENSORLG00020000687	sf3b4	59	97.034	Oryzias_latipes_hni
ENSTGUG00000004470	SF3B4	91	97.845	ENSORLG00015010989	sf3b4	59	97.034	Oryzias_latipes_hsok
ENSTGUG00000004470	SF3B4	91	97.845	ENSOMEG00000013694	sf3b4	59	97.034	Oryzias_melastigma
ENSTGUG00000004470	SF3B4	90	98.246	ENSOGAG00000006265	SF3B4	56	97.034	Otolemur_garnettii
ENSTGUG00000004470	SF3B4	91	79.325	ENSOARG00000007368	-	58	79.325	Ovis_aries
ENSTGUG00000004470	SF3B4	90	98.246	ENSOARG00000020718	-	56	97.034	Ovis_aries
ENSTGUG00000004470	SF3B4	96	79.087	ENSPPAG00000030024	-	58	86.864	Pan_paniscus
ENSTGUG00000004470	SF3B4	90	98.246	ENSPPAG00000040904	SF3B4	56	97.034	Pan_paniscus
ENSTGUG00000004470	SF3B4	90	98.246	ENSPPRG00000007384	SF3B4	56	97.034	Panthera_pardus
ENSTGUG00000004470	SF3B4	90	98.246	ENSPTIG00000014530	SF3B4	56	97.034	Panthera_tigris_altaica
ENSTGUG00000004470	SF3B4	90	98.246	ENSPTRG00000001243	SF3B4	56	97.034	Pan_troglodytes
ENSTGUG00000004470	SF3B4	96	79.468	ENSPTRG00000049727	-	59	87.288	Pan_troglodytes
ENSTGUG00000004470	SF3B4	90	98.246	ENSPANG00000005126	SF3B4	56	97.034	Papio_anubis
ENSTGUG00000004470	SF3B4	91	98.276	ENSPKIG00000020669	sf3b4	63	97.046	Paramormyrops_kingsleyae
ENSTGUG00000004470	SF3B4	75	97.906	ENSPSIG00000009565	SF3B4	71	97.409	Pelodiscus_sinensis
ENSTGUG00000004470	SF3B4	59	77.907	ENSPMGG00000023148	-	96	77.907	Periophthalmus_magnuspinnatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSPEMG00000017568	Sf3b4	56	97.034	Peromyscus_maniculatus_bairdii
ENSTGUG00000004470	SF3B4	84	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSTGUG00000004470	SF3B4	90	98.246	ENSPCIG00000008765	SF3B4	56	97.034	Phascolarctos_cinereus
ENSTGUG00000004470	SF3B4	93	95.359	ENSPFOG00000005754	sf3b4	61	94.215	Poecilia_formosa
ENSTGUG00000004470	SF3B4	93	95.763	ENSPLAG00000001401	sf3b4	67	94.215	Poecilia_latipinna
ENSTGUG00000004470	SF3B4	93	96.186	ENSPREG00000011076	sf3b4	60	95.021	Poecilia_reticulata
ENSTGUG00000004470	SF3B4	82	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSTGUG00000004470	SF3B4	90	98.246	ENSPCOG00000015399	SF3B4	56	97.034	Propithecus_coquereli
ENSTGUG00000004470	SF3B4	90	98.246	ENSPVAG00000014171	SF3B4	56	97.034	Pteropus_vampyrus
ENSTGUG00000004470	SF3B4	93	95.781	ENSPNYG00000012700	sf3b4	60	94.628	Pundamilia_nyererei
ENSTGUG00000004470	SF3B4	91	98.261	ENSPNAG00000000686	sf3b4	60	97.034	Pygocentrus_nattereri
ENSTGUG00000004470	SF3B4	90	98.246	ENSRNOG00000021181	Sf3b4	56	97.034	Rattus_norvegicus
ENSTGUG00000004470	SF3B4	90	98.246	ENSRBIG00000043392	SF3B4	56	97.034	Rhinopithecus_bieti
ENSTGUG00000004470	SF3B4	88	73.991	ENSRROG00000028213	-	58	74.123	Rhinopithecus_roxellana
ENSTGUG00000004470	SF3B4	90	98.246	ENSRROG00000029366	SF3B4	56	97.034	Rhinopithecus_roxellana
ENSTGUG00000004470	SF3B4	72	37.949	YOR319W	-	91	37.949	Saccharomyces_cerevisiae
ENSTGUG00000004470	SF3B4	90	97.807	ENSSBOG00000012310	-	56	96.610	Saimiri_boliviensis_boliviensis
ENSTGUG00000004470	SF3B4	92	75.641	ENSSBOG00000025174	-	50	75.641	Saimiri_boliviensis_boliviensis
ENSTGUG00000004470	SF3B4	90	93.421	ENSSHAG00000004043	SF3B4	55	92.373	Sarcophilus_harrisii
ENSTGUG00000004470	SF3B4	93	96.203	ENSSFOG00015008864	sf3b4	58	96.203	Scleropages_formosus
ENSTGUG00000004470	SF3B4	83	100.000	ENSSMAG00000006837	sf3b4	59	97.034	Scophthalmus_maximus
ENSTGUG00000004470	SF3B4	90	98.253	ENSSDUG00000012064	sf3b4	59	96.610	Seriola_dumerili
ENSTGUG00000004470	SF3B4	90	98.690	ENSSLDG00000014226	sf3b4	59	97.034	Seriola_lalandi_dorsalis
ENSTGUG00000004470	SF3B4	97	86.861	ENSSPUG00000001028	SF3B4	69	86.861	Sphenodon_punctatus
ENSTGUG00000004470	SF3B4	91	98.261	ENSSPAG00000019219	sf3b4	59	97.034	Stegastes_partitus
ENSTGUG00000004470	SF3B4	90	98.246	ENSSSCG00000006665	-	56	97.034	Sus_scrofa
ENSTGUG00000004470	SF3B4	93	63.559	ENSSSCG00000039440	-	58	63.559	Sus_scrofa
ENSTGUG00000004470	SF3B4	89	97.357	ENSTRUG00000004516	sf3b4	59	95.763	Takifugu_rubripes
ENSTGUG00000004470	SF3B4	91	97.826	ENSTNIG00000009156	sf3b4	60	96.610	Tetraodon_nigroviridis
ENSTGUG00000004470	SF3B4	90	98.246	ENSTTRG00000005217	SF3B4	56	97.034	Tursiops_truncatus
ENSTGUG00000004470	SF3B4	90	98.246	ENSUAMG00000022468	SF3B4	56	97.034	Ursus_americanus
ENSTGUG00000004470	SF3B4	90	98.246	ENSUMAG00000003802	SF3B4	56	97.034	Ursus_maritimus
ENSTGUG00000004470	SF3B4	85	98.148	ENSVPAG00000008152	SF3B4	54	96.875	Vicugna_pacos
ENSTGUG00000004470	SF3B4	90	98.246	ENSVVUG00000007732	-	60	97.034	Vulpes_vulpes
ENSTGUG00000004470	SF3B4	80	100.000	ENSXETG00000011038	sf3b4	64	90.000	Xenopus_tropicalis
ENSTGUG00000004470	SF3B4	90	98.253	ENSXCOG00000019895	sf3b4	61	96.203	Xiphophorus_couchianus
ENSTGUG00000004470	SF3B4	90	98.253	ENSXMAG00000003772	sf3b4	61	96.203	Xiphophorus_maculatus