EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000004562 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 125852 bases
Position: chr14:4376135-4501986
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004720	Fox-1_C	PF12414.8	1.9e-43	1	1
ENSTGUP00000004720	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004769	RBFOX1-201	1167	-	ENSTGUP00000004720	389 (aa)	-	H0Z2C9

Gene Model

Click here to download ENSTGUG00000004562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000004562	RBFOX1	100	65.347	ENSTGUG00000010808	RBFOX2	100	65.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004562	RBFOX1	100	94.859	ENSG00000078328	RBFOX1	98	94.602	Homo_sapiens
ENSTGUG00000004562	RBFOX1	100	77.641	ENSAPOG00000003197	rbfox1	98	77.150	Acanthochromis_polyacanthus
ENSTGUG00000004562	RBFOX1	57	92.793	ENSAMEG00000008605	RBFOX1	89	92.793	Ailuropoda_melanoleuca
ENSTGUG00000004562	RBFOX1	69	64.865	ENSACIG00000005478	rbfox1	68	64.865	Amphilophus_citrinellus
ENSTGUG00000004562	RBFOX1	74	71.661	ENSAOCG00000008283	rbfox1	96	71.336	Amphiprion_ocellaris
ENSTGUG00000004562	RBFOX1	97	70.185	ENSAPEG00000010636	rbfox1	100	70.079	Amphiprion_percula
ENSTGUG00000004562	RBFOX1	74	70.550	ENSATEG00000007513	rbfox1	96	70.227	Anabas_testudineus
ENSTGUG00000004562	RBFOX1	100	99.486	ENSAPLG00000013263	RBFOX1	97	99.486	Anas_platyrhynchos
ENSTGUG00000004562	RBFOX1	100	89.796	ENSACAG00000004013	RBFOX1	98	89.796	Anolis_carolinensis
ENSTGUG00000004562	RBFOX1	100	92.821	ENSANAG00000029527	RBFOX1	98	92.821	Aotus_nancymaae
ENSTGUG00000004562	RBFOX1	57	89.238	ENSAMXG00000002431	rbfox1	71	80.876	Astyanax_mexicanus
ENSTGUG00000004562	RBFOX1	100	92.308	ENSBTAG00000007210	RBFOX1	98	92.308	Bos_taurus
ENSTGUG00000004562	RBFOX1	100	94.859	ENSCJAG00000017351	RBFOX1	93	94.859	Callithrix_jacchus
ENSTGUG00000004562	RBFOX1	100	93.077	ENSCAFG00000019082	RBFOX1	93	93.077	Canis_familiaris
ENSTGUG00000004562	RBFOX1	69	95.149	ENSCAFG00020024881	RBFOX1	75	95.149	Canis_lupus_dingo
ENSTGUG00000004562	RBFOX1	100	92.821	ENSCHIG00000023549	RBFOX1	98	92.821	Capra_hircus
ENSTGUG00000004562	RBFOX1	99	92.545	ENSTSYG00000005334	RBFOX1	100	92.545	Carlito_syrichta
ENSTGUG00000004562	RBFOX1	99	94.330	ENSCAPG00000017669	RBFOX1	100	94.330	Cavia_aperea
ENSTGUG00000004562	RBFOX1	100	94.087	ENSCPOG00000011314	RBFOX1	99	94.087	Cavia_porcellus
ENSTGUG00000004562	RBFOX1	100	92.821	ENSCCAG00000023031	RBFOX1	93	92.821	Cebus_capucinus
ENSTGUG00000004562	RBFOX1	100	92.821	ENSCATG00000033816	RBFOX1	93	92.821	Cercocebus_atys
ENSTGUG00000004562	RBFOX1	100	94.344	ENSCLAG00000012761	RBFOX1	98	94.087	Chinchilla_lanigera
ENSTGUG00000004562	RBFOX1	85	93.353	ENSCSAG00000008739	RBFOX1	88	93.353	Chlorocebus_sabaeus
ENSTGUG00000004562	RBFOX1	100	70.769	ENSCHOG00000012843	RBFOX1	93	70.769	Choloepus_hoffmanni
ENSTGUG00000004562	RBFOX1	99	99.485	ENSCPBG00000026626	RBFOX1	98	97.436	Chrysemys_picta_bellii
ENSTGUG00000004562	RBFOX1	100	92.821	ENSCANG00000033125	RBFOX1	93	92.821	Colobus_angolensis_palliatus
ENSTGUG00000004562	RBFOX1	100	93.573	ENSCGRG00001013729	Rbfox1	98	93.573	Cricetulus_griseus_chok1gshd
ENSTGUG00000004562	RBFOX1	100	93.573	ENSCGRG00000003272	Rbfox1	98	93.573	Cricetulus_griseus_crigri
ENSTGUG00000004562	RBFOX1	97	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSTGUG00000004562	RBFOX1	100	83.077	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSTGUG00000004562	RBFOX1	100	95.116	ENSDNOG00000043612	RBFOX1	94	95.116	Dasypus_novemcinctus
ENSTGUG00000004562	RBFOX1	100	92.092	ENSDORG00000010024	Rbfox1	97	91.837	Dipodomys_ordii
ENSTGUG00000004562	RBFOX1	100	73.846	ENSETEG00000003771	RBFOX1	93	73.846	Echinops_telfairi
ENSTGUG00000004562	RBFOX1	100	95.116	ENSEASG00005011599	RBFOX1	98	93.077	Equus_asinus_asinus
ENSTGUG00000004562	RBFOX1	100	92.821	ENSECAG00000012667	RBFOX1	91	92.838	Equus_caballus
ENSTGUG00000004562	RBFOX1	84	69.767	ENSELUG00000013096	rbfox1	97	69.767	Esox_lucius
ENSTGUG00000004562	RBFOX1	100	94.859	ENSFCAG00000025322	RBFOX1	89	94.859	Felis_catus
ENSTGUG00000004562	RBFOX1	83	100.000	ENSFALG00000004027	RBFOX1	97	100.000	Ficedula_albicollis
ENSTGUG00000004562	RBFOX1	100	94.344	ENSFDAG00000007388	RBFOX1	98	94.344	Fukomys_damarensis
ENSTGUG00000004562	RBFOX1	100	96.667	ENSGALG00000034325	RBFOX1	93	96.667	Gallus_gallus
ENSTGUG00000004562	RBFOX1	100	96.923	ENSGAGG00000023681	RBFOX1	100	99.204	Gopherus_agassizii
ENSTGUG00000004562	RBFOX1	100	92.821	ENSGGOG00000016871	-	98	89.948	Gorilla_gorilla
ENSTGUG00000004562	RBFOX1	100	94.344	ENSHGLG00000016944	RBFOX1	98	94.087	Heterocephalus_glaber_female
ENSTGUG00000004562	RBFOX1	100	94.344	ENSHGLG00100003272	RBFOX1	98	94.087	Heterocephalus_glaber_male
ENSTGUG00000004562	RBFOX1	87	70.605	ENSHCOG00000016419	rbfox1	91	70.605	Hippocampus_comes
ENSTGUG00000004562	RBFOX1	97	85.411	ENSIPUG00000015215	rbfox1	100	85.411	Ictalurus_punctatus
ENSTGUG00000004562	RBFOX1	100	93.830	ENSSTOG00000000322	RBFOX1	99	93.316	Ictidomys_tridecemlineatus
ENSTGUG00000004562	RBFOX1	100	91.517	ENSJJAG00000002575	Rbfox1	98	91.260	Jaculus_jaculus
ENSTGUG00000004562	RBFOX1	99	74.747	ENSLBEG00000014659	rbfox1	98	74.495	Labrus_bergylta
ENSTGUG00000004562	RBFOX1	100	90.051	ENSLOCG00000006675	rbfox1	98	90.051	Lepisosteus_oculatus
ENSTGUG00000004562	RBFOX1	79	96.104	ENSLAFG00000011480	RBFOX1	100	96.104	Loxodonta_africana
ENSTGUG00000004562	RBFOX1	100	93.077	ENSMFAG00000036447	RBFOX1	96	90.206	Macaca_fascicularis
ENSTGUG00000004562	RBFOX1	99	95.052	ENSMMUG00000003458	RBFOX1	97	95.052	Macaca_mulatta
ENSTGUG00000004562	RBFOX1	100	93.077	ENSMNEG00000032034	RBFOX1	93	93.077	Macaca_nemestrina
ENSTGUG00000004562	RBFOX1	100	92.821	ENSMLEG00000015382	RBFOX1	93	92.821	Mandrillus_leucophaeus
ENSTGUG00000004562	RBFOX1	97	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSTGUG00000004562	RBFOX1	72	92.171	ENSMGAG00000008606	RBFOX1	95	92.029	Meleagris_gallopavo
ENSTGUG00000004562	RBFOX1	98	55.497	ENSMAUG00000020570	Rbfox1	95	54.188	Mesocricetus_auratus
ENSTGUG00000004562	RBFOX1	100	88.175	ENSMICG00000034286	RBFOX1	97	88.175	Microcebus_murinus
ENSTGUG00000004562	RBFOX1	100	93.573	ENSMOCG00000020932	Rbfox1	100	93.750	Microtus_ochrogaster
ENSTGUG00000004562	RBFOX1	88	71.884	ENSMMOG00000009716	rbfox1	86	72.271	Mola_mola
ENSTGUG00000004562	RBFOX1	82	95.611	ENSMODG00000005826	RBFOX1	90	95.611	Monodelphis_domestica
ENSTGUG00000004562	RBFOX1	100	77.057	ENSMALG00000003337	rbfox1	98	76.808	Monopterus_albus
ENSTGUG00000004562	RBFOX1	100	93.830	MGP_CAROLIEiJ_G0020427	Rbfox1	98	93.830	Mus_caroli
ENSTGUG00000004562	RBFOX1	100	93.573	ENSMUSG00000008658	Rbfox1	98	93.814	Mus_musculus
ENSTGUG00000004562	RBFOX1	100	93.830	MGP_PahariEiJ_G0016135	Rbfox1	98	93.830	Mus_pahari
ENSTGUG00000004562	RBFOX1	100	93.316	MGP_SPRETEiJ_G0021321	Rbfox1	98	93.316	Mus_spretus
ENSTGUG00000004562	RBFOX1	85	93.353	ENSMPUG00000014822	RBFOX1	84	93.353	Mustela_putorius_furo
ENSTGUG00000004562	RBFOX1	79	96.091	ENSMLUG00000015896	RBFOX1	100	96.091	Myotis_lucifugus
ENSTGUG00000004562	RBFOX1	99	94.588	ENSNGAG00000023276	Rbfox1	100	94.588	Nannospalax_galili
ENSTGUG00000004562	RBFOX1	100	61.353	ENSNBRG00000011084	rbfox1	94	61.353	Neolamprologus_brichardi
ENSTGUG00000004562	RBFOX1	100	92.564	ENSNLEG00000010017	-	93	92.564	Nomascus_leucogenys
ENSTGUG00000004562	RBFOX1	99	77.892	ENSMEUG00000012525	RBFOX1	93	77.892	Notamacropus_eugenii
ENSTGUG00000004562	RBFOX1	100	73.846	ENSOPRG00000006199	-	93	73.846	Ochotona_princeps
ENSTGUG00000004562	RBFOX1	100	94.087	ENSODEG00000013166	RBFOX1	98	94.087	Octodon_degus
ENSTGUG00000004562	RBFOX1	85	95.468	ENSOANG00000002379	RBFOX1	88	95.468	Ornithorhynchus_anatinus
ENSTGUG00000004562	RBFOX1	56	94.009	ENSOCUG00000001205	-	96	94.009	Oryctolagus_cuniculus
ENSTGUG00000004562	RBFOX1	100	94.344	ENSOGAG00000025535	RBFOX1	98	94.344	Otolemur_garnettii
ENSTGUG00000004562	RBFOX1	62	82.716	ENSOARG00000005135	RBFOX1	96	82.716	Ovis_aries
ENSTGUG00000004562	RBFOX1	99	94.845	ENSPPAG00000036238	-	100	94.845	Pan_paniscus
ENSTGUG00000004562	RBFOX1	100	92.821	ENSPPRG00000006546	RBFOX1	93	92.821	Panthera_pardus
ENSTGUG00000004562	RBFOX1	99	83.505	ENSPTIG00000021154	RBFOX1	99	82.519	Panthera_tigris_altaica
ENSTGUG00000004562	RBFOX1	100	92.821	ENSPTRG00000007744	RBFOX1	98	89.948	Pan_troglodytes
ENSTGUG00000004562	RBFOX1	100	92.821	ENSPANG00000026500	RBFOX1	93	92.821	Papio_anubis
ENSTGUG00000004562	RBFOX1	75	85.567	ENSPKIG00000019353	rbfox1	86	85.517	Paramormyrops_kingsleyae
ENSTGUG00000004562	RBFOX1	100	85.166	ENSPKIG00000009667	-	95	85.326	Paramormyrops_kingsleyae
ENSTGUG00000004562	RBFOX1	100	99.486	ENSPSIG00000006523	RBFOX1	97	99.486	Pelodiscus_sinensis
ENSTGUG00000004562	RBFOX1	100	93.830	ENSPEMG00000017607	Rbfox1	98	93.830	Peromyscus_maniculatus_bairdii
ENSTGUG00000004562	RBFOX1	75	93.448	ENSPCIG00000026887	RBFOX1	100	93.448	Phascolarctos_cinereus
ENSTGUG00000004562	RBFOX1	85	93.353	ENSPPYG00000007079	-	84	93.353	Pongo_abelii
ENSTGUG00000004562	RBFOX1	90	84.286	ENSPCAG00000002630	RBFOX1	93	84.286	Procavia_capensis
ENSTGUG00000004562	RBFOX1	100	92.308	ENSPCOG00000025687	RBFOX1	93	92.308	Propithecus_coquereli
ENSTGUG00000004562	RBFOX1	100	88.205	ENSPVAG00000013467	RBFOX1	93	88.205	Pteropus_vampyrus
ENSTGUG00000004562	RBFOX1	97	82.323	ENSPNAG00000023109	rbfox1	100	82.323	Pygocentrus_nattereri
ENSTGUG00000004562	RBFOX1	100	93.830	ENSRNOG00000002827	Rbfox1	93	93.830	Rattus_norvegicus
ENSTGUG00000004562	RBFOX1	99	94.845	ENSRBIG00000044478	RBFOX1	100	94.845	Rhinopithecus_bieti
ENSTGUG00000004562	RBFOX1	100	92.821	ENSRROG00000044411	RBFOX1	93	92.821	Rhinopithecus_roxellana
ENSTGUG00000004562	RBFOX1	100	94.859	ENSSBOG00000033726	RBFOX1	97	94.859	Saimiri_boliviensis_boliviensis
ENSTGUG00000004562	RBFOX1	99	93.299	ENSSHAG00000009257	RBFOX1	98	93.299	Sarcophilus_harrisii
ENSTGUG00000004562	RBFOX1	90	73.109	ENSSFOG00015009955	-	83	73.109	Scleropages_formosus
ENSTGUG00000004562	RBFOX1	100	69.466	ENSSFOG00015023675	rbfox1	97	69.466	Scleropages_formosus
ENSTGUG00000004562	RBFOX1	100	77.340	ENSSMAG00000015505	rbfox1	92	77.094	Scophthalmus_maximus
ENSTGUG00000004562	RBFOX1	100	75.064	ENSSDUG00000016413	rbfox1	99	74.809	Seriola_dumerili
ENSTGUG00000004562	RBFOX1	87	72.647	ENSSLDG00000009353	rbfox1	95	72.256	Seriola_lalandi_dorsalis
ENSTGUG00000004562	RBFOX1	87	85.588	ENSSPUG00000009732	RBFOX1	87	85.588	Sphenodon_punctatus
ENSTGUG00000004562	RBFOX1	99	77.094	ENSSPAG00000009723	rbfox1	100	76.847	Stegastes_partitus
ENSTGUG00000004562	RBFOX1	97	94.415	ENSSSCG00000007917	RBFOX1	91	94.415	Sus_scrofa
ENSTGUG00000004562	RBFOX1	100	76.790	ENSTRUG00000020940	rbfox1	99	76.790	Takifugu_rubripes
ENSTGUG00000004562	RBFOX1	69	57.643	ENSTNIG00000002567	rbfox1	100	59.236	Tetraodon_nigroviridis
ENSTGUG00000004562	RBFOX1	79	71.104	ENSTBEG00000009169	-	74	71.104	Tupaia_belangeri
ENSTGUG00000004562	RBFOX1	100	92.308	ENSTTRG00000005700	RBFOX1	93	92.308	Tursiops_truncatus
ENSTGUG00000004562	RBFOX1	99	88.689	ENSUAMG00000024633	RBFOX1	97	90.576	Ursus_americanus
ENSTGUG00000004562	RBFOX1	99	80.977	ENSUMAG00000003579	RBFOX1	97	81.675	Ursus_maritimus
ENSTGUG00000004562	RBFOX1	79	93.182	ENSVPAG00000001284	RBFOX1	74	93.182	Vicugna_pacos
ENSTGUG00000004562	RBFOX1	100	95.116	ENSVVUG00000017311	RBFOX1	89	95.116	Vulpes_vulpes