EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000004792 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 4147 bases
Position: chr11:4157932-4162078
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004926	HVSL	PF09749.9	7.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004975	USB1-201	1419	-	ENSTGUP00000004926	255 (aa)	-	H0Z2Y4

Gene Model

Click here to download ENSTGUG00000004792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004792	USB1	87	68.018	ENSG00000103005	USB1	99	69.340	Homo_sapiens
ENSTGUG00000004792	USB1	98	47.842	ENSAPOG00000011942	usb1	99	45.683	Acanthochromis_polyacanthus
ENSTGUG00000004792	USB1	99	59.108	ENSAMEG00000017205	USB1	78	66.507	Ailuropoda_melanoleuca
ENSTGUG00000004792	USB1	98	48.905	ENSACIG00000012234	usb1	99	48.905	Amphilophus_citrinellus
ENSTGUG00000004792	USB1	87	54.955	ENSAOCG00000014831	usb1	74	56.398	Amphiprion_ocellaris
ENSTGUG00000004792	USB1	87	55.405	ENSAPEG00000000296	usb1	74	56.872	Amphiprion_percula
ENSTGUG00000004792	USB1	93	51.587	ENSATEG00000009348	usb1	75	56.132	Anabas_testudineus
ENSTGUG00000004792	USB1	80	84.878	ENSAPLG00000002756	USB1	94	83.099	Anas_platyrhynchos
ENSTGUG00000004792	USB1	83	69.194	ENSACAG00000015481	USB1	92	69.194	Anolis_carolinensis
ENSTGUG00000004792	USB1	87	68.018	ENSANAG00000035640	USB1	80	69.340	Aotus_nancymaae
ENSTGUG00000004792	USB1	87	51.802	ENSACLG00000020586	usb1	75	53.081	Astatotilapia_calliptera
ENSTGUG00000004792	USB1	89	53.744	ENSAMXG00000040146	usb1	70	56.190	Astyanax_mexicanus
ENSTGUG00000004792	USB1	99	63.774	ENSBTAG00000015758	USB1	80	68.868	Bos_taurus
ENSTGUG00000004792	USB1	87	68.919	ENSCJAG00000011733	USB1	80	70.283	Callithrix_jacchus
ENSTGUG00000004792	USB1	82	68.095	ENSCAFG00000008556	USB1	56	68.750	Canis_familiaris
ENSTGUG00000004792	USB1	99	61.509	ENSCAFG00020009263	USB1	79	68.095	Canis_lupus_dingo
ENSTGUG00000004792	USB1	99	61.423	ENSCHIG00000024290	USB1	79	68.421	Capra_hircus
ENSTGUG00000004792	USB1	87	64.783	ENSTSYG00000006997	USB1	79	69.378	Carlito_syrichta
ENSTGUG00000004792	USB1	82	55.238	ENSCAPG00000009057	USB1	90	55.238	Cavia_aperea
ENSTGUG00000004792	USB1	99	59.245	ENSCPOG00000014325	USB1	79	67.619	Cavia_porcellus
ENSTGUG00000004792	USB1	87	68.018	ENSCCAG00000022132	USB1	80	69.340	Cebus_capucinus
ENSTGUG00000004792	USB1	99	63.396	ENSCATG00000032174	USB1	80	70.283	Cercocebus_atys
ENSTGUG00000004792	USB1	69	65.714	ENSCLAG00000007363	USB1	91	67.500	Chinchilla_lanigera
ENSTGUG00000004792	USB1	87	68.919	ENSCSAG00000004783	USB1	80	70.283	Chlorocebus_sabaeus
ENSTGUG00000004792	USB1	88	74.667	ENSCPBG00000026943	USB1	75	77.990	Chrysemys_picta_bellii
ENSTGUG00000004792	USB1	87	69.369	ENSCANG00000037135	USB1	80	70.755	Colobus_angolensis_palliatus
ENSTGUG00000004792	USB1	99	62.313	ENSCGRG00001011243	USB1	78	69.856	Cricetulus_griseus_chok1gshd
ENSTGUG00000004792	USB1	99	62.313	ENSCGRG00000013252	USB1	78	69.856	Cricetulus_griseus_crigri
ENSTGUG00000004792	USB1	98	47.253	ENSCSEG00000013881	usb1	76	54.028	Cynoglossus_semilaevis
ENSTGUG00000004792	USB1	81	54.589	ENSCVAG00000009252	usb1	91	53.521	Cyprinodon_variegatus
ENSTGUG00000004792	USB1	83	54.028	ENSDARG00000003841	usb1	76	54.028	Danio_rerio
ENSTGUG00000004792	USB1	87	66.216	ENSDORG00000001888	Usb1	80	67.453	Dipodomys_ordii
ENSTGUG00000004792	USB1	98	37.643	FBgn0037713	CG16790	83	38.636	Drosophila_melanogaster
ENSTGUG00000004792	USB1	99	52.434	ENSETEG00000019682	USB1	79	55.660	Echinops_telfairi
ENSTGUG00000004792	USB1	98	46.400	ENSEBUG00000005889	usb1	74	49.763	Eptatretus_burgeri
ENSTGUG00000004792	USB1	99	61.887	ENSEASG00005005484	USB1	80	67.925	Equus_asinus_asinus
ENSTGUG00000004792	USB1	99	62.879	ENSECAG00000019493	USB1	73	69.194	Equus_caballus
ENSTGUG00000004792	USB1	69	61.143	ENSEEUG00000000154	USB1	60	61.250	Erinaceus_europaeus
ENSTGUG00000004792	USB1	83	54.502	ENSELUG00000010974	usb1	77	54.502	Esox_lucius
ENSTGUG00000004792	USB1	90	61.789	ENSFCAG00000002693	USB1	78	68.900	Felis_catus
ENSTGUG00000004792	USB1	100	86.842	ENSFALG00000006876	USB1	82	95.872	Ficedula_albicollis
ENSTGUG00000004792	USB1	99	60.967	ENSFDAG00000010052	USB1	79	67.453	Fukomys_damarensis
ENSTGUG00000004792	USB1	66	57.143	ENSFHEG00000012334	usb1	70	56.571	Fundulus_heteroclitus
ENSTGUG00000004792	USB1	87	52.915	ENSGMOG00000004228	usb1	95	54.717	Gadus_morhua
ENSTGUG00000004792	USB1	80	85.784	ENSGALG00000035604	USB1	83	83.412	Gallus_gallus
ENSTGUG00000004792	USB1	98	49.097	ENSGAFG00000021890	usb1	76	56.398	Gambusia_affinis
ENSTGUG00000004792	USB1	83	56.398	ENSGACG00000003257	usb1	76	56.398	Gasterosteus_aculeatus
ENSTGUG00000004792	USB1	99	65.926	ENSGAGG00000022572	USB1	77	77.512	Gopherus_agassizii
ENSTGUG00000004792	USB1	87	67.568	ENSGGOG00000017147	USB1	80	68.868	Gorilla_gorilla
ENSTGUG00000004792	USB1	87	52.252	ENSHBUG00000009823	usb1	75	53.081	Haplochromis_burtoni
ENSTGUG00000004792	USB1	99	63.296	ENSHGLG00000016078	USB1	78	67.925	Heterocephalus_glaber_female
ENSTGUG00000004792	USB1	99	63.296	ENSHGLG00100005562	USB1	78	67.925	Heterocephalus_glaber_male
ENSTGUG00000004792	USB1	83	56.398	ENSHCOG00000015633	usb1	81	56.398	Hippocampus_comes
ENSTGUG00000004792	USB1	87	54.505	ENSIPUG00000008601	usb1	73	55.924	Ictalurus_punctatus
ENSTGUG00000004792	USB1	91	66.525	ENSSTOG00000007548	USB1	78	70.283	Ictidomys_tridecemlineatus
ENSTGUG00000004792	USB1	99	61.798	ENSJJAG00000021859	Usb1	80	68.056	Jaculus_jaculus
ENSTGUG00000004792	USB1	87	53.153	ENSKMAG00000007200	usb1	74	54.502	Kryptolebias_marmoratus
ENSTGUG00000004792	USB1	76	53.846	ENSLBEG00000008452	usb1	60	53.933	Labrus_bergylta
ENSTGUG00000004792	USB1	94	51.894	ENSLACG00000000105	USB1	74	60.465	Latimeria_chalumnae
ENSTGUG00000004792	USB1	94	54.724	ENSLOCG00000000465	usb1	74	61.244	Lepisosteus_oculatus
ENSTGUG00000004792	USB1	99	51.636	ENSLAFG00000002267	USB1	78	57.477	Loxodonta_africana
ENSTGUG00000004792	USB1	99	63.774	ENSMFAG00000003926	USB1	80	70.283	Macaca_fascicularis
ENSTGUG00000004792	USB1	99	63.774	ENSMMUG00000022669	USB1	80	70.283	Macaca_mulatta
ENSTGUG00000004792	USB1	99	63.396	ENSMNEG00000042487	USB1	80	69.811	Macaca_nemestrina
ENSTGUG00000004792	USB1	99	63.774	ENSMLEG00000028756	USB1	80	70.283	Mandrillus_leucophaeus
ENSTGUG00000004792	USB1	87	55.405	ENSMAMG00000015092	usb1	76	56.398	Mastacembelus_armatus
ENSTGUG00000004792	USB1	87	51.802	ENSMZEG00005010008	usb1	75	53.081	Maylandia_zebra
ENSTGUG00000004792	USB1	99	61.798	ENSMAUG00000007832	Usb1	78	69.856	Mesocricetus_auratus
ENSTGUG00000004792	USB1	87	68.018	ENSMICG00000004900	USB1	80	69.340	Microcebus_murinus
ENSTGUG00000004792	USB1	99	60.985	ENSMOCG00000022647	Usb1	78	69.856	Microtus_ochrogaster
ENSTGUG00000004792	USB1	87	53.812	ENSMMOG00000000490	usb1	82	55.660	Mola_mola
ENSTGUG00000004792	USB1	95	63.071	ENSMODG00000014067	USB1	79	68.868	Monodelphis_domestica
ENSTGUG00000004792	USB1	93	51.793	ENSMALG00000005930	usb1	74	56.398	Monopterus_albus
ENSTGUG00000004792	USB1	99	60.000	MGP_CAROLIEiJ_G0031421	Usb1	98	62.162	Mus_caroli
ENSTGUG00000004792	USB1	99	60.377	ENSMUSG00000031792	Usb1	98	62.162	Mus_musculus
ENSTGUG00000004792	USB1	99	60.000	MGP_PahariEiJ_G0023019	Usb1	98	63.478	Mus_pahari
ENSTGUG00000004792	USB1	99	60.755	MGP_SPRETEiJ_G0032540	Usb1	79	66.038	Mus_spretus
ENSTGUG00000004792	USB1	84	64.953	ENSMPUG00000004684	USB1	74	64.953	Mustela_putorius_furo
ENSTGUG00000004792	USB1	82	69.378	ENSMLUG00000007400	USB1	90	69.378	Myotis_lucifugus
ENSTGUG00000004792	USB1	99	61.710	ENSNGAG00000009703	Usb1	79	69.340	Nannospalax_galili
ENSTGUG00000004792	USB1	87	48.649	ENSNBRG00000008747	usb1	98	52.607	Neolamprologus_brichardi
ENSTGUG00000004792	USB1	81	68.116	ENSNLEG00000003340	USB1	79	69.543	Nomascus_leucogenys
ENSTGUG00000004792	USB1	62	62.097	ENSOPRG00000011803	USB1	64	64.035	Ochotona_princeps
ENSTGUG00000004792	USB1	99	58.935	ENSODEG00000016214	USB1	79	66.667	Octodon_degus
ENSTGUG00000004792	USB1	88	52.174	ENSONIG00000011063	usb1	76	54.028	Oreochromis_niloticus
ENSTGUG00000004792	USB1	89	69.697	ENSOANG00000012118	USB1	89	73.239	Ornithorhynchus_anatinus
ENSTGUG00000004792	USB1	83	56.398	ENSORLG00000012479	usb1	77	56.398	Oryzias_latipes
ENSTGUG00000004792	USB1	86	55.204	ENSORLG00020018671	usb1	77	55.924	Oryzias_latipes_hni
ENSTGUG00000004792	USB1	86	55.204	ENSORLG00015009679	usb1	78	56.398	Oryzias_latipes_hsok
ENSTGUG00000004792	USB1	83	54.502	ENSOMEG00000012930	usb1	76	54.502	Oryzias_melastigma
ENSTGUG00000004792	USB1	87	62.162	ENSOGAG00000003273	USB1	79	63.208	Otolemur_garnettii
ENSTGUG00000004792	USB1	82	68.900	ENSOARG00000001107	USB1	80	68.900	Ovis_aries
ENSTGUG00000004792	USB1	87	68.018	ENSPPAG00000042137	USB1	80	69.340	Pan_paniscus
ENSTGUG00000004792	USB1	99	60.674	ENSPPRG00000024797	USB1	78	68.421	Panthera_pardus
ENSTGUG00000004792	USB1	82	67.943	ENSPTIG00000007506	USB1	78	67.943	Panthera_tigris_altaica
ENSTGUG00000004792	USB1	83	69.811	ENSPTRG00000008172	USB1	99	69.811	Pan_troglodytes
ENSTGUG00000004792	USB1	99	63.774	ENSPANG00000025138	USB1	80	70.283	Papio_anubis
ENSTGUG00000004792	USB1	88	57.778	ENSPKIG00000015109	usb1	71	60.287	Paramormyrops_kingsleyae
ENSTGUG00000004792	USB1	87	54.202	ENSPSIG00000004305	USB1	93	55.556	Pelodiscus_sinensis
ENSTGUG00000004792	USB1	86	52.941	ENSPMGG00000017725	usb1	81	53.555	Periophthalmus_magnuspinnatus
ENSTGUG00000004792	USB1	99	60.294	ENSPEMG00000016183	Usb1	77	69.378	Peromyscus_maniculatus_bairdii
ENSTGUG00000004792	USB1	89	51.695	ENSPMAG00000000462	usb1	89	54.930	Petromyzon_marinus
ENSTGUG00000004792	USB1	83	56.398	ENSPFOG00000011130	usb1	76	56.398	Poecilia_formosa
ENSTGUG00000004792	USB1	87	54.709	ENSPLAG00000009820	usb1	76	55.924	Poecilia_latipinna
ENSTGUG00000004792	USB1	98	49.281	ENSPMEG00000006402	usb1	76	56.398	Poecilia_mexicana
ENSTGUG00000004792	USB1	66	60.119	ENSPREG00000001047	usb1	70	58.857	Poecilia_reticulata
ENSTGUG00000004792	USB1	81	64.593	ENSPPYG00000007401	USB1	79	65.829	Pongo_abelii
ENSTGUG00000004792	USB1	87	66.216	ENSPCOG00000022612	USB1	80	67.453	Propithecus_coquereli
ENSTGUG00000004792	USB1	99	61.776	ENSPVAG00000004613	USB1	82	65.566	Pteropus_vampyrus
ENSTGUG00000004792	USB1	87	52.703	ENSPNYG00000022262	usb1	75	53.555	Pundamilia_nyererei
ENSTGUG00000004792	USB1	88	54.667	ENSPNAG00000011736	usb1	72	55.924	Pygocentrus_nattereri
ENSTGUG00000004792	USB1	99	61.509	ENSRNOG00000013216	Usb1	79	67.453	Rattus_norvegicus
ENSTGUG00000004792	USB1	94	59.671	ENSRBIG00000044466	USB1	99	70.283	Rhinopithecus_bieti
ENSTGUG00000004792	USB1	92	66.109	ENSRROG00000029211	USB1	80	70.283	Rhinopithecus_roxellana
ENSTGUG00000004792	USB1	87	68.919	ENSSBOG00000029362	USB1	80	70.283	Saimiri_boliviensis_boliviensis
ENSTGUG00000004792	USB1	83	64.151	ENSSHAG00000006993	USB1	84	64.151	Sarcophilus_harrisii
ENSTGUG00000004792	USB1	88	58.874	ENSSFOG00015023663	usb1	65	62.802	Scleropages_formosus
ENSTGUG00000004792	USB1	96	49.630	ENSSMAG00000015834	usb1	76	54.222	Scophthalmus_maximus
ENSTGUG00000004792	USB1	86	57.919	ENSSDUG00000002949	usb1	78	59.242	Seriola_dumerili
ENSTGUG00000004792	USB1	86	57.919	ENSSLDG00000014174	usb1	75	59.242	Seriola_lalandi_dorsalis
ENSTGUG00000004792	USB1	83	72.512	ENSSPUG00000006741	USB1	99	72.512	Sphenodon_punctatus
ENSTGUG00000004792	USB1	87	52.703	ENSSPAG00000007484	usb1	77	53.182	Stegastes_partitus
ENSTGUG00000004792	USB1	99	62.030	ENSSSCG00000002807	USB1	79	69.340	Sus_scrofa
ENSTGUG00000004792	USB1	98	50.373	ENSTRUG00000021069	usb1	78	55.660	Takifugu_rubripes
ENSTGUG00000004792	USB1	99	44.487	ENSTNIG00000000626	usb1	79	49.057	Tetraodon_nigroviridis
ENSTGUG00000004792	USB1	89	45.690	ENSTBEG00000001507	USB1	91	46.698	Tupaia_belangeri
ENSTGUG00000004792	USB1	99	59.108	ENSUAMG00000016823	USB1	78	66.351	Ursus_americanus
ENSTGUG00000004792	USB1	83	66.351	ENSUMAG00000021369	USB1	99	66.351	Ursus_maritimus
ENSTGUG00000004792	USB1	99	61.567	ENSVVUG00000023700	USB1	80	68.750	Vulpes_vulpes
ENSTGUG00000004792	USB1	98	55.200	ENSXETG00000013795	usb1	84	58.962	Xenopus_tropicalis
ENSTGUG00000004792	USB1	87	55.157	ENSXMAG00000024687	usb1	61	56.938	Xiphophorus_maculatus