EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000004876 (Gene tree)
Gene ID: 100224183
Gene Symbol: KATNB1
Alias: -
Full Name: katanin regulatory subunit B1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 17272 bases
Position: chr11:4244211-4261482
Accession: 6217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005043	eIF2A	PF08662.11	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005093	KATNB1-201	2281	-	ENSTGUP00000005043	664 (aa)	-	H0Z3A0

Gene Model

Click here to download ENSTGUG00000004876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000004876	KATNB1	58	31.126	ENSTGUG00000013357	WDR3	63	31.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004876	KATNB1	100	85.714	ENSCPBG00000026959	KATNB1	100	85.564	Chrysemys_picta_bellii
ENSTGUG00000004876	KATNB1	80	34.625	FBgn0040207	kat80	64	34.625	Drosophila_melanogaster
ENSTGUG00000004876	KATNB1	100	95.639	ENSFALG00000006902	KATNB1	100	95.639	Ficedula_albicollis
ENSTGUG00000004876	KATNB1	100	84.812	ENSGALG00000034373	KATNB1	100	84.812	Gallus_gallus
ENSTGUG00000004876	KATNB1	100	85.414	ENSGAGG00000020527	KATNB1	100	85.263	Gopherus_agassizii
ENSTGUG00000004876	KATNB1	100	85.414	ENSPSIG00000014651	KATNB1	100	85.414	Pelodiscus_sinensis
ENSTGUG00000004876	KATNB1	99	82.530	ENSSPUG00000007498	KATNB1	99	82.530	Sphenodon_punctatus