EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000004920 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 18901 bases
Position: chr7:8871301-8890201
Accession: 100232287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005113	ResIII	PF04851.15	8.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005163	-	2319	XM_012574848	ENSTGUP00000005113	772 (aa)	XP_012430302	H0Z3G9

Gene Model

Click here to download ENSTGUG00000004920's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03022	Basal transcription factors	KEGG
tgu03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000004920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000004920	-	100	93.540	ENSG00000163161	ERCC3	99	97.516	Homo_sapiens
ENSTGUG00000004920	-	99	88.402	ENSAPOG00000014383	ercc3	99	88.273	Acanthochromis_polyacanthus
ENSTGUG00000004920	-	100	93.023	ENSAMEG00000016840	ERCC3	99	92.377	Ailuropoda_melanoleuca
ENSTGUG00000004920	-	99	87.387	ENSACIG00000000126	ercc3	100	87.387	Amphilophus_citrinellus
ENSTGUG00000004920	-	99	87.887	ENSAOCG00000009396	ercc3	99	87.887	Amphiprion_ocellaris
ENSTGUG00000004920	-	99	87.887	ENSAPEG00000023077	ercc3	99	87.887	Amphiprion_percula
ENSTGUG00000004920	-	99	87.645	ENSATEG00000014860	ercc3	99	88.273	Anabas_testudineus
ENSTGUG00000004920	-	92	97.183	ENSAPLG00000012068	ERCC3	98	97.183	Anas_platyrhynchos
ENSTGUG00000004920	-	93	95.410	ENSACAG00000009919	ERCC3	100	95.410	Anolis_carolinensis
ENSTGUG00000004920	-	100	93.411	ENSANAG00000031091	ERCC3	99	92.765	Aotus_nancymaae
ENSTGUG00000004920	-	99	87.500	ENSACLG00000022508	ercc3	99	87.371	Astatotilapia_calliptera
ENSTGUG00000004920	-	100	87.226	ENSAMXG00000036947	ercc3	99	87.226	Astyanax_mexicanus
ENSTGUG00000004920	-	100	93.411	ENSBTAG00000020777	ERCC3	99	92.765	Bos_taurus
ENSTGUG00000004920	-	98	64.341	WBGene00013441	xpb-1	97	64.212	Caenorhabditis_elegans
ENSTGUG00000004920	-	100	93.411	ENSCJAG00000010416	ERCC3	99	92.765	Callithrix_jacchus
ENSTGUG00000004920	-	99	93.342	ENSCAFG00000004497	ERCC3	99	92.765	Canis_familiaris
ENSTGUG00000004920	-	99	93.342	ENSCAFG00020003495	ERCC3	99	92.765	Canis_lupus_dingo
ENSTGUG00000004920	-	100	93.798	ENSCHIG00000014551	ERCC3	99	93.152	Capra_hircus
ENSTGUG00000004920	-	100	92.894	ENSTSYG00000004137	ERCC3	99	92.119	Carlito_syrichta
ENSTGUG00000004920	-	90	78.398	ENSCAPG00000017027	ERCC3	100	77.539	Cavia_aperea
ENSTGUG00000004920	-	100	92.506	ENSCPOG00000002144	ERCC3	99	91.860	Cavia_porcellus
ENSTGUG00000004920	-	100	93.540	ENSCCAG00000024421	ERCC3	99	92.894	Cebus_capucinus
ENSTGUG00000004920	-	100	93.540	ENSCATG00000032313	ERCC3	99	92.894	Cercocebus_atys
ENSTGUG00000004920	-	100	92.765	ENSCLAG00000002965	ERCC3	95	92.119	Chinchilla_lanigera
ENSTGUG00000004920	-	100	93.411	ENSCSAG00000016827	ERCC3	99	92.765	Chlorocebus_sabaeus
ENSTGUG00000004920	-	83	97.661	ENSCHOG00000007414	ERCC3	81	97.661	Choloepus_hoffmanni
ENSTGUG00000004920	-	93	97.071	ENSCPBG00000013638	ERCC3	100	97.071	Chrysemys_picta_bellii
ENSTGUG00000004920	-	97	71.875	ENSCING00000002867	ercc3	96	71.745	Ciona_intestinalis
ENSTGUG00000004920	-	100	93.411	ENSCANG00000007094	ERCC3	99	92.765	Colobus_angolensis_palliatus
ENSTGUG00000004920	-	100	93.152	ENSCGRG00001009426	Ercc3	99	92.506	Cricetulus_griseus_chok1gshd
ENSTGUG00000004920	-	97	92.410	ENSCGRG00000015547	Ercc3	99	92.410	Cricetulus_griseus_crigri
ENSTGUG00000004920	-	100	86.393	ENSCSEG00000016479	ercc3	99	85.494	Cynoglossus_semilaevis
ENSTGUG00000004920	-	97	89.523	ENSCVAG00000015177	ercc3	99	87.629	Cyprinodon_variegatus
ENSTGUG00000004920	-	97	90.199	ENSDARG00000002402	ercc3	99	89.276	Danio_rerio
ENSTGUG00000004920	-	57	95.918	ENSDNOG00000035027	ERCC3	95	95.918	Dasypus_novemcinctus
ENSTGUG00000004920	-	97	94.821	ENSDORG00000004671	Ercc3	99	93.152	Dipodomys_ordii
ENSTGUG00000004920	-	99	68.481	FBgn0001179	hay	94	69.737	Drosophila_melanogaster
ENSTGUG00000004920	-	90	93.770	ENSETEG00000019887	ERCC3	89	93.770	Echinops_telfairi
ENSTGUG00000004920	-	99	80.256	ENSEBUG00000009773	ercc3	99	80.256	Eptatretus_burgeri
ENSTGUG00000004920	-	100	91.184	ENSEASG00005022466	ERCC3	99	90.932	Equus_asinus_asinus
ENSTGUG00000004920	-	100	93.798	ENSECAG00000006589	ERCC3	99	93.282	Equus_caballus
ENSTGUG00000004920	-	94	91.678	ENSEEUG00000001057	ERCC3	100	91.678	Erinaceus_europaeus
ENSTGUG00000004920	-	100	86.358	ENSELUG00000000089	ercc3	99	86.229	Esox_lucius
ENSTGUG00000004920	-	100	92.765	ENSFCAG00000006989	ERCC3	99	92.248	Felis_catus
ENSTGUG00000004920	-	100	97.677	ENSFALG00000003936	ERCC3	99	97.677	Ficedula_albicollis
ENSTGUG00000004920	-	100	92.497	ENSFDAG00000011924	ERCC3	99	91.850	Fukomys_damarensis
ENSTGUG00000004920	-	99	87.500	ENSFHEG00000005185	ercc3	99	86.856	Fundulus_heteroclitus
ENSTGUG00000004920	-	99	85.142	ENSGMOG00000018032	ercc3	98	85.013	Gadus_morhua
ENSTGUG00000004920	-	99	95.431	ENSGALG00000011515	ERCC3	99	95.478	Gallus_gallus
ENSTGUG00000004920	-	99	87.758	ENSGAFG00000011936	ercc3	99	87.887	Gambusia_affinis
ENSTGUG00000004920	-	97	88.165	ENSGACG00000015218	ercc3	99	88.033	Gasterosteus_aculeatus
ENSTGUG00000004920	-	93	96.932	ENSGAGG00000018579	ERCC3	100	96.932	Gopherus_agassizii
ENSTGUG00000004920	-	100	93.540	ENSGGOG00000015255	ERCC3	99	92.894	Gorilla_gorilla
ENSTGUG00000004920	-	99	87.500	ENSHBUG00000003818	ercc3	99	87.371	Haplochromis_burtoni
ENSTGUG00000004920	-	100	92.894	ENSHGLG00000011014	ERCC3	99	92.119	Heterocephalus_glaber_female
ENSTGUG00000004920	-	100	92.894	ENSHGLG00100013806	ERCC3	99	92.119	Heterocephalus_glaber_male
ENSTGUG00000004920	-	99	87.613	ENSHCOG00000016924	ercc3	99	87.613	Hippocampus_comes
ENSTGUG00000004920	-	100	87.500	ENSIPUG00000021000	ercc3	99	87.371	Ictalurus_punctatus
ENSTGUG00000004920	-	100	93.669	ENSSTOG00000011001	ERCC3	99	92.894	Ictidomys_tridecemlineatus
ENSTGUG00000004920	-	91	93.059	ENSJJAG00000001117	Ercc3	100	92.210	Jaculus_jaculus
ENSTGUG00000004920	-	99	88.531	ENSKMAG00000021764	ercc3	99	88.015	Kryptolebias_marmoratus
ENSTGUG00000004920	-	99	87.209	ENSLBEG00000000468	ercc3	99	87.080	Labrus_bergylta
ENSTGUG00000004920	-	99	86.521	ENSLACG00000014815	ERCC3	99	86.514	Latimeria_chalumnae
ENSTGUG00000004920	-	90	85.106	ENSLOCG00000010907	ercc3	87	85.106	Lepisosteus_oculatus
ENSTGUG00000004920	-	100	93.928	ENSLAFG00000014866	ERCC3	99	93.282	Loxodonta_africana
ENSTGUG00000004920	-	100	93.540	ENSMFAG00000003370	ERCC3	99	92.894	Macaca_fascicularis
ENSTGUG00000004920	-	100	89.541	ENSMNEG00000004215	ERCC3	94	94.062	Macaca_nemestrina
ENSTGUG00000004920	-	100	93.540	ENSMLEG00000042061	ERCC3	99	92.894	Mandrillus_leucophaeus
ENSTGUG00000004920	-	100	88.501	ENSMAMG00000004505	ercc3	99	88.243	Mastacembelus_armatus
ENSTGUG00000004920	-	99	87.500	ENSMZEG00005004854	ercc3	99	87.371	Maylandia_zebra
ENSTGUG00000004920	-	91	96.738	ENSMGAG00000011706	ERCC3	100	96.738	Meleagris_gallopavo
ENSTGUG00000004920	-	100	92.516	ENSMAUG00000004515	Ercc3	99	91.871	Mesocricetus_auratus
ENSTGUG00000004920	-	100	93.282	ENSMICG00000009578	ERCC3	99	92.377	Microcebus_murinus
ENSTGUG00000004920	-	100	92.765	ENSMOCG00000021767	Ercc3	99	92.119	Microtus_ochrogaster
ENSTGUG00000004920	-	99	86.934	ENSMMOG00000018174	ercc3	99	86.417	Mola_mola
ENSTGUG00000004920	-	99	93.734	ENSMODG00000018695	ERCC3	99	93.798	Monodelphis_domestica
ENSTGUG00000004920	-	99	87.629	ENSMALG00000014944	ercc3	99	87.629	Monopterus_albus
ENSTGUG00000004920	-	100	93.152	MGP_CAROLIEiJ_G0022075	Ercc3	99	92.377	Mus_caroli
ENSTGUG00000004920	-	97	93.767	ENSMUSG00000024382	Ercc3	99	92.129	Mus_musculus
ENSTGUG00000004920	-	100	93.023	MGP_PahariEiJ_G0018809	Ercc3	99	92.248	Mus_pahari
ENSTGUG00000004920	-	97	93.767	MGP_SPRETEiJ_G0022987	Ercc3	99	92.129	Mus_spretus
ENSTGUG00000004920	-	100	93.152	ENSMPUG00000012021	ERCC3	99	92.506	Mustela_putorius_furo
ENSTGUG00000004920	-	94	89.103	ENSMLUG00000007429	ERCC3	99	88.583	Myotis_lucifugus
ENSTGUG00000004920	-	99	89.793	ENSNGAG00000019598	Ercc3	99	93.699	Nannospalax_galili
ENSTGUG00000004920	-	99	87.500	ENSNBRG00000019074	ercc3	99	87.371	Neolamprologus_brichardi
ENSTGUG00000004920	-	93	91.771	ENSNLEG00000015665	ERCC3	97	91.074	Nomascus_leucogenys
ENSTGUG00000004920	-	100	90.956	ENSOPRG00000004553	ERCC3	99	90.310	Ochotona_princeps
ENSTGUG00000004920	-	100	93.023	ENSODEG00000005795	ERCC3	99	92.377	Octodon_degus
ENSTGUG00000004920	-	99	87.500	ENSONIG00000003255	ercc3	99	87.371	Oreochromis_niloticus
ENSTGUG00000004920	-	100	93.411	ENSOCUG00000002248	ERCC3	99	92.765	Oryctolagus_cuniculus
ENSTGUG00000004920	-	99	87.887	ENSORLG00000004393	ercc3	99	87.758	Oryzias_latipes
ENSTGUG00000004920	-	99	87.758	ENSORLG00020017718	ercc3	99	87.629	Oryzias_latipes_hni
ENSTGUG00000004920	-	99	87.629	ENSORLG00015015695	ercc3	99	87.500	Oryzias_latipes_hsok
ENSTGUG00000004920	-	99	88.015	ENSOMEG00000015374	ercc3	99	87.887	Oryzias_melastigma
ENSTGUG00000004920	-	100	93.170	ENSOGAG00000009103	ERCC3	99	92.397	Otolemur_garnettii
ENSTGUG00000004920	-	100	93.798	ENSOARG00000016147	ERCC3	99	93.152	Ovis_aries
ENSTGUG00000004920	-	100	93.540	ENSPPAG00000036166	ERCC3	99	92.894	Pan_paniscus
ENSTGUG00000004920	-	100	92.894	ENSPPRG00000001305	ERCC3	99	92.377	Panthera_pardus
ENSTGUG00000004920	-	93	93.880	ENSPTIG00000016969	ERCC3	100	93.324	Panthera_tigris_altaica
ENSTGUG00000004920	-	100	93.540	ENSPTRG00000046940	ERCC3	99	92.894	Pan_troglodytes
ENSTGUG00000004920	-	100	93.540	ENSPANG00000007699	ERCC3	99	92.894	Papio_anubis
ENSTGUG00000004920	-	100	88.402	ENSPKIG00000001319	ercc3	99	89.272	Paramormyrops_kingsleyae
ENSTGUG00000004920	-	93	96.513	ENSPSIG00000014682	ERCC3	100	96.513	Pelodiscus_sinensis
ENSTGUG00000004920	-	97	89.523	ENSPMGG00000017885	ercc3	99	88.601	Periophthalmus_magnuspinnatus
ENSTGUG00000004920	-	100	93.152	ENSPEMG00000013733	Ercc3	99	92.377	Peromyscus_maniculatus_bairdii
ENSTGUG00000004920	-	91	79.637	ENSPMAG00000005081	ercc3	99	79.498	Petromyzon_marinus
ENSTGUG00000004920	-	100	94.186	ENSPCIG00000011821	ERCC3	99	94.186	Phascolarctos_cinereus
ENSTGUG00000004920	-	97	89.153	ENSPFOG00000015604	ercc3	99	88.015	Poecilia_formosa
ENSTGUG00000004920	-	97	86.412	ENSPLAG00000022245	ercc3	100	89.058	Poecilia_latipinna
ENSTGUG00000004920	-	97	89.153	ENSPMEG00000016987	ercc3	99	88.015	Poecilia_mexicana
ENSTGUG00000004920	-	99	88.015	ENSPREG00000020921	ercc3	99	88.144	Poecilia_reticulata
ENSTGUG00000004920	-	100	92.774	ENSPPYG00000012769	ERCC3	99	92.129	Pongo_abelii
ENSTGUG00000004920	-	100	93.669	ENSPCOG00000024903	ERCC3	99	92.765	Propithecus_coquereli
ENSTGUG00000004920	-	90	91.829	ENSPVAG00000013774	ERCC3	89	89.883	Pteropus_vampyrus
ENSTGUG00000004920	-	99	87.500	ENSPNYG00000001208	ercc3	99	87.371	Pundamilia_nyererei
ENSTGUG00000004920	-	100	88.789	ENSPNAG00000005748	ercc3	99	88.402	Pygocentrus_nattereri
ENSTGUG00000004920	-	100	93.023	ENSRNOG00000013180	Ercc3	99	92.377	Rattus_norvegicus
ENSTGUG00000004920	-	100	93.282	ENSRBIG00000027692	ERCC3	99	92.636	Rhinopithecus_bieti
ENSTGUG00000004920	-	100	93.282	ENSRROG00000040673	ERCC3	99	92.765	Rhinopithecus_roxellana
ENSTGUG00000004920	-	92	57.143	YIL143C	SSL2	85	56.908	Saccharomyces_cerevisiae
ENSTGUG00000004920	-	100	93.282	ENSSBOG00000023079	ERCC3	99	92.636	Saimiri_boliviensis_boliviensis
ENSTGUG00000004920	-	99	93.734	ENSSHAG00000007423	ERCC3	99	93.798	Sarcophilus_harrisii
ENSTGUG00000004920	-	99	87.974	ENSSFOG00015012753	ercc3	99	87.242	Scleropages_formosus
ENSTGUG00000004920	-	100	87.275	ENSSMAG00000011915	ercc3	99	86.761	Scophthalmus_maximus
ENSTGUG00000004920	-	100	87.387	ENSSDUG00000021181	ercc3	99	87.387	Seriola_dumerili
ENSTGUG00000004920	-	100	87.645	ENSSLDG00000008744	ercc3	97	87.645	Seriola_lalandi_dorsalis
ENSTGUG00000004920	-	56	84.527	ENSSARG00000000751	-	85	84.527	Sorex_araneus
ENSTGUG00000004920	-	91	94.468	ENSSPUG00000015183	ERCC3	91	93.759	Sphenodon_punctatus
ENSTGUG00000004920	-	99	88.144	ENSSPAG00000004748	ercc3	99	87.500	Stegastes_partitus
ENSTGUG00000004920	-	100	93.411	ENSSSCG00000015721	ERCC3	99	93.610	Sus_scrofa
ENSTGUG00000004920	-	97	88.212	ENSTRUG00000017185	ercc3	97	87.947	Takifugu_rubripes
ENSTGUG00000004920	-	98	85.079	ENSTNIG00000005457	ercc3	99	86.490	Tetraodon_nigroviridis
ENSTGUG00000004920	-	81	93.450	ENSTBEG00000009381	ERCC3	81	92.332	Tupaia_belangeri
ENSTGUG00000004920	-	69	96.408	ENSUAMG00000009589	-	100	96.408	Ursus_americanus
ENSTGUG00000004920	-	100	93.282	ENSUMAG00000008361	ERCC3	99	92.636	Ursus_maritimus
ENSTGUG00000004920	-	93	94.159	ENSVVUG00000010431	ERCC3	100	93.463	Vulpes_vulpes
ENSTGUG00000004920	-	100	90.206	ENSXETG00000033646	ercc3	99	90.206	Xenopus_tropicalis
ENSTGUG00000004920	-	99	88.114	ENSXCOG00000001791	ercc3	99	88.243	Xiphophorus_couchianus
ENSTGUG00000004920	-	99	87.887	ENSXMAG00000003641	ercc3	99	88.015	Xiphophorus_maculatus