EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005010 (Gene tree)
Gene ID: 100231989
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 49979 bases
Position: chr5:3559074-3609052
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005201	Suf	PF05843.14	1.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005253	CSTF3-201	2552	-	ENSTGUP00000005201	708 (aa)	-	H0Z3Q7

Gene Model

Click here to download ENSTGUG00000005010's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005010	CSTF3	100	97.740	ENSG00000176102	CSTF3	99	97.740	Homo_sapiens
ENSTGUG00000005010	CSTF3	100	91.525	ENSAPOG00000014054	cstf3	99	91.525	Acanthochromis_polyacanthus
ENSTGUG00000005010	CSTF3	100	97.881	ENSAMEG00000007187	CSTF3	98	97.881	Ailuropoda_melanoleuca
ENSTGUG00000005010	CSTF3	88	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSTGUG00000005010	CSTF3	100	91.525	ENSAOCG00000010930	cstf3	99	91.525	Amphiprion_ocellaris
ENSTGUG00000005010	CSTF3	100	91.525	ENSAPEG00000007903	cstf3	99	91.525	Amphiprion_percula
ENSTGUG00000005010	CSTF3	100	91.949	ENSATEG00000000190	cstf3	99	91.949	Anabas_testudineus
ENSTGUG00000005010	CSTF3	100	98.729	ENSAPLG00000007217	CSTF3	100	98.729	Anas_platyrhynchos
ENSTGUG00000005010	CSTF3	100	96.469	ENSACAG00000002823	CSTF3	99	96.469	Anolis_carolinensis
ENSTGUG00000005010	CSTF3	100	97.740	ENSANAG00000020699	CSTF3	100	97.600	Aotus_nancymaae
ENSTGUG00000005010	CSTF3	99	91.915	ENSACLG00000007820	cstf3	99	91.808	Astatotilapia_calliptera
ENSTGUG00000005010	CSTF3	100	90.550	ENSAMXG00000014198	cstf3	99	90.832	Astyanax_mexicanus
ENSTGUG00000005010	CSTF3	100	97.740	ENSBTAG00000008617	CSTF3	100	97.774	Bos_taurus
ENSTGUG00000005010	CSTF3	99	49.041	WBGene00006307	suf-1	99	49.041	Caenorhabditis_elegans
ENSTGUG00000005010	CSTF3	100	97.740	ENSCJAG00000005533	CSTF3	100	97.600	Callithrix_jacchus
ENSTGUG00000005010	CSTF3	100	97.740	ENSCAFG00000007264	CSTF3	99	97.740	Canis_familiaris
ENSTGUG00000005010	CSTF3	100	97.740	ENSCAFG00020002715	CSTF3	98	97.740	Canis_lupus_dingo
ENSTGUG00000005010	CSTF3	99	96.302	ENSCHIG00000016418	CSTF3	100	97.600	Capra_hircus
ENSTGUG00000005010	CSTF3	100	97.458	ENSTSYG00000000451	CSTF3	99	99.332	Carlito_syrichta
ENSTGUG00000005010	CSTF3	84	91.469	ENSCAPG00000010958	CSTF3	98	91.469	Cavia_aperea
ENSTGUG00000005010	CSTF3	100	97.740	ENSCPOG00000005545	CSTF3	99	97.740	Cavia_porcellus
ENSTGUG00000005010	CSTF3	100	97.740	ENSCCAG00000024790	CSTF3	100	97.600	Cebus_capucinus
ENSTGUG00000005010	CSTF3	100	97.740	ENSCATG00000007080	CSTF3	100	97.600	Cercocebus_atys
ENSTGUG00000005010	CSTF3	100	97.740	ENSCLAG00000016179	CSTF3	99	97.740	Chinchilla_lanigera
ENSTGUG00000005010	CSTF3	79	99.624	ENSCHOG00000002497	CSTF3	79	99.624	Choloepus_hoffmanni
ENSTGUG00000005010	CSTF3	100	98.305	ENSCPBG00000006753	CSTF3	99	98.305	Chrysemys_picta_bellii
ENSTGUG00000005010	CSTF3	100	62.151	ENSCING00000006401	-	98	62.151	Ciona_intestinalis
ENSTGUG00000005010	CSTF3	99	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSTGUG00000005010	CSTF3	100	97.740	ENSCANG00000035468	CSTF3	100	97.600	Colobus_angolensis_palliatus
ENSTGUG00000005010	CSTF3	100	97.599	ENSCGRG00001014773	Cstf3	99	97.599	Cricetulus_griseus_chok1gshd
ENSTGUG00000005010	CSTF3	100	97.599	ENSCGRG00000004142	Cstf3	99	97.599	Cricetulus_griseus_crigri
ENSTGUG00000005010	CSTF3	100	91.525	ENSCSEG00000014283	cstf3	99	91.525	Cynoglossus_semilaevis
ENSTGUG00000005010	CSTF3	100	90.395	ENSCVAG00000019739	cstf3	99	90.395	Cyprinodon_variegatus
ENSTGUG00000005010	CSTF3	100	91.808	ENSDARG00000018904	cstf3	99	91.808	Danio_rerio
ENSTGUG00000005010	CSTF3	100	97.316	ENSDNOG00000007366	CSTF3	99	97.316	Dasypus_novemcinctus
ENSTGUG00000005010	CSTF3	100	89.845	ENSDORG00000005898	Cstf3	99	89.845	Dipodomys_ordii
ENSTGUG00000005010	CSTF3	99	57.895	FBgn0003559	su(f)	98	57.895	Drosophila_melanogaster
ENSTGUG00000005010	CSTF3	91	92.212	ENSETEG00000017097	CSTF3	90	92.212	Echinops_telfairi
ENSTGUG00000005010	CSTF3	85	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSTGUG00000005010	CSTF3	99	98.000	ENSEASG00005019884	CSTF3	100	98.000	Equus_asinus_asinus
ENSTGUG00000005010	CSTF3	99	98.000	ENSECAG00000023338	CSTF3	100	98.000	Equus_caballus
ENSTGUG00000005010	CSTF3	100	92.232	ENSEEUG00000015167	CSTF3	99	92.232	Erinaceus_europaeus
ENSTGUG00000005010	CSTF3	100	90.113	ENSELUG00000023393	cstf3	99	90.113	Esox_lucius
ENSTGUG00000005010	CSTF3	100	97.740	ENSFCAG00000030711	CSTF3	99	97.740	Felis_catus
ENSTGUG00000005010	CSTF3	94	99.850	ENSFALG00000010764	CSTF3	100	99.232	Ficedula_albicollis
ENSTGUG00000005010	CSTF3	100	97.740	ENSFDAG00000012082	CSTF3	99	97.740	Fukomys_damarensis
ENSTGUG00000005010	CSTF3	100	90.678	ENSFHEG00000020623	cstf3	99	90.678	Fundulus_heteroclitus
ENSTGUG00000005010	CSTF3	100	89.845	ENSGMOG00000012275	cstf3	99	89.845	Gadus_morhua
ENSTGUG00000005010	CSTF3	100	99.153	ENSGALG00000011685	CSTF3	99	99.153	Gallus_gallus
ENSTGUG00000005010	CSTF3	100	90.819	ENSGAFG00000002181	cstf3	99	90.819	Gambusia_affinis
ENSTGUG00000005010	CSTF3	100	90.678	ENSGACG00000015997	cstf3	99	90.678	Gasterosteus_aculeatus
ENSTGUG00000005010	CSTF3	100	98.305	ENSGAGG00000006200	CSTF3	99	98.305	Gopherus_agassizii
ENSTGUG00000005010	CSTF3	100	91.808	ENSGGOG00000026591	CSTF3	99	91.808	Gorilla_gorilla
ENSTGUG00000005010	CSTF3	99	91.915	ENSHBUG00000016656	cstf3	99	91.808	Haplochromis_burtoni
ENSTGUG00000005010	CSTF3	100	97.740	ENSHGLG00000017834	CSTF3	99	97.740	Heterocephalus_glaber_female
ENSTGUG00000005010	CSTF3	100	97.740	ENSHGLG00100018042	CSTF3	99	97.740	Heterocephalus_glaber_male
ENSTGUG00000005010	CSTF3	99	88.952	ENSHCOG00000015218	cstf3	99	88.842	Hippocampus_comes
ENSTGUG00000005010	CSTF3	99	90.510	ENSIPUG00000013170	CSTF3	99	90.510	Ictalurus_punctatus
ENSTGUG00000005010	CSTF3	100	97.740	ENSSTOG00000013306	CSTF3	99	97.740	Ictidomys_tridecemlineatus
ENSTGUG00000005010	CSTF3	100	85.876	ENSJJAG00000018430	Cstf3	98	85.876	Jaculus_jaculus
ENSTGUG00000005010	CSTF3	100	90.113	ENSKMAG00000010916	cstf3	99	90.113	Kryptolebias_marmoratus
ENSTGUG00000005010	CSTF3	100	90.395	ENSLBEG00000002306	cstf3	99	90.523	Labrus_bergylta
ENSTGUG00000005010	CSTF3	100	93.785	ENSLACG00000017296	CSTF3	99	93.785	Latimeria_chalumnae
ENSTGUG00000005010	CSTF3	100	93.220	ENSLOCG00000004415	cstf3	99	93.220	Lepisosteus_oculatus
ENSTGUG00000005010	CSTF3	100	97.740	ENSLAFG00000008712	CSTF3	99	97.740	Loxodonta_africana
ENSTGUG00000005010	CSTF3	100	97.740	ENSMFAG00000029516	CSTF3	100	97.600	Macaca_fascicularis
ENSTGUG00000005010	CSTF3	100	97.740	ENSMMUG00000002542	CSTF3	99	97.740	Macaca_mulatta
ENSTGUG00000005010	CSTF3	100	97.740	ENSMNEG00000021807	CSTF3	100	97.600	Macaca_nemestrina
ENSTGUG00000005010	CSTF3	100	97.740	ENSMLEG00000039594	CSTF3	100	97.600	Mandrillus_leucophaeus
ENSTGUG00000005010	CSTF3	100	91.384	ENSMAMG00000020423	cstf3	99	91.384	Mastacembelus_armatus
ENSTGUG00000005010	CSTF3	99	91.915	ENSMZEG00005012082	cstf3	99	91.808	Maylandia_zebra
ENSTGUG00000005010	CSTF3	100	99.153	ENSMGAG00000001383	CSTF3	99	99.153	Meleagris_gallopavo
ENSTGUG00000005010	CSTF3	100	97.458	ENSMAUG00000002487	Cstf3	99	97.458	Mesocricetus_auratus
ENSTGUG00000005010	CSTF3	100	97.740	ENSMICG00000004784	CSTF3	100	97.600	Microcebus_murinus
ENSTGUG00000005010	CSTF3	100	97.599	ENSMOCG00000017583	Cstf3	99	97.599	Microtus_ochrogaster
ENSTGUG00000005010	CSTF3	100	91.243	ENSMMOG00000016026	cstf3	94	91.243	Mola_mola
ENSTGUG00000005010	CSTF3	100	97.175	ENSMODG00000009745	-	99	97.175	Monodelphis_domestica
ENSTGUG00000005010	CSTF3	99	83.876	ENSMODG00000025205	-	99	83.876	Monodelphis_domestica
ENSTGUG00000005010	CSTF3	100	91.243	ENSMALG00000012050	cstf3	99	91.243	Monopterus_albus
ENSTGUG00000005010	CSTF3	100	97.599	MGP_CAROLIEiJ_G0024026	Cstf3	99	97.599	Mus_caroli
ENSTGUG00000005010	CSTF3	100	97.599	ENSMUSG00000027176	Cstf3	99	97.599	Mus_musculus
ENSTGUG00000005010	CSTF3	100	97.599	MGP_PahariEiJ_G0025464	Cstf3	99	97.599	Mus_pahari
ENSTGUG00000005010	CSTF3	100	97.599	MGP_SPRETEiJ_G0024939	Cstf3	99	97.599	Mus_spretus
ENSTGUG00000005010	CSTF3	100	97.881	ENSMPUG00000011457	CSTF3	99	97.881	Mustela_putorius_furo
ENSTGUG00000005010	CSTF3	100	97.740	ENSMLUG00000003073	-	99	97.740	Myotis_lucifugus
ENSTGUG00000005010	CSTF3	99	95.467	ENSMLUG00000026022	-	98	95.467	Myotis_lucifugus
ENSTGUG00000005010	CSTF3	100	97.881	ENSNGAG00000010677	Cstf3	99	97.881	Nannospalax_galili
ENSTGUG00000005010	CSTF3	88	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSTGUG00000005010	CSTF3	100	97.740	ENSNLEG00000017901	CSTF3	100	97.600	Nomascus_leucogenys
ENSTGUG00000005010	CSTF3	74	94.646	ENSMEUG00000005640	-	100	94.646	Notamacropus_eugenii
ENSTGUG00000005010	CSTF3	67	98.485	ENSOPRG00000000199	-	66	98.485	Ochotona_princeps
ENSTGUG00000005010	CSTF3	90	85.377	ENSODEG00000006311	-	97	85.377	Octodon_degus
ENSTGUG00000005010	CSTF3	100	97.740	ENSODEG00000016737	-	99	97.740	Octodon_degus
ENSTGUG00000005010	CSTF3	99	91.915	ENSONIG00000005563	cstf3	99	91.808	Oreochromis_niloticus
ENSTGUG00000005010	CSTF3	92	96.769	ENSOANG00000015140	CSTF3	100	96.769	Ornithorhynchus_anatinus
ENSTGUG00000005010	CSTF3	100	97.740	ENSOCUG00000015417	CSTF3	99	97.740	Oryctolagus_cuniculus
ENSTGUG00000005010	CSTF3	99	91.372	ENSORLG00000009762	cstf3	99	91.372	Oryzias_latipes
ENSTGUG00000005010	CSTF3	99	91.372	ENSORLG00020005540	cstf3	99	91.372	Oryzias_latipes_hni
ENSTGUG00000005010	CSTF3	99	91.231	ENSORLG00015003551	cstf3	99	91.231	Oryzias_latipes_hsok
ENSTGUG00000005010	CSTF3	99	90.806	ENSOMEG00000003848	cstf3	99	90.806	Oryzias_melastigma
ENSTGUG00000005010	CSTF3	100	97.468	ENSOGAG00000010229	CSTF3	99	97.468	Otolemur_garnettii
ENSTGUG00000005010	CSTF3	91	97.512	ENSOARG00000017271	CSTF3	99	97.512	Ovis_aries
ENSTGUG00000005010	CSTF3	100	94.209	ENSPPAG00000027358	CSTF3	99	94.209	Pan_paniscus
ENSTGUG00000005010	CSTF3	100	97.740	ENSPPRG00000016852	CSTF3	99	97.740	Panthera_pardus
ENSTGUG00000005010	CSTF3	100	97.740	ENSPTIG00000008716	CSTF3	99	97.740	Panthera_tigris_altaica
ENSTGUG00000005010	CSTF3	100	97.740	ENSPTRG00000003485	CSTF3	99	97.740	Pan_troglodytes
ENSTGUG00000005010	CSTF3	100	97.740	ENSPANG00000013722	CSTF3	99	97.740	Papio_anubis
ENSTGUG00000005010	CSTF3	100	92.514	ENSPKIG00000023648	cstf3	99	92.514	Paramormyrops_kingsleyae
ENSTGUG00000005010	CSTF3	100	98.023	ENSPSIG00000009173	CSTF3	99	98.023	Pelodiscus_sinensis
ENSTGUG00000005010	CSTF3	76	95.725	ENSPMGG00000000164	cstf3	98	95.725	Periophthalmus_magnuspinnatus
ENSTGUG00000005010	CSTF3	100	97.458	ENSPEMG00000011481	Cstf3	99	97.458	Peromyscus_maniculatus_bairdii
ENSTGUG00000005010	CSTF3	99	80.563	ENSPMAG00000007282	cstf3	98	80.704	Petromyzon_marinus
ENSTGUG00000005010	CSTF3	100	94.640	ENSPCIG00000026406	-	100	96.800	Phascolarctos_cinereus
ENSTGUG00000005010	CSTF3	100	80.818	ENSPCIG00000030419	-	89	81.241	Phascolarctos_cinereus
ENSTGUG00000005010	CSTF3	100	90.960	ENSPFOG00000017239	cstf3	99	90.960	Poecilia_formosa
ENSTGUG00000005010	CSTF3	100	91.102	ENSPLAG00000009456	cstf3	99	91.102	Poecilia_latipinna
ENSTGUG00000005010	CSTF3	100	90.960	ENSPMEG00000010320	cstf3	99	90.960	Poecilia_mexicana
ENSTGUG00000005010	CSTF3	100	90.960	ENSPREG00000013549	cstf3	99	90.960	Poecilia_reticulata
ENSTGUG00000005010	CSTF3	100	97.740	ENSPPYG00000003375	CSTF3	99	97.740	Pongo_abelii
ENSTGUG00000005010	CSTF3	70	99.303	ENSPCAG00000008025	-	70	99.303	Procavia_capensis
ENSTGUG00000005010	CSTF3	100	92.514	ENSPCOG00000014417	CSTF3	99	92.514	Propithecus_coquereli
ENSTGUG00000005010	CSTF3	100	92.232	ENSPVAG00000002350	CSTF3	99	92.232	Pteropus_vampyrus
ENSTGUG00000005010	CSTF3	99	91.915	ENSPNYG00000018259	cstf3	99	91.808	Pundamilia_nyererei
ENSTGUG00000005010	CSTF3	100	91.949	ENSPNAG00000020182	cstf3	99	91.949	Pygocentrus_nattereri
ENSTGUG00000005010	CSTF3	88	97.120	ENSRNOG00000012089	Cstf3	100	97.120	Rattus_norvegicus
ENSTGUG00000005010	CSTF3	100	96.328	ENSRBIG00000044258	CSTF3	100	97.600	Rhinopithecus_bieti
ENSTGUG00000005010	CSTF3	100	97.740	ENSRROG00000043450	CSTF3	100	97.600	Rhinopithecus_roxellana
ENSTGUG00000005010	CSTF3	100	97.740	ENSSBOG00000024764	CSTF3	100	97.600	Saimiri_boliviensis_boliviensis
ENSTGUG00000005010	CSTF3	100	85.452	ENSSHAG00000003135	-	98	85.452	Sarcophilus_harrisii
ENSTGUG00000005010	CSTF3	100	96.893	ENSSHAG00000018128	-	99	96.893	Sarcophilus_harrisii
ENSTGUG00000005010	CSTF3	100	93.220	ENSSFOG00015022133	cstf3	99	93.220	Scleropages_formosus
ENSTGUG00000005010	CSTF3	100	90.678	ENSSMAG00000002197	cstf3	99	90.678	Scophthalmus_maximus
ENSTGUG00000005010	CSTF3	100	91.667	ENSSDUG00000020426	cstf3	99	91.667	Seriola_dumerili
ENSTGUG00000005010	CSTF3	100	91.667	ENSSLDG00000025649	cstf3	99	91.667	Seriola_lalandi_dorsalis
ENSTGUG00000005010	CSTF3	100	97.599	ENSSARG00000000391	CSTF3	99	97.599	Sorex_araneus
ENSTGUG00000005010	CSTF3	98	97.540	ENSSPUG00000010546	CSTF3	100	97.540	Sphenodon_punctatus
ENSTGUG00000005010	CSTF3	100	91.384	ENSSPAG00000004958	cstf3	99	91.384	Stegastes_partitus
ENSTGUG00000005010	CSTF3	100	97.599	ENSSSCG00000040954	CSTF3	99	97.599	Sus_scrofa
ENSTGUG00000005010	CSTF3	100	89.972	ENSTRUG00000004959	cstf3	99	89.972	Takifugu_rubripes
ENSTGUG00000005010	CSTF3	100	90.395	ENSTNIG00000013811	cstf3	98	90.395	Tetraodon_nigroviridis
ENSTGUG00000005010	CSTF3	91	94.704	ENSTBEG00000001544	CSTF3	90	94.704	Tupaia_belangeri
ENSTGUG00000005010	CSTF3	100	94.915	ENSTTRG00000016366	CSTF3	99	94.915	Tursiops_truncatus
ENSTGUG00000005010	CSTF3	100	97.740	ENSUMAG00000018971	CSTF3	100	97.600	Ursus_maritimus
ENSTGUG00000005010	CSTF3	100	97.599	ENSVPAG00000007800	CSTF3	99	97.599	Vicugna_pacos
ENSTGUG00000005010	CSTF3	100	97.740	ENSVVUG00000014938	CSTF3	100	97.600	Vulpes_vulpes
ENSTGUG00000005010	CSTF3	89	79.688	ENSXETG00000021399	cstf3	100	80.906	Xenopus_tropicalis
ENSTGUG00000005010	CSTF3	67	43.659	ENSXETG00000017946	-	99	43.659	Xenopus_tropicalis
ENSTGUG00000005010	CSTF3	88	90.080	ENSXCOG00000011741	cstf3	100	90.080	Xiphophorus_couchianus
ENSTGUG00000005010	CSTF3	100	90.960	ENSXMAG00000009545	cstf3	99	90.960	Xiphophorus_maculatus