EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000005090 (Gene tree)
Gene ID: 100231854
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 21504 bases
Position: chr6:3907770-3929273
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005263	DND1_DSRM	PF14709.7	1.2e-24	1	1
ENSTGUP00000005263	RRM_1	PF00076.22	2e-39	1	3
ENSTGUP00000005263	RRM_1	PF00076.22	2e-39	2	3
ENSTGUP00000005263	RRM_1	PF00076.22	2e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005315	A1CF-201	1794	-	ENSTGUP00000005263	597 (aa)	-	H0Z3W9

Gene Model

Click here to download ENSTGUG00000005090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000005090	A1CF	52	53.165	ENSTGUG00000000880	HNRNPR	66	52.532
ENSTGUG00000005090	A1CF	87	49.614	ENSTGUG00000005307	RBM46	98	49.421
ENSTGUG00000005090	A1CF	74	59.121	ENSTGUG00000008705	RBM47	73	58.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005090	A1CF	100	86.957	ENSG00000148584	A1CF	100	95.025	Homo_sapiens
ENSTGUG00000005090	A1CF	100	74.380	ENSAPOG00000008259	a1cf	100	74.380	Acanthochromis_polyacanthus
ENSTGUG00000005090	A1CF	100	87.458	ENSAMEG00000000523	A1CF	100	87.458	Ailuropoda_melanoleuca
ENSTGUG00000005090	A1CF	100	75.896	ENSACIG00000008632	a1cf	100	77.524	Amphilophus_citrinellus
ENSTGUG00000005090	A1CF	100	75.041	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSTGUG00000005090	A1CF	100	76.020	ENSAPEG00000009537	a1cf	100	76.672	Amphiprion_percula
ENSTGUG00000005090	A1CF	100	76.098	ENSATEG00000013720	a1cf	100	77.724	Anabas_testudineus
ENSTGUG00000005090	A1CF	100	93.467	ENSAPLG00000002964	A1CF	100	93.467	Anas_platyrhynchos
ENSTGUG00000005090	A1CF	100	85.452	ENSACAG00000015269	A1CF	100	85.452	Anolis_carolinensis
ENSTGUG00000005090	A1CF	100	85.240	ENSANAG00000019974	A1CF	100	85.953	Aotus_nancymaae
ENSTGUG00000005090	A1CF	100	74.267	ENSACLG00000017428	a1cf	100	75.733	Astatotilapia_calliptera
ENSTGUG00000005090	A1CF	100	76.198	ENSAMXG00000018180	a1cf	100	76.364	Astyanax_mexicanus
ENSTGUG00000005090	A1CF	100	85.953	ENSBTAG00000021195	A1CF	100	88.300	Bos_taurus
ENSTGUG00000005090	A1CF	100	86.899	ENSCJAG00000005045	A1CF	100	87.625	Callithrix_jacchus
ENSTGUG00000005090	A1CF	100	87.960	ENSCAFG00000015581	A1CF	100	87.960	Canis_familiaris
ENSTGUG00000005090	A1CF	100	87.960	ENSCAFG00020026421	A1CF	98	90.203	Canis_lupus_dingo
ENSTGUG00000005090	A1CF	100	87.124	ENSCHIG00000020411	A1CF	100	87.458	Capra_hircus
ENSTGUG00000005090	A1CF	97	84.746	ENSTSYG00000001755	A1CF	100	86.372	Carlito_syrichta
ENSTGUG00000005090	A1CF	100	79.876	ENSCAPG00000017386	A1CF	100	79.567	Cavia_aperea
ENSTGUG00000005090	A1CF	100	87.124	ENSCPOG00000009807	A1CF	100	87.458	Cavia_porcellus
ENSTGUG00000005090	A1CF	100	87.043	ENSCCAG00000018168	A1CF	100	87.043	Cebus_capucinus
ENSTGUG00000005090	A1CF	100	85.953	ENSCATG00000043715	A1CF	100	85.953	Cercocebus_atys
ENSTGUG00000005090	A1CF	100	87.312	ENSCLAG00000010424	A1CF	100	87.479	Chinchilla_lanigera
ENSTGUG00000005090	A1CF	100	87.625	ENSCSAG00000007032	A1CF	100	87.625	Chlorocebus_sabaeus
ENSTGUG00000005090	A1CF	98	83.502	ENSCHOG00000009089	A1CF	99	83.502	Choloepus_hoffmanni
ENSTGUG00000005090	A1CF	100	90.301	ENSCPBG00000026464	A1CF	100	90.301	Chrysemys_picta_bellii
ENSTGUG00000005090	A1CF	100	87.458	ENSCANG00000038032	A1CF	100	87.458	Colobus_angolensis_palliatus
ENSTGUG00000005090	A1CF	100	86.455	ENSCGRG00001017413	A1cf	100	86.455	Cricetulus_griseus_chok1gshd
ENSTGUG00000005090	A1CF	100	86.120	ENSCGRG00000017332	A1cf	100	86.477	Cricetulus_griseus_crigri
ENSTGUG00000005090	A1CF	100	75.493	ENSCSEG00000002361	a1cf	100	77.152	Cynoglossus_semilaevis
ENSTGUG00000005090	A1CF	100	75.122	ENSCVAG00000010520	a1cf	100	76.911	Cyprinodon_variegatus
ENSTGUG00000005090	A1CF	100	78.773	ENSDARG00000002968	a1cf	100	80.100	Danio_rerio
ENSTGUG00000005090	A1CF	100	87.124	ENSDNOG00000002829	A1CF	100	87.124	Dasypus_novemcinctus
ENSTGUG00000005090	A1CF	81	90.580	ENSETEG00000012527	A1CF	81	90.580	Echinops_telfairi
ENSTGUG00000005090	A1CF	100	88.294	ENSEASG00005012924	A1CF	100	88.294	Equus_asinus_asinus
ENSTGUG00000005090	A1CF	100	87.960	ENSECAG00000010424	A1CF	100	87.960	Equus_caballus
ENSTGUG00000005090	A1CF	77	76.231	ENSEEUG00000000013	A1CF	100	76.231	Erinaceus_europaeus
ENSTGUG00000005090	A1CF	100	80.100	ENSELUG00000003159	a1cf	100	80.100	Esox_lucius
ENSTGUG00000005090	A1CF	100	85.619	ENSFCAG00000011179	A1CF	100	86.000	Felis_catus
ENSTGUG00000005090	A1CF	100	96.482	ENSFALG00000013183	A1CF	100	96.482	Ficedula_albicollis
ENSTGUG00000005090	A1CF	100	86.120	ENSFDAG00000019371	A1CF	100	86.288	Fukomys_damarensis
ENSTGUG00000005090	A1CF	100	69.628	ENSFHEG00000019652	a1cf	96	83.594	Fundulus_heteroclitus
ENSTGUG00000005090	A1CF	100	72.039	ENSGMOG00000018943	a1cf	100	71.875	Gadus_morhua
ENSTGUG00000005090	A1CF	95	93.110	ENSGALG00000003765	A1CF	97	93.110	Gallus_gallus
ENSTGUG00000005090	A1CF	100	70.279	ENSGAFG00000014868	a1cf	100	71.593	Gambusia_affinis
ENSTGUG00000005090	A1CF	100	74.590	ENSGACG00000010241	a1cf	100	75.410	Gasterosteus_aculeatus
ENSTGUG00000005090	A1CF	94	90.619	ENSGAGG00000016508	A1CF	97	90.619	Gopherus_agassizii
ENSTGUG00000005090	A1CF	100	87.124	ENSGGOG00000009670	A1CF	100	87.291	Gorilla_gorilla
ENSTGUG00000005090	A1CF	100	75.407	ENSHBUG00000021959	a1cf	100	77.524	Haplochromis_burtoni
ENSTGUG00000005090	A1CF	100	87.458	ENSHGLG00000008955	A1CF	100	87.793	Heterocephalus_glaber_female
ENSTGUG00000005090	A1CF	100	86.789	ENSHGLG00100000518	A1CF	100	87.124	Heterocephalus_glaber_male
ENSTGUG00000005090	A1CF	95	71.575	ENSHCOG00000017669	a1cf	100	72.285	Hippocampus_comes
ENSTGUG00000005090	A1CF	89	83.985	ENSIPUG00000010367	a1cf	99	82.079	Ictalurus_punctatus
ENSTGUG00000005090	A1CF	100	78.374	ENSKMAG00000006568	a1cf	100	79.187	Kryptolebias_marmoratus
ENSTGUG00000005090	A1CF	99	75.772	ENSLBEG00000020994	a1cf	99	77.398	Labrus_bergylta
ENSTGUG00000005090	A1CF	100	82.529	ENSLACG00000008061	A1CF	100	82.529	Latimeria_chalumnae
ENSTGUG00000005090	A1CF	100	83.389	ENSLOCG00000006302	a1cf	100	83.389	Lepisosteus_oculatus
ENSTGUG00000005090	A1CF	100	87.793	ENSLAFG00000015462	A1CF	100	87.793	Loxodonta_africana
ENSTGUG00000005090	A1CF	100	86.288	ENSMFAG00000035948	A1CF	100	86.288	Macaca_fascicularis
ENSTGUG00000005090	A1CF	100	86.288	ENSMMUG00000007077	A1CF	100	86.288	Macaca_mulatta
ENSTGUG00000005090	A1CF	100	85.953	ENSMNEG00000031454	A1CF	100	85.953	Macaca_nemestrina
ENSTGUG00000005090	A1CF	100	87.291	ENSMLEG00000037223	A1CF	100	87.291	Mandrillus_leucophaeus
ENSTGUG00000005090	A1CF	100	74.673	ENSMAMG00000010402	a1cf	100	76.471	Mastacembelus_armatus
ENSTGUG00000005090	A1CF	100	77.483	ENSMZEG00005013245	a1cf	100	78.477	Maylandia_zebra
ENSTGUG00000005090	A1CF	100	93.311	ENSMGAG00000001507	A1CF	100	93.311	Meleagris_gallopavo
ENSTGUG00000005090	A1CF	100	85.786	ENSMAUG00000007422	A1cf	100	86.144	Mesocricetus_auratus
ENSTGUG00000005090	A1CF	100	85.977	ENSMICG00000003377	A1CF	100	85.977	Microcebus_murinus
ENSTGUG00000005090	A1CF	100	86.957	ENSMOCG00000021536	A1cf	100	86.957	Microtus_ochrogaster
ENSTGUG00000005090	A1CF	100	67.157	ENSMMOG00000009422	a1cf	100	68.627	Mola_mola
ENSTGUG00000005090	A1CF	90	87.890	ENSMODG00000016478	A1CF	99	88.073	Monodelphis_domestica
ENSTGUG00000005090	A1CF	100	72.803	ENSMALG00000012992	a1cf	100	72.471	Monopterus_albus
ENSTGUG00000005090	A1CF	100	85.786	MGP_CAROLIEiJ_G0022873	A1cf	100	85.953	Mus_caroli
ENSTGUG00000005090	A1CF	100	85.786	ENSMUSG00000052595	A1cf	99	90.526	Mus_musculus
ENSTGUG00000005090	A1CF	100	85.284	MGP_PahariEiJ_G0014366	A1cf	100	85.284	Mus_pahari
ENSTGUG00000005090	A1CF	100	85.619	MGP_SPRETEiJ_G0023792	A1cf	100	85.953	Mus_spretus
ENSTGUG00000005090	A1CF	100	81.773	ENSMPUG00000016971	A1CF	100	81.773	Mustela_putorius_furo
ENSTGUG00000005090	A1CF	100	86.957	ENSMLUG00000016071	A1CF	100	87.458	Myotis_lucifugus
ENSTGUG00000005090	A1CF	100	86.622	ENSNGAG00000015136	A1cf	100	87.145	Nannospalax_galili
ENSTGUG00000005090	A1CF	100	75.407	ENSNBRG00000001712	a1cf	100	77.524	Neolamprologus_brichardi
ENSTGUG00000005090	A1CF	100	87.625	ENSNLEG00000012028	A1CF	100	87.793	Nomascus_leucogenys
ENSTGUG00000005090	A1CF	94	86.903	ENSMEUG00000015909	A1CF	100	87.080	Notamacropus_eugenii
ENSTGUG00000005090	A1CF	88	79.658	ENSOPRG00000010667	A1CF	97	78.947	Ochotona_princeps
ENSTGUG00000005090	A1CF	100	76.384	ENSONIG00000019105	a1cf	100	77.850	Oreochromis_niloticus
ENSTGUG00000005090	A1CF	78	85.439	ENSOANG00000007360	A1CF	99	85.439	Ornithorhynchus_anatinus
ENSTGUG00000005090	A1CF	100	86.288	ENSOCUG00000011587	A1CF	100	86.288	Oryctolagus_cuniculus
ENSTGUG00000005090	A1CF	100	75.896	ENSORLG00000013342	a1cf	100	75.896	Oryzias_latipes
ENSTGUG00000005090	A1CF	100	77.073	ENSORLG00020000586	a1cf	100	77.236	Oryzias_latipes_hni
ENSTGUG00000005090	A1CF	100	77.073	ENSORLG00015018569	a1cf	100	77.236	Oryzias_latipes_hsok
ENSTGUG00000005090	A1CF	100	76.307	ENSOMEG00000013531	a1cf	100	76.307	Oryzias_melastigma
ENSTGUG00000005090	A1CF	100	86.455	ENSOGAG00000012884	A1CF	100	86.455	Otolemur_garnettii
ENSTGUG00000005090	A1CF	100	87.291	ENSOARG00000013695	A1CF	100	87.625	Ovis_aries
ENSTGUG00000005090	A1CF	97	85.690	ENSPPAG00000028115	A1CF	99	91.296	Pan_paniscus
ENSTGUG00000005090	A1CF	100	87.291	ENSPPRG00000012180	A1CF	100	87.667	Panthera_pardus
ENSTGUG00000005090	A1CF	100	87.291	ENSPTIG00000021223	A1CF	100	87.667	Panthera_tigris_altaica
ENSTGUG00000005090	A1CF	100	87.291	ENSPTRG00000002508	A1CF	100	87.458	Pan_troglodytes
ENSTGUG00000005090	A1CF	100	86.288	ENSPANG00000021988	A1CF	100	86.288	Papio_anubis
ENSTGUG00000005090	A1CF	100	81.426	ENSPKIG00000025176	a1cf	100	81.426	Paramormyrops_kingsleyae
ENSTGUG00000005090	A1CF	100	88.796	ENSPSIG00000010318	A1CF	100	88.796	Pelodiscus_sinensis
ENSTGUG00000005090	A1CF	98	66.497	ENSPMGG00000013359	a1cf	99	67.572	Periophthalmus_magnuspinnatus
ENSTGUG00000005090	A1CF	100	86.545	ENSPEMG00000015021	A1cf	100	86.545	Peromyscus_maniculatus_bairdii
ENSTGUG00000005090	A1CF	100	86.288	ENSPCIG00000002175	A1CF	100	86.455	Phascolarctos_cinereus
ENSTGUG00000005090	A1CF	100	76.748	ENSPFOG00000006683	a1cf	100	78.537	Poecilia_formosa
ENSTGUG00000005090	A1CF	100	76.585	ENSPFOG00000007437	-	100	78.374	Poecilia_formosa
ENSTGUG00000005090	A1CF	100	75.772	ENSPLAG00000001210	-	100	77.236	Poecilia_latipinna
ENSTGUG00000005090	A1CF	100	75.772	ENSPLAG00000000026	a1cf	100	77.236	Poecilia_latipinna
ENSTGUG00000005090	A1CF	100	69.984	ENSPMEG00000015529	-	100	71.452	Poecilia_mexicana
ENSTGUG00000005090	A1CF	100	68.842	ENSPMEG00000000921	a1cf	100	70.310	Poecilia_mexicana
ENSTGUG00000005090	A1CF	100	76.585	ENSPREG00000016298	a1cf	100	78.374	Poecilia_reticulata
ENSTGUG00000005090	A1CF	100	86.455	ENSPPYG00000002819	A1CF	100	86.622	Pongo_abelii
ENSTGUG00000005090	A1CF	70	76.344	ENSPCAG00000006463	A1CF	68	86.111	Procavia_capensis
ENSTGUG00000005090	A1CF	100	86.455	ENSPCOG00000024172	A1CF	100	86.789	Propithecus_coquereli
ENSTGUG00000005090	A1CF	100	76.710	ENSPNYG00000017944	a1cf	100	78.827	Pundamilia_nyererei
ENSTGUG00000005090	A1CF	100	80.298	ENSPNAG00000007704	a1cf	100	80.298	Pygocentrus_nattereri
ENSTGUG00000005090	A1CF	100	84.448	ENSRNOG00000033195	A1cf	100	84.615	Rattus_norvegicus
ENSTGUG00000005090	A1CF	100	81.167	ENSRBIG00000042892	A1CF	100	84.047	Rhinopithecus_bieti
ENSTGUG00000005090	A1CF	100	87.625	ENSRROG00000041398	A1CF	100	87.625	Rhinopithecus_roxellana
ENSTGUG00000005090	A1CF	100	87.625	ENSSBOG00000021930	A1CF	100	87.625	Saimiri_boliviensis_boliviensis
ENSTGUG00000005090	A1CF	100	88.294	ENSSHAG00000005096	A1CF	100	88.294	Sarcophilus_harrisii
ENSTGUG00000005090	A1CF	100	80.597	ENSSFOG00015011774	a1cf	100	81.260	Scleropages_formosus
ENSTGUG00000005090	A1CF	100	76.260	ENSSMAG00000013271	a1cf	100	76.585	Scophthalmus_maximus
ENSTGUG00000005090	A1CF	100	75.868	ENSSDUG00000013930	a1cf	100	77.190	Seriola_dumerili
ENSTGUG00000005090	A1CF	100	70.559	ENSSLDG00000004290	a1cf	100	70.066	Seriola_lalandi_dorsalis
ENSTGUG00000005090	A1CF	95	76.626	ENSSARG00000005940	A1CF	96	76.801	Sorex_araneus
ENSTGUG00000005090	A1CF	95	87.544	ENSSPUG00000006797	A1CF	95	87.368	Sphenodon_punctatus
ENSTGUG00000005090	A1CF	100	87.793	ENSSSCG00000010431	A1CF	100	88.127	Sus_scrofa
ENSTGUG00000005090	A1CF	100	75.244	ENSTRUG00000001982	a1cf	100	75.244	Takifugu_rubripes
ENSTGUG00000005090	A1CF	100	76.136	ENSTNIG00000003580	a1cf	100	76.461	Tetraodon_nigroviridis
ENSTGUG00000005090	A1CF	97	80.517	ENSTTRG00000013190	A1CF	95	80.862	Tursiops_truncatus
ENSTGUG00000005090	A1CF	100	85.953	ENSUAMG00000020065	A1CF	100	85.953	Ursus_americanus
ENSTGUG00000005090	A1CF	100	86.957	ENSUMAG00000011162	A1CF	100	86.957	Ursus_maritimus
ENSTGUG00000005090	A1CF	87	83.716	ENSVPAG00000006130	A1CF	86	83.716	Vicugna_pacos
ENSTGUG00000005090	A1CF	100	86.789	ENSVVUG00000002504	A1CF	99	88.603	Vulpes_vulpes
ENSTGUG00000005090	A1CF	100	79.402	ENSXETG00000006611	a1cf	100	79.402	Xenopus_tropicalis
ENSTGUG00000005090	A1CF	100	76.923	ENSXCOG00000003302	a1cf	100	77.905	Xiphophorus_couchianus
ENSTGUG00000005090	A1CF	100	78.069	ENSXMAG00000016703	a1cf	100	79.051	Xiphophorus_maculatus