EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000005095 (Gene tree)
Gene ID: 100190603
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 5568 bases
Position: chr2:65125908-65131475
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005245	LSM	PF01423.22	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005297	SNRPD1-201	934	-	ENSTGUP00000005245	119 (aa)	-	H0Z3V1

Gene Model

Click here to download ENSTGUG00000005095's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005095's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000005095	SNRPD1	75	32.584	ENSTGUG00000001600	-	58	33.803
ENSTGUG00000005095	SNRPD1	75	32.584	ENSTGUG00000001602	-	58	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005095	SNRPD1	97	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSTGUG00000005095	SNRPD1	97	96.522	ENSAPOG00000019446	snrpd1	63	96.522	Acanthochromis_polyacanthus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSAMEG00000002576	SNRPD1	98	100.000	Ailuropoda_melanoleuca
ENSTGUG00000005095	SNRPD1	94	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSAOCG00000007406	snrpd1	97	96.522	Amphiprion_ocellaris
ENSTGUG00000005095	SNRPD1	97	92.174	ENSAPEG00000014961	snrpd1	96	92.174	Amphiprion_percula
ENSTGUG00000005095	SNRPD1	94	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSTGUG00000005095	SNRPD1	97	96.522	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSTGUG00000005095	SNRPD1	100	99.160	ENSAPLG00000012256	SNRPD1	100	99.160	Anas_platyrhynchos
ENSTGUG00000005095	SNRPD1	97	100.000	ENSACAG00000006364	SNRPD1	97	100.000	Anolis_carolinensis
ENSTGUG00000005095	SNRPD1	97	100.000	ENSANAG00000025641	SNRPD1	97	100.000	Aotus_nancymaae
ENSTGUG00000005095	SNRPD1	94	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSTGUG00000005095	SNRPD1	97	97.391	ENSAMXG00000004589	snrpd1	97	97.391	Astyanax_mexicanus
ENSTGUG00000005095	SNRPD1	93	96.396	ENSBTAG00000012376	-	83	96.396	Bos_taurus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSBTAG00000008292	SNRPD1	97	100.000	Bos_taurus
ENSTGUG00000005095	SNRPD1	100	89.076	ENSBTAG00000055316	-	95	89.076	Bos_taurus
ENSTGUG00000005095	SNRPD1	92	95.455	ENSBTAG00000047266	-	92	95.455	Bos_taurus
ENSTGUG00000005095	SNRPD1	71	79.762	WBGene00004916	snr-3	73	75.000	Caenorhabditis_elegans
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCJAG00000042955	SNRPD1	97	100.000	Callithrix_jacchus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCAFG00000018247	SNRPD1	97	100.000	Canis_familiaris
ENSTGUG00000005095	SNRPD1	76	100.000	ENSCAFG00020015914	SNRPD1	71	100.000	Canis_lupus_dingo
ENSTGUG00000005095	SNRPD1	100	96.639	ENSCHIG00000005557	SNRPD1	100	96.639	Capra_hircus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSTSYG00000030028	SNRPD1	97	100.000	Carlito_syrichta
ENSTGUG00000005095	SNRPD1	97	99.130	ENSCAPG00000008103	SNRPD1	99	99.130	Cavia_aperea
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCPOG00000004679	SNRPD1	99	99.130	Cavia_porcellus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSCCAG00000016652	-	97	96.522	Cebus_capucinus
ENSTGUG00000005095	SNRPD1	97	99.130	ENSCCAG00000020611	-	97	99.130	Cebus_capucinus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCCAG00000032658	SNRPD1	97	100.000	Cebus_capucinus
ENSTGUG00000005095	SNRPD1	77	95.652	ENSCCAG00000005390	-	77	95.652	Cebus_capucinus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCATG00000039978	SNRPD1	97	100.000	Cercocebus_atys
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCLAG00000008691	SNRPD1	97	100.000	Chinchilla_lanigera
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCSAG00000017654	SNRPD1	97	100.000	Chlorocebus_sabaeus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSCPBG00000023143	SNRPD1	97	100.000	Chrysemys_picta_bellii
ENSTGUG00000005095	SNRPD1	71	85.714	ENSCING00000024100	-	67	85.714	Ciona_intestinalis
ENSTGUG00000005095	SNRPD1	71	83.529	ENSCSAVG00000004578	-	68	83.529	Ciona_savignyi
ENSTGUG00000005095	SNRPD1	100	98.319	ENSCGRG00001021055	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSTGUG00000005095	SNRPD1	77	75.000	ENSCGRG00001009945	-	81	75.000	Cricetulus_griseus_chok1gshd
ENSTGUG00000005095	SNRPD1	77	75.000	ENSCGRG00000006224	-	81	75.000	Cricetulus_griseus_crigri
ENSTGUG00000005095	SNRPD1	100	98.319	ENSCGRG00000000490	-	97	100.000	Cricetulus_griseus_crigri
ENSTGUG00000005095	SNRPD1	76	94.505	ENSCSEG00000018141	snrpd1	77	94.565	Cynoglossus_semilaevis
ENSTGUG00000005095	SNRPD1	97	96.522	ENSCVAG00000000534	snrpd1	97	96.522	Cyprinodon_variegatus
ENSTGUG00000005095	SNRPD1	97	97.391	ENSDARG00000011648	snrpd1	97	97.391	Danio_rerio
ENSTGUG00000005095	SNRPD1	97	100.000	ENSDNOG00000040310	SNRPD1	97	100.000	Dasypus_novemcinctus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSDORG00000008349	Snrpd1	97	100.000	Dipodomys_ordii
ENSTGUG00000005095	SNRPD1	76	82.222	FBgn0261933	SmD1	73	82.222	Drosophila_melanogaster
ENSTGUG00000005095	SNRPD1	74	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSTGUG00000005095	SNRPD1	91	92.593	ENSEBUG00000003170	snrpd1	91	92.593	Eptatretus_burgeri
ENSTGUG00000005095	SNRPD1	94	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSTGUG00000005095	SNRPD1	94	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSTGUG00000005095	SNRPD1	75	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSTGUG00000005095	SNRPD1	90	85.047	ENSELUG00000000088	snrpd1	76	95.556	Esox_lucius
ENSTGUG00000005095	SNRPD1	97	100.000	ENSFCAG00000012352	SNRPD1	97	100.000	Felis_catus
ENSTGUG00000005095	SNRPD1	94	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSTGUG00000005095	SNRPD1	97	97.391	ENSGMOG00000015607	snrpd1	97	97.391	Gadus_morhua
ENSTGUG00000005095	SNRPD1	97	100.000	ENSGALG00000041334	SNRPD1	97	100.000	Gallus_gallus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSGAFG00000011171	snrpd1	97	96.522	Gambusia_affinis
ENSTGUG00000005095	SNRPD1	97	97.391	ENSGACG00000005201	SNRPD1	97	97.391	Gasterosteus_aculeatus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSGAGG00000011197	SNRPD1	97	100.000	Gopherus_agassizii
ENSTGUG00000005095	SNRPD1	97	100.000	ENSGGOG00000041053	SNRPD1	97	100.000	Gorilla_gorilla
ENSTGUG00000005095	SNRPD1	77	94.565	ENSGGOG00000026706	-	77	94.565	Gorilla_gorilla
ENSTGUG00000005095	SNRPD1	97	96.522	ENSHBUG00000003236	snrpd1	97	96.522	Haplochromis_burtoni
ENSTGUG00000005095	SNRPD1	97	100.000	ENSHGLG00000007152	SNRPD1	97	100.000	Heterocephalus_glaber_female
ENSTGUG00000005095	SNRPD1	97	100.000	ENSHGLG00100008618	SNRPD1	97	100.000	Heterocephalus_glaber_male
ENSTGUG00000005095	SNRPD1	97	96.522	ENSIPUG00000003576	snrpd1	97	96.522	Ictalurus_punctatus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSSTOG00000000485	SNRPD1	97	100.000	Ictidomys_tridecemlineatus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSJJAG00000017698	Snrpd1	97	100.000	Jaculus_jaculus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSKMAG00000005987	snrpd1	97	96.522	Kryptolebias_marmoratus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSLBEG00000003327	snrpd1	97	96.522	Labrus_bergylta
ENSTGUG00000005095	SNRPD1	100	97.479	ENSLACG00000001955	SNRPD1	97	100.000	Latimeria_chalumnae
ENSTGUG00000005095	SNRPD1	98	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSLAFG00000005819	SNRPD1	97	100.000	Loxodonta_africana
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMFAG00000042080	SNRPD1	97	100.000	Macaca_fascicularis
ENSTGUG00000005095	SNRPD1	96	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMNEG00000041296	SNRPD1	97	100.000	Macaca_nemestrina
ENSTGUG00000005095	SNRPD1	98	99.145	ENSMLEG00000028659	SNRPD1	97	100.000	Mandrillus_leucophaeus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSMAMG00000012971	snrpd1	97	96.522	Mastacembelus_armatus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSMZEG00005004685	snrpd1	97	96.522	Maylandia_zebra
ENSTGUG00000005095	SNRPD1	99	100.000	ENSMGAG00000011598	SNRPD1	98	100.000	Meleagris_gallopavo
ENSTGUG00000005095	SNRPD1	77	83.696	ENSMAUG00000016467	-	83	83.696	Mesocricetus_auratus
ENSTGUG00000005095	SNRPD1	77	83.696	ENSMAUG00000016502	-	83	83.696	Mesocricetus_auratus
ENSTGUG00000005095	SNRPD1	85	93.069	ENSMAUG00000006829	-	65	93.069	Mesocricetus_auratus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMICG00000044066	SNRPD1	97	100.000	Microcebus_murinus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMOCG00000017367	Snrpd1	97	100.000	Microtus_ochrogaster
ENSTGUG00000005095	SNRPD1	97	96.522	ENSMMOG00000019089	snrpd1	97	96.522	Mola_mola
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSTGUG00000005095	SNRPD1	97	96.522	ENSMALG00000014459	snrpd1	97	96.522	Monopterus_albus
ENSTGUG00000005095	SNRPD1	97	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	97	100.000	Mus_caroli
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMUSG00000002477	Snrpd1	97	100.000	Mus_musculus
ENSTGUG00000005095	SNRPD1	97	100.000	MGP_PahariEiJ_G0018731	Snrpd1	97	100.000	Mus_pahari
ENSTGUG00000005095	SNRPD1	97	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	97	100.000	Mus_spretus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSMPUG00000005567	-	98	100.000	Mustela_putorius_furo
ENSTGUG00000005095	SNRPD1	97	99.130	ENSMPUG00000020041	-	97	99.130	Mustela_putorius_furo
ENSTGUG00000005095	SNRPD1	98	95.726	ENSMLUG00000009124	SNRPD1	91	95.726	Myotis_lucifugus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSNGAG00000023946	Snrpd1	97	100.000	Nannospalax_galili
ENSTGUG00000005095	SNRPD1	76	95.556	ENSNBRG00000012119	snrpd1	74	95.556	Neolamprologus_brichardi
ENSTGUG00000005095	SNRPD1	97	97.391	ENSNLEG00000031430	SNRPD1	97	97.391	Nomascus_leucogenys
ENSTGUG00000005095	SNRPD1	97	100.000	ENSODEG00000005764	SNRPD1	97	100.000	Octodon_degus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSONIG00000002486	snrpd1	97	96.522	Oreochromis_niloticus
ENSTGUG00000005095	SNRPD1	83	88.889	ENSOANG00000004638	-	83	88.889	Ornithorhynchus_anatinus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSOCUG00000023761	-	98	100.000	Oryctolagus_cuniculus
ENSTGUG00000005095	SNRPD1	97	99.130	ENSOCUG00000014399	-	97	99.130	Oryctolagus_cuniculus
ENSTGUG00000005095	SNRPD1	94	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSTGUG00000005095	SNRPD1	97	96.522	ENSORLG00020005743	snrpd1	97	96.522	Oryzias_latipes_hni
ENSTGUG00000005095	SNRPD1	97	96.522	ENSORLG00015013402	snrpd1	97	96.522	Oryzias_latipes_hsok
ENSTGUG00000005095	SNRPD1	97	96.522	ENSOMEG00000011571	snrpd1	97	96.522	Oryzias_melastigma
ENSTGUG00000005095	SNRPD1	97	100.000	ENSOGAG00000007833	SNRPD1	97	100.000	Otolemur_garnettii
ENSTGUG00000005095	SNRPD1	97	94.783	ENSOARG00000003413	-	82	94.783	Ovis_aries
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPPAG00000042593	SNRPD1	97	100.000	Pan_paniscus
ENSTGUG00000005095	SNRPD1	77	66.304	ENSPPRG00000005009	-	88	71.296	Panthera_pardus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPPRG00000002399	SNRPD1	97	100.000	Panthera_pardus
ENSTGUG00000005095	SNRPD1	96	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPTRG00000009909	SNRPD1	97	100.000	Pan_troglodytes
ENSTGUG00000005095	SNRPD1	82	93.878	ENSPTRG00000050159	-	84	93.878	Pan_troglodytes
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPANG00000023478	SNRPD1	97	100.000	Papio_anubis
ENSTGUG00000005095	SNRPD1	88	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSTGUG00000005095	SNRPD1	97	97.391	ENSPKIG00000003985	SNRPD1	97	97.391	Paramormyrops_kingsleyae
ENSTGUG00000005095	SNRPD1	97	96.522	ENSPMGG00000001862	snrpd1	97	96.522	Periophthalmus_magnuspinnatus
ENSTGUG00000005095	SNRPD1	100	98.319	ENSPEMG00000014773	-	97	100.000	Peromyscus_maniculatus_bairdii
ENSTGUG00000005095	SNRPD1	84	81.373	ENSPMAG00000003938	-	84	81.373	Petromyzon_marinus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSTGUG00000005095	SNRPD1	77	95.652	ENSPFOG00000012448	SNRPD1	81	95.652	Poecilia_formosa
ENSTGUG00000005095	SNRPD1	77	95.652	ENSPLAG00000006738	snrpd1	81	95.652	Poecilia_latipinna
ENSTGUG00000005095	SNRPD1	77	95.652	ENSPMEG00000021942	snrpd1	81	95.652	Poecilia_mexicana
ENSTGUG00000005095	SNRPD1	97	96.522	ENSPREG00000007094	snrpd1	97	96.522	Poecilia_reticulata
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPPYG00000025874	SNRPD1	97	100.000	Pongo_abelii
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPCOG00000013327	SNRPD1	97	100.000	Propithecus_coquereli
ENSTGUG00000005095	SNRPD1	97	100.000	ENSPVAG00000005511	SNRPD1	77	100.000	Pteropus_vampyrus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSPNAG00000017824	snrpd1	97	96.522	Pygocentrus_nattereri
ENSTGUG00000005095	SNRPD1	97	100.000	ENSRNOG00000013714	Snrpd1	97	100.000	Rattus_norvegicus
ENSTGUG00000005095	SNRPD1	98	99.145	ENSRBIG00000022996	SNRPD1	97	100.000	Rhinopithecus_bieti
ENSTGUG00000005095	SNRPD1	98	99.145	ENSRROG00000027640	SNRPD1	97	100.000	Rhinopithecus_roxellana
ENSTGUG00000005095	SNRPD1	97	100.000	ENSSBOG00000020998	SNRPD1	97	100.000	Saimiri_boliviensis_boliviensis
ENSTGUG00000005095	SNRPD1	97	100.000	ENSSHAG00000011791	SNRPD1	97	100.000	Sarcophilus_harrisii
ENSTGUG00000005095	SNRPD1	91	95.370	ENSSFOG00015022253	-	91	95.370	Scleropages_formosus
ENSTGUG00000005095	SNRPD1	91	95.370	ENSSFOG00015008809	-	91	95.370	Scleropages_formosus
ENSTGUG00000005095	SNRPD1	91	95.370	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSTGUG00000005095	SNRPD1	91	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSTGUG00000005095	SNRPD1	97	96.522	ENSSLDG00000011858	snrpd1	97	96.522	Seriola_lalandi_dorsalis
ENSTGUG00000005095	SNRPD1	56	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSSPUG00000002824	SNRPD1	97	100.000	Sphenodon_punctatus
ENSTGUG00000005095	SNRPD1	94	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSTGUG00000005095	SNRPD1	94	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSTGUG00000005095	SNRPD1	81	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSTGUG00000005095	SNRPD1	74	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSTGUG00000005095	SNRPD1	97	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSTGUG00000005095	SNRPD1	96	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSUMAG00000019740	SNRPD1	97	100.000	Ursus_maritimus
ENSTGUG00000005095	SNRPD1	97	100.000	ENSVPAG00000010056	SNRPD1	77	100.000	Vicugna_pacos
ENSTGUG00000005095	SNRPD1	94	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSTGUG00000005095	SNRPD1	97	98.261	ENSXETG00000027354	snrpd1	97	98.261	Xenopus_tropicalis
ENSTGUG00000005095	SNRPD1	97	96.522	ENSXCOG00000020108	snrpd1	97	96.522	Xiphophorus_couchianus
ENSTGUG00000005095	SNRPD1	97	96.522	ENSXMAG00000003368	snrpd1	97	96.522	Xiphophorus_maculatus