EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005117 (Gene tree)
Gene ID: -
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 21382 bases
Position: chr17:7255525-7276906
Accession: 445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005265	SEN1_N	PF12726.7	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005317	SETX-201	7422	-	ENSTGUP00000005265	2474 (aa)	-	H0Z3X1

Gene Model

Click here to download ENSTGUG00000005117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005117	SETX	86	71.833	ENSG00000107290	SETX	79	71.833	Homo_sapiens
ENSTGUG00000005117	SETX	55	45.455	ENSAMXG00000014406	-	86	42.390	Astyanax_mexicanus
ENSTGUG00000005117	SETX	86	73.167	ENSCJAG00000018245	SETX	79	73.167	Callithrix_jacchus
ENSTGUG00000005117	SETX	86	72.093	ENSCPOG00000001492	SETX	79	72.093	Cavia_porcellus
ENSTGUG00000005117	SETX	83	74.379	ENSCLAG00000012582	SETX	78	74.379	Chinchilla_lanigera
ENSTGUG00000005117	SETX	60	75.106	ENSETEG00000008111	-	57	75.106	Echinops_telfairi
ENSTGUG00000005117	SETX	84	72.667	ENSECAG00000012019	SETX	85	72.833	Equus_caballus
ENSTGUG00000005117	SETX	83	44.649	ENSELUG00000022536	-	80	44.649	Esox_lucius
ENSTGUG00000005117	SETX	86	72.546	ENSFCAG00000007102	SETX	79	72.546	Felis_catus
ENSTGUG00000005117	SETX	98	87.591	ENSFALG00000001464	SETX	99	87.591	Ficedula_albicollis
ENSTGUG00000005117	SETX	86	68.167	ENSGGOG00000027664	SETX	75	62.911	Gorilla_gorilla
ENSTGUG00000005117	SETX	84	45.634	ENSIPUG00000006685	setx	76	45.634	Ictalurus_punctatus
ENSTGUG00000005117	SETX	87	52.540	ENSLOCG00000004264	SETX	87	53.846	Lepisosteus_oculatus
ENSTGUG00000005117	SETX	85	70.256	ENSMOCG00000000848	Setx	80	69.915	Microtus_ochrogaster
ENSTGUG00000005117	SETX	81	70.376	MGP_PahariEiJ_G0024821	Setx	79	71.000	Mus_pahari
ENSTGUG00000005117	SETX	86	70.167	ENSNLEG00000012839	SETX	70	70.167	Nomascus_leucogenys
ENSTGUG00000005117	SETX	83	74.618	ENSOCUG00000005616	SETX	73	74.618	Oryctolagus_cuniculus
ENSTGUG00000005117	SETX	86	70.882	ENSOGAG00000013387	SETX	79	70.882	Otolemur_garnettii
ENSTGUG00000005117	SETX	86	72.167	ENSPPAG00000004108	SETX	79	72.047	Pan_paniscus
ENSTGUG00000005117	SETX	86	72.379	ENSPPRG00000012867	SETX	79	72.379	Panthera_pardus
ENSTGUG00000005117	SETX	86	72.379	ENSPTIG00000021101	SETX	79	72.379	Panthera_tigris_altaica
ENSTGUG00000005117	SETX	86	72.000	ENSPTRG00000021495	SETX	79	71.880	Pan_troglodytes
ENSTGUG00000005117	SETX	83	49.832	ENSPKIG00000025162	SETX	82	49.832	Paramormyrops_kingsleyae
ENSTGUG00000005117	SETX	97	65.557	ENSSPUG00000016332	SETX	89	69.378	Sphenodon_punctatus
ENSTGUG00000005117	SETX	86	72.546	ENSSSCG00000005724	SETX	78	74.662	Sus_scrofa
ENSTGUG00000005117	SETX	86	65.116	ENSXETG00000006254	setx	90	65.385	Xenopus_tropicalis