EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005138 (Gene tree)
Gene ID: 100222569
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 32040 bases
Position: chrZ:64079566-64111605
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005295	RTC	PF01137.21	2.7e-60	1	1
ENSTGUP00000005295	RTC_insert	PF05189.13	1.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005348	RCL1-201	1223	-	ENSTGUP00000005295	375 (aa)	-	H0Z401

Gene Model

Click here to download ENSTGUG00000005138's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005138	RCL1	100	85.067	ENSG00000120158	RCL1	100	85.067	Homo_sapiens
ENSTGUG00000005138	RCL1	99	75.000	ENSAPOG00000015666	rcl1	99	75.000	Acanthochromis_polyacanthus
ENSTGUG00000005138	RCL1	100	85.067	ENSAMEG00000002631	RCL1	100	85.067	Ailuropoda_melanoleuca
ENSTGUG00000005138	RCL1	99	73.925	ENSACIG00000021195	rcl1	99	73.925	Amphilophus_citrinellus
ENSTGUG00000005138	RCL1	99	73.925	ENSAOCG00000002223	rcl1	99	73.925	Amphiprion_ocellaris
ENSTGUG00000005138	RCL1	99	74.194	ENSAPEG00000006905	rcl1	99	74.194	Amphiprion_percula
ENSTGUG00000005138	RCL1	98	72.629	ENSATEG00000020026	rcl1	99	72.629	Anabas_testudineus
ENSTGUG00000005138	RCL1	88	93.939	ENSAPLG00000006031	RCL1	100	93.939	Anas_platyrhynchos
ENSTGUG00000005138	RCL1	100	82.667	ENSACAG00000003640	RCL1	100	82.667	Anolis_carolinensis
ENSTGUG00000005138	RCL1	100	84.267	ENSANAG00000037372	RCL1	100	84.267	Aotus_nancymaae
ENSTGUG00000005138	RCL1	99	74.462	ENSACLG00000021724	rcl1	99	74.462	Astatotilapia_calliptera
ENSTGUG00000005138	RCL1	98	76.216	ENSAMXG00000033394	rcl1	99	76.216	Astyanax_mexicanus
ENSTGUG00000005138	RCL1	99	44.974	WBGene00022852	ZK1127.5	99	44.974	Caenorhabditis_elegans
ENSTGUG00000005138	RCL1	100	85.067	ENSCJAG00000011202	RCL1	100	85.067	Callithrix_jacchus
ENSTGUG00000005138	RCL1	100	84.000	ENSCAFG00000002091	RCL1	100	84.000	Canis_familiaris
ENSTGUG00000005138	RCL1	100	84.267	ENSCAFG00020000638	RCL1	78	84.267	Canis_lupus_dingo
ENSTGUG00000005138	RCL1	100	84.267	ENSCHIG00000012407	RCL1	100	84.267	Capra_hircus
ENSTGUG00000005138	RCL1	88	85.714	ENSTSYG00000009592	RCL1	97	83.607	Carlito_syrichta
ENSTGUG00000005138	RCL1	66	74.691	ENSCAPG00000013575	RCL1	100	74.691	Cavia_aperea
ENSTGUG00000005138	RCL1	100	83.200	ENSCPOG00000015354	RCL1	100	83.200	Cavia_porcellus
ENSTGUG00000005138	RCL1	100	84.800	ENSCCAG00000033505	RCL1	100	84.800	Cebus_capucinus
ENSTGUG00000005138	RCL1	100	84.533	ENSCATG00000034721	RCL1	100	84.533	Cercocebus_atys
ENSTGUG00000005138	RCL1	100	83.733	ENSCLAG00000007445	RCL1	100	83.733	Chinchilla_lanigera
ENSTGUG00000005138	RCL1	100	85.067	ENSCSAG00000008811	RCL1	100	85.067	Chlorocebus_sabaeus
ENSTGUG00000005138	RCL1	87	71.692	ENSCHOG00000007216	RCL1	100	71.692	Choloepus_hoffmanni
ENSTGUG00000005138	RCL1	100	86.933	ENSCPBG00000025481	RCL1	94	87.613	Chrysemys_picta_bellii
ENSTGUG00000005138	RCL1	98	58.602	ENSCING00000019565	-	98	58.602	Ciona_intestinalis
ENSTGUG00000005138	RCL1	100	85.067	ENSCANG00000027099	RCL1	100	85.067	Colobus_angolensis_palliatus
ENSTGUG00000005138	RCL1	100	83.733	ENSCGRG00001013748	Rcl1	100	83.733	Cricetulus_griseus_chok1gshd
ENSTGUG00000005138	RCL1	88	85.152	ENSCGRG00000005843	Rcl1	99	85.152	Cricetulus_griseus_crigri
ENSTGUG00000005138	RCL1	99	74.731	ENSCSEG00000000712	rcl1	97	74.731	Cynoglossus_semilaevis
ENSTGUG00000005138	RCL1	99	75.538	ENSCVAG00000011536	rcl1	99	75.538	Cyprinodon_variegatus
ENSTGUG00000005138	RCL1	98	71.274	ENSDARG00000038312	rcl1	100	71.274	Danio_rerio
ENSTGUG00000005138	RCL1	71	83.521	ENSDNOG00000019911	RCL1	100	83.521	Dasypus_novemcinctus
ENSTGUG00000005138	RCL1	100	84.533	ENSDORG00000015645	Rcl1	100	84.533	Dipodomys_ordii
ENSTGUG00000005138	RCL1	99	55.236	FBgn0020909	Rtc1	99	55.236	Drosophila_melanogaster
ENSTGUG00000005138	RCL1	72	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSTGUG00000005138	RCL1	98	53.514	ENSEBUG00000016621	-	98	53.514	Eptatretus_burgeri
ENSTGUG00000005138	RCL1	100	83.733	ENSEASG00005010653	RCL1	100	83.733	Equus_asinus_asinus
ENSTGUG00000005138	RCL1	100	83.733	ENSECAG00000015973	RCL1	100	83.733	Equus_caballus
ENSTGUG00000005138	RCL1	100	71.733	ENSEEUG00000009801	RCL1	100	71.733	Erinaceus_europaeus
ENSTGUG00000005138	RCL1	99	71.774	ENSELUG00000007353	rcl1	99	71.774	Esox_lucius
ENSTGUG00000005138	RCL1	100	83.733	ENSFCAG00000014557	RCL1	100	83.733	Felis_catus
ENSTGUG00000005138	RCL1	95	91.317	ENSFALG00000010553	RCL1	94	91.317	Ficedula_albicollis
ENSTGUG00000005138	RCL1	88	84.498	ENSFDAG00000004209	RCL1	100	84.498	Fukomys_damarensis
ENSTGUG00000005138	RCL1	99	75.538	ENSFHEG00000011228	rcl1	99	75.538	Fundulus_heteroclitus
ENSTGUG00000005138	RCL1	99	71.774	ENSGMOG00000004677	rcl1	99	71.774	Gadus_morhua
ENSTGUG00000005138	RCL1	99	93.583	ENSGALG00000015024	RCL1	99	93.583	Gallus_gallus
ENSTGUG00000005138	RCL1	99	74.194	ENSGAFG00000007257	rcl1	99	74.194	Gambusia_affinis
ENSTGUG00000005138	RCL1	99	72.849	ENSGACG00000017474	rcl1	99	72.849	Gasterosteus_aculeatus
ENSTGUG00000005138	RCL1	100	87.200	ENSGAGG00000003689	RCL1	100	87.200	Gopherus_agassizii
ENSTGUG00000005138	RCL1	100	84.533	ENSGGOG00000015041	RCL1	100	84.533	Gorilla_gorilla
ENSTGUG00000005138	RCL1	99	74.194	ENSHBUG00000001393	rcl1	99	74.194	Haplochromis_burtoni
ENSTGUG00000005138	RCL1	100	82.933	ENSHGLG00000016452	RCL1	100	82.933	Heterocephalus_glaber_female
ENSTGUG00000005138	RCL1	100	70.667	ENSHGLG00000005368	-	100	70.667	Heterocephalus_glaber_female
ENSTGUG00000005138	RCL1	100	71.733	ENSHGLG00100018010	-	100	71.733	Heterocephalus_glaber_male
ENSTGUG00000005138	RCL1	100	77.600	ENSHGLG00100008718	-	100	77.600	Heterocephalus_glaber_male
ENSTGUG00000005138	RCL1	99	73.387	ENSHCOG00000020170	rcl1	99	73.387	Hippocampus_comes
ENSTGUG00000005138	RCL1	98	75.339	ENSIPUG00000018054	RCL1	99	75.339	Ictalurus_punctatus
ENSTGUG00000005138	RCL1	100	84.800	ENSSTOG00000000023	RCL1	100	84.800	Ictidomys_tridecemlineatus
ENSTGUG00000005138	RCL1	100	84.800	ENSJJAG00000022803	-	100	84.800	Jaculus_jaculus
ENSTGUG00000005138	RCL1	54	62.562	ENSJJAG00000000764	-	98	62.562	Jaculus_jaculus
ENSTGUG00000005138	RCL1	100	74.133	ENSJJAG00000015632	-	100	74.133	Jaculus_jaculus
ENSTGUG00000005138	RCL1	98	73.984	ENSKMAG00000011946	rcl1	99	73.984	Kryptolebias_marmoratus
ENSTGUG00000005138	RCL1	98	70.461	ENSLBEG00000003957	rcl1	99	70.461	Labrus_bergylta
ENSTGUG00000005138	RCL1	91	76.968	ENSLACG00000004594	RCL1	99	80.745	Latimeria_chalumnae
ENSTGUG00000005138	RCL1	99	77.898	ENSLOCG00000010148	rcl1	98	77.898	Lepisosteus_oculatus
ENSTGUG00000005138	RCL1	100	81.600	ENSLAFG00000017495	RCL1	100	81.600	Loxodonta_africana
ENSTGUG00000005138	RCL1	100	85.067	ENSMFAG00000037906	RCL1	100	85.067	Macaca_fascicularis
ENSTGUG00000005138	RCL1	100	85.067	ENSMNEG00000012288	RCL1	100	85.067	Macaca_nemestrina
ENSTGUG00000005138	RCL1	100	85.067	ENSMLEG00000043088	RCL1	100	85.067	Mandrillus_leucophaeus
ENSTGUG00000005138	RCL1	99	74.462	ENSMAMG00000008311	rcl1	99	74.462	Mastacembelus_armatus
ENSTGUG00000005138	RCL1	99	74.462	ENSMZEG00005017292	rcl1	99	74.462	Maylandia_zebra
ENSTGUG00000005138	RCL1	58	89.593	ENSMGAG00000002245	RCL1	100	89.593	Meleagris_gallopavo
ENSTGUG00000005138	RCL1	58	83.410	ENSMAUG00000008922	Rcl1	100	83.410	Mesocricetus_auratus
ENSTGUG00000005138	RCL1	100	83.200	ENSMICG00000015562	RCL1	100	83.200	Microcebus_murinus
ENSTGUG00000005138	RCL1	100	85.067	ENSMOCG00000012145	Rcl1	100	85.067	Microtus_ochrogaster
ENSTGUG00000005138	RCL1	98	72.162	ENSMMOG00000021264	rcl1	99	71.582	Mola_mola
ENSTGUG00000005138	RCL1	95	83.754	ENSMODG00000015377	RCL1	94	83.754	Monodelphis_domestica
ENSTGUG00000005138	RCL1	99	73.656	ENSMALG00000018618	rcl1	99	73.656	Monopterus_albus
ENSTGUG00000005138	RCL1	100	84.533	MGP_CAROLIEiJ_G0022853	Rcl1	100	84.533	Mus_caroli
ENSTGUG00000005138	RCL1	100	85.067	ENSMUSG00000024785	Rcl1	100	85.067	Mus_musculus
ENSTGUG00000005138	RCL1	100	85.067	MGP_PahariEiJ_G0014346	Rcl1	100	85.067	Mus_pahari
ENSTGUG00000005138	RCL1	100	84.533	MGP_SPRETEiJ_G0023771	Rcl1	100	84.533	Mus_spretus
ENSTGUG00000005138	RCL1	100	85.067	ENSMPUG00000004998	RCL1	100	85.067	Mustela_putorius_furo
ENSTGUG00000005138	RCL1	100	84.267	ENSMLUG00000009654	RCL1	100	84.267	Myotis_lucifugus
ENSTGUG00000005138	RCL1	100	85.067	ENSNGAG00000015327	Rcl1	100	85.067	Nannospalax_galili
ENSTGUG00000005138	RCL1	92	73.913	ENSNBRG00000019854	rcl1	96	71.667	Neolamprologus_brichardi
ENSTGUG00000005138	RCL1	100	82.133	ENSNLEG00000008891	RCL1	100	82.133	Nomascus_leucogenys
ENSTGUG00000005138	RCL1	100	77.600	ENSMEUG00000007653	RCL1	100	77.600	Notamacropus_eugenii
ENSTGUG00000005138	RCL1	100	85.333	ENSOPRG00000010965	RCL1	100	85.333	Ochotona_princeps
ENSTGUG00000005138	RCL1	88	70.958	ENSODEG00000004151	RCL1	96	70.958	Octodon_degus
ENSTGUG00000005138	RCL1	99	75.000	ENSONIG00000003871	rcl1	99	75.000	Oreochromis_niloticus
ENSTGUG00000005138	RCL1	67	79.216	ENSOANG00000013193	-	100	79.216	Ornithorhynchus_anatinus
ENSTGUG00000005138	RCL1	100	85.067	ENSOCUG00000008161	RCL1	100	85.067	Oryctolagus_cuniculus
ENSTGUG00000005138	RCL1	99	72.237	ENSORLG00000010443	rcl1	99	72.237	Oryzias_latipes
ENSTGUG00000005138	RCL1	99	72.237	ENSORLG00020012211	rcl1	99	72.237	Oryzias_latipes_hni
ENSTGUG00000005138	RCL1	99	71.968	ENSORLG00015001122	rcl1	99	71.968	Oryzias_latipes_hsok
ENSTGUG00000005138	RCL1	99	74.124	ENSOMEG00000022976	rcl1	87	74.124	Oryzias_melastigma
ENSTGUG00000005138	RCL1	100	84.000	ENSOGAG00000007480	RCL1	100	84.000	Otolemur_garnettii
ENSTGUG00000005138	RCL1	100	84.533	ENSOARG00000013463	RCL1	100	84.533	Ovis_aries
ENSTGUG00000005138	RCL1	100	85.333	ENSPPAG00000037958	RCL1	100	85.333	Pan_paniscus
ENSTGUG00000005138	RCL1	100	83.200	ENSPPRG00000022645	RCL1	100	83.200	Panthera_pardus
ENSTGUG00000005138	RCL1	87	85.366	ENSPTIG00000019031	RCL1	100	83.410	Panthera_tigris_altaica
ENSTGUG00000005138	RCL1	100	85.067	ENSPTRG00000020743	RCL1	100	85.067	Pan_troglodytes
ENSTGUG00000005138	RCL1	100	85.067	ENSPANG00000025151	RCL1	100	85.067	Papio_anubis
ENSTGUG00000005138	RCL1	99	73.118	ENSPKIG00000021022	rcl1	99	73.118	Paramormyrops_kingsleyae
ENSTGUG00000005138	RCL1	88	87.576	ENSPSIG00000012302	RCL1	100	87.576	Pelodiscus_sinensis
ENSTGUG00000005138	RCL1	99	72.581	ENSPMGG00000024007	rcl1	99	72.581	Periophthalmus_magnuspinnatus
ENSTGUG00000005138	RCL1	100	84.800	ENSPEMG00000023275	Rcl1	100	84.800	Peromyscus_maniculatus_bairdii
ENSTGUG00000005138	RCL1	95	30.387	ENSPMAG00000009110	rtca	95	30.387	Petromyzon_marinus
ENSTGUG00000005138	RCL1	100	84.000	ENSPCIG00000000188	RCL1	100	84.000	Phascolarctos_cinereus
ENSTGUG00000005138	RCL1	99	74.194	ENSPFOG00000019682	rcl1	99	74.194	Poecilia_formosa
ENSTGUG00000005138	RCL1	99	74.462	ENSPLAG00000022354	rcl1	99	74.462	Poecilia_latipinna
ENSTGUG00000005138	RCL1	99	74.194	ENSPMEG00000008131	rcl1	99	74.194	Poecilia_mexicana
ENSTGUG00000005138	RCL1	99	74.194	ENSPREG00000008032	rcl1	99	74.194	Poecilia_reticulata
ENSTGUG00000005138	RCL1	100	85.333	ENSPPYG00000019244	RCL1	100	85.333	Pongo_abelii
ENSTGUG00000005138	RCL1	100	75.733	ENSPCAG00000001440	RCL1	100	75.733	Procavia_capensis
ENSTGUG00000005138	RCL1	100	84.533	ENSPCOG00000009611	RCL1	100	84.533	Propithecus_coquereli
ENSTGUG00000005138	RCL1	100	84.000	ENSPVAG00000015752	RCL1	100	84.000	Pteropus_vampyrus
ENSTGUG00000005138	RCL1	99	74.462	ENSPNYG00000012910	rcl1	99	74.462	Pundamilia_nyererei
ENSTGUG00000005138	RCL1	98	75.815	ENSPNAG00000028307	rcl1	90	75.815	Pygocentrus_nattereri
ENSTGUG00000005138	RCL1	100	84.800	ENSRNOG00000015491	Rcl1	100	84.800	Rattus_norvegicus
ENSTGUG00000005138	RCL1	100	84.800	ENSRBIG00000035818	RCL1	100	84.800	Rhinopithecus_bieti
ENSTGUG00000005138	RCL1	100	85.067	ENSRROG00000029781	RCL1	100	85.067	Rhinopithecus_roxellana
ENSTGUG00000005138	RCL1	98	36.658	YOL010W	-	97	36.658	Saccharomyces_cerevisiae
ENSTGUG00000005138	RCL1	100	84.533	ENSSBOG00000026369	RCL1	100	84.533	Saimiri_boliviensis_boliviensis
ENSTGUG00000005138	RCL1	89	83.434	ENSSHAG00000014086	RCL1	100	83.434	Sarcophilus_harrisii
ENSTGUG00000005138	RCL1	99	74.731	ENSSFOG00015023020	rcl1	99	74.731	Scleropages_formosus
ENSTGUG00000005138	RCL1	99	72.849	ENSSMAG00000019751	rcl1	85	72.849	Scophthalmus_maximus
ENSTGUG00000005138	RCL1	99	74.731	ENSSDUG00000006349	rcl1	99	74.731	Seriola_dumerili
ENSTGUG00000005138	RCL1	99	74.462	ENSSLDG00000022076	rcl1	99	74.462	Seriola_lalandi_dorsalis
ENSTGUG00000005138	RCL1	100	85.067	ENSSARG00000009260	RCL1	100	85.067	Sorex_araneus
ENSTGUG00000005138	RCL1	100	86.133	ENSSPUG00000016330	RCL1	100	86.133	Sphenodon_punctatus
ENSTGUG00000005138	RCL1	99	74.462	ENSSPAG00000018038	rcl1	99	74.462	Stegastes_partitus
ENSTGUG00000005138	RCL1	100	85.067	ENSSSCG00000005217	RCL1	83	85.067	Sus_scrofa
ENSTGUG00000005138	RCL1	98	73.171	ENSTRUG00000010493	rcl1	99	73.171	Takifugu_rubripes
ENSTGUG00000005138	RCL1	98	73.171	ENSTNIG00000013214	rcl1	98	73.171	Tetraodon_nigroviridis
ENSTGUG00000005138	RCL1	100	78.667	ENSTBEG00000016339	RCL1	100	78.667	Tupaia_belangeri
ENSTGUG00000005138	RCL1	100	84.000	ENSTTRG00000016525	RCL1	100	84.000	Tursiops_truncatus
ENSTGUG00000005138	RCL1	100	85.067	ENSUAMG00000005598	RCL1	100	85.890	Ursus_americanus
ENSTGUG00000005138	RCL1	88	85.714	ENSUMAG00000017890	RCL1	97	85.714	Ursus_maritimus
ENSTGUG00000005138	RCL1	88	86.018	ENSVPAG00000009188	RCL1	100	86.018	Vicugna_pacos
ENSTGUG00000005138	RCL1	88	85.758	ENSVVUG00000007304	RCL1	89	85.758	Vulpes_vulpes
ENSTGUG00000005138	RCL1	100	70.213	ENSXETG00000000592	rcl1	100	70.213	Xenopus_tropicalis
ENSTGUG00000005138	RCL1	57	30.698	ENSXCOG00000008002	rtca	62	30.698	Xiphophorus_couchianus
ENSTGUG00000005138	RCL1	99	74.462	ENSXCOG00000004922	rcl1	99	74.462	Xiphophorus_couchianus
ENSTGUG00000005138	RCL1	99	74.462	ENSXMAG00000022366	RCL1	99	74.462	Xiphophorus_maculatus