EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005154 (Gene tree)
Gene ID: 100226387
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 7684 bases
Position: chr8:8113947-8121630
Accession: 100226387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005340	RTC	PF01137.21	1.9e-86	1	1
ENSTGUP00000005340	RTC_insert	PF05189.13	4.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005393	RTCA-201	1697	XM_002188396	ENSTGUP00000005340	365 (aa)	XP_002188432	H0Z446

Gene Model

Click here to download ENSTGUG00000005154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005154	RTCA	100	83.880	ENSG00000137996	RTCA	100	83.880	Homo_sapiens
ENSTGUG00000005154	RTCA	100	69.041	ENSAPOG00000001345	rtca	99	69.041	Acanthochromis_polyacanthus
ENSTGUG00000005154	RTCA	73	81.413	ENSAMEG00000008855	RTCA	100	81.413	Ailuropoda_melanoleuca
ENSTGUG00000005154	RTCA	100	68.767	ENSACIG00000019643	rtca	100	68.767	Amphilophus_citrinellus
ENSTGUG00000005154	RTCA	100	68.767	ENSAOCG00000014979	rtca	99	68.767	Amphiprion_ocellaris
ENSTGUG00000005154	RTCA	100	68.767	ENSAPEG00000006945	rtca	99	68.767	Amphiprion_percula
ENSTGUG00000005154	RTCA	100	67.397	ENSATEG00000006315	rtca	100	67.397	Anabas_testudineus
ENSTGUG00000005154	RTCA	96	91.501	ENSAPLG00000015430	RTCA	100	91.501	Anas_platyrhynchos
ENSTGUG00000005154	RTCA	100	82.240	ENSANAG00000025446	RTCA	100	82.240	Aotus_nancymaae
ENSTGUG00000005154	RTCA	100	68.493	ENSACLG00000020770	rtca	99	68.493	Astatotilapia_calliptera
ENSTGUG00000005154	RTCA	98	71.031	ENSAMXG00000043271	rtca	98	71.031	Astyanax_mexicanus
ENSTGUG00000005154	RTCA	100	83.880	ENSBTAG00000006321	RTCA	100	83.880	Bos_taurus
ENSTGUG00000005154	RTCA	100	83.060	ENSCJAG00000003398	RTCA	100	83.060	Callithrix_jacchus
ENSTGUG00000005154	RTCA	100	82.787	ENSCAFG00000020010	RTCA	68	82.787	Canis_familiaris
ENSTGUG00000005154	RTCA	100	82.787	ENSCAFG00020011528	RTCA	57	82.787	Canis_lupus_dingo
ENSTGUG00000005154	RTCA	100	83.607	ENSCHIG00000018937	RTCA	100	83.607	Capra_hircus
ENSTGUG00000005154	RTCA	100	82.240	ENSTSYG00000011305	RTCA	100	82.240	Carlito_syrichta
ENSTGUG00000005154	RTCA	100	82.240	ENSCCAG00000021844	RTCA	100	82.240	Cebus_capucinus
ENSTGUG00000005154	RTCA	100	80.475	ENSCATG00000019364	RTCA	100	82.848	Cercocebus_atys
ENSTGUG00000005154	RTCA	87	82.595	ENSCLAG00000006125	RTCA	100	82.595	Chinchilla_lanigera
ENSTGUG00000005154	RTCA	100	83.607	ENSCSAG00000001509	RTCA	100	83.607	Chlorocebus_sabaeus
ENSTGUG00000005154	RTCA	100	82.514	ENSCHOG00000005211	RTCA	100	82.514	Choloepus_hoffmanni
ENSTGUG00000005154	RTCA	100	90.137	ENSCPBG00000026658	RTCA	100	90.137	Chrysemys_picta_bellii
ENSTGUG00000005154	RTCA	99	54.396	ENSCING00000007875	-	99	54.396	Ciona_intestinalis
ENSTGUG00000005154	RTCA	99	53.846	ENSCSAVG00000007269	-	99	53.846	Ciona_savignyi
ENSTGUG00000005154	RTCA	100	83.333	ENSCANG00000040106	RTCA	100	83.333	Colobus_angolensis_palliatus
ENSTGUG00000005154	RTCA	73	81.413	ENSCGRG00001013163	Rtca	85	81.413	Cricetulus_griseus_chok1gshd
ENSTGUG00000005154	RTCA	98	66.295	ENSCSEG00000000530	rtca	96	66.295	Cynoglossus_semilaevis
ENSTGUG00000005154	RTCA	100	56.522	ENSCVAG00000021809	rtca	100	56.522	Cyprinodon_variegatus
ENSTGUG00000005154	RTCA	100	70.959	ENSDARG00000002215	rtca	100	70.959	Danio_rerio
ENSTGUG00000005154	RTCA	100	81.967	ENSDNOG00000000456	RTCA	100	81.967	Dasypus_novemcinctus
ENSTGUG00000005154	RTCA	100	82.787	ENSDORG00000005448	Rtca	100	82.787	Dipodomys_ordii
ENSTGUG00000005154	RTCA	99	39.394	FBgn0025630	Rtca	99	39.394	Drosophila_melanogaster
ENSTGUG00000005154	RTCA	93	57.018	ENSEBUG00000008556	rtca	94	57.018	Eptatretus_burgeri
ENSTGUG00000005154	RTCA	100	83.333	ENSEASG00005015926	RTCA	100	83.333	Equus_asinus_asinus
ENSTGUG00000005154	RTCA	100	83.333	ENSECAG00000019831	RTCA	100	83.333	Equus_caballus
ENSTGUG00000005154	RTCA	91	74.566	ENSEEUG00000001165	RTCA	100	74.566	Erinaceus_europaeus
ENSTGUG00000005154	RTCA	99	68.611	ENSELUG00000003741	rtca	99	68.611	Esox_lucius
ENSTGUG00000005154	RTCA	100	83.060	ENSFCAG00000024460	RTCA	100	83.060	Felis_catus
ENSTGUG00000005154	RTCA	91	98.799	ENSFALG00000002443	RTCA	90	98.799	Ficedula_albicollis
ENSTGUG00000005154	RTCA	98	65.470	ENSFDAG00000016084	-	100	65.470	Fukomys_damarensis
ENSTGUG00000005154	RTCA	100	82.514	ENSFDAG00000012070	-	100	82.514	Fukomys_damarensis
ENSTGUG00000005154	RTCA	55	69.154	ENSFHEG00000002868	rtca	92	66.359	Fundulus_heteroclitus
ENSTGUG00000005154	RTCA	100	67.123	ENSGMOG00000013264	rtca	100	67.123	Gadus_morhua
ENSTGUG00000005154	RTCA	100	93.151	ENSGALG00000005277	RTCA	100	93.151	Gallus_gallus
ENSTGUG00000005154	RTCA	100	68.767	ENSGAFG00000011853	rtca	99	68.767	Gambusia_affinis
ENSTGUG00000005154	RTCA	100	67.671	ENSGACG00000013497	rtca	100	67.671	Gasterosteus_aculeatus
ENSTGUG00000005154	RTCA	80	90.444	ENSGAGG00000023306	RTCA	100	90.444	Gopherus_agassizii
ENSTGUG00000005154	RTCA	100	83.607	ENSGGOG00000009546	-	100	83.607	Gorilla_gorilla
ENSTGUG00000005154	RTCA	100	82.787	ENSGGOG00000044018	-	100	82.787	Gorilla_gorilla
ENSTGUG00000005154	RTCA	100	68.493	ENSHBUG00000002114	rtca	99	68.493	Haplochromis_burtoni
ENSTGUG00000005154	RTCA	100	82.240	ENSHGLG00000002617	RTCA	100	82.240	Heterocephalus_glaber_female
ENSTGUG00000005154	RTCA	100	82.240	ENSHGLG00100006056	RTCA	100	82.240	Heterocephalus_glaber_male
ENSTGUG00000005154	RTCA	100	63.014	ENSHCOG00000020628	rtca	89	63.014	Hippocampus_comes
ENSTGUG00000005154	RTCA	100	70.411	ENSIPUG00000024803	rtca	100	70.411	Ictalurus_punctatus
ENSTGUG00000005154	RTCA	100	73.497	ENSSTOG00000033099	-	100	73.497	Ictidomys_tridecemlineatus
ENSTGUG00000005154	RTCA	100	77.049	ENSSTOG00000013528	-	100	77.049	Ictidomys_tridecemlineatus
ENSTGUG00000005154	RTCA	100	59.836	ENSJJAG00000016178	Rtca	100	59.836	Jaculus_jaculus
ENSTGUG00000005154	RTCA	100	69.041	ENSKMAG00000006651	rtca	99	69.041	Kryptolebias_marmoratus
ENSTGUG00000005154	RTCA	99	67.778	ENSLBEG00000028971	rtca	99	67.778	Labrus_bergylta
ENSTGUG00000005154	RTCA	88	67.500	ENSLBEG00000002448	-	99	67.500	Labrus_bergylta
ENSTGUG00000005154	RTCA	100	74.521	ENSLACG00000013666	RTCA	100	74.521	Latimeria_chalumnae
ENSTGUG00000005154	RTCA	100	68.493	ENSLOCG00000000093	rtca	99	68.493	Lepisosteus_oculatus
ENSTGUG00000005154	RTCA	100	81.967	ENSLAFG00000001473	RTCA	100	81.967	Loxodonta_africana
ENSTGUG00000005154	RTCA	100	83.607	ENSMFAG00000034132	RTCA	100	83.607	Macaca_fascicularis
ENSTGUG00000005154	RTCA	100	83.607	ENSMMUG00000019105	RTCA	100	83.607	Macaca_mulatta
ENSTGUG00000005154	RTCA	84	83.172	ENSMNEG00000037163	RTCA	100	83.172	Macaca_nemestrina
ENSTGUG00000005154	RTCA	100	68.852	ENSMLEG00000042151	RTCA	100	68.852	Mandrillus_leucophaeus
ENSTGUG00000005154	RTCA	100	70.685	ENSMAMG00000016536	rtca	100	70.685	Mastacembelus_armatus
ENSTGUG00000005154	RTCA	100	68.493	ENSMZEG00005017945	rtca	99	68.493	Maylandia_zebra
ENSTGUG00000005154	RTCA	87	92.767	ENSMGAG00000006892	RTCA	99	92.767	Meleagris_gallopavo
ENSTGUG00000005154	RTCA	100	81.967	ENSMAUG00000008488	Rtca	100	81.967	Mesocricetus_auratus
ENSTGUG00000005154	RTCA	84	83.172	ENSMICG00000008643	RTCA	100	83.172	Microcebus_murinus
ENSTGUG00000005154	RTCA	100	82.787	ENSMOCG00000016660	Rtca	100	82.787	Microtus_ochrogaster
ENSTGUG00000005154	RTCA	84	69.481	ENSMMOG00000007750	rtca	100	69.481	Mola_mola
ENSTGUG00000005154	RTCA	100	81.967	ENSMODG00000003557	RTCA	100	81.967	Monodelphis_domestica
ENSTGUG00000005154	RTCA	100	70.137	ENSMALG00000020844	rtca	100	70.137	Monopterus_albus
ENSTGUG00000005154	RTCA	100	82.240	MGP_CAROLIEiJ_G0025565	Rtca	100	82.394	Mus_caroli
ENSTGUG00000005154	RTCA	100	81.694	ENSMUSG00000000339	Rtca	100	82.394	Mus_musculus
ENSTGUG00000005154	RTCA	100	82.514	MGP_PahariEiJ_G0027011	Rtca	100	83.099	Mus_pahari
ENSTGUG00000005154	RTCA	100	81.967	MGP_SPRETEiJ_G0026515	Rtca	100	81.967	Mus_spretus
ENSTGUG00000005154	RTCA	100	82.787	ENSMPUG00000012119	RTCA	100	82.787	Mustela_putorius_furo
ENSTGUG00000005154	RTCA	100	78.474	ENSMLUG00000009922	RTCA	100	78.474	Myotis_lucifugus
ENSTGUG00000005154	RTCA	100	81.421	ENSNGAG00000011540	Rtca	99	81.421	Nannospalax_galili
ENSTGUG00000005154	RTCA	100	68.493	ENSNBRG00000003062	rtca	99	68.493	Neolamprologus_brichardi
ENSTGUG00000005154	RTCA	100	83.607	ENSNLEG00000031426	RTCA	100	83.607	Nomascus_leucogenys
ENSTGUG00000005154	RTCA	58	79.268	ENSMEUG00000010030	-	77	66.667	Notamacropus_eugenii
ENSTGUG00000005154	RTCA	73	78.067	ENSOPRG00000012092	RTCA	71	78.067	Ochotona_princeps
ENSTGUG00000005154	RTCA	95	82.471	ENSODEG00000006990	RTCA	96	82.621	Octodon_degus
ENSTGUG00000005154	RTCA	100	68.493	ENSONIG00000007753	rtca	99	68.493	Oreochromis_niloticus
ENSTGUG00000005154	RTCA	87	81.073	ENSOANG00000012055	RTCA	98	81.073	Ornithorhynchus_anatinus
ENSTGUG00000005154	RTCA	100	83.333	ENSOCUG00000014247	RTCA	100	83.333	Oryctolagus_cuniculus
ENSTGUG00000005154	RTCA	100	68.219	ENSORLG00000013605	rtca	100	68.219	Oryzias_latipes
ENSTGUG00000005154	RTCA	100	68.219	ENSORLG00020001904	rtca	100	68.219	Oryzias_latipes_hni
ENSTGUG00000005154	RTCA	100	67.945	ENSORLG00015021064	rtca	100	67.945	Oryzias_latipes_hsok
ENSTGUG00000005154	RTCA	100	69.589	ENSOMEG00000000756	rtca	100	69.589	Oryzias_melastigma
ENSTGUG00000005154	RTCA	100	75.137	ENSOGAG00000005627	RTCA	100	75.137	Otolemur_garnettii
ENSTGUG00000005154	RTCA	87	82.704	ENSOARG00000018122	RTCA	100	82.704	Ovis_aries
ENSTGUG00000005154	RTCA	100	80.739	ENSPPAG00000035119	RTCA	100	83.172	Pan_paniscus
ENSTGUG00000005154	RTCA	100	83.060	ENSPPRG00000000350	RTCA	100	83.060	Panthera_pardus
ENSTGUG00000005154	RTCA	100	82.787	ENSPTIG00000012816	RTCA	100	82.787	Panthera_tigris_altaica
ENSTGUG00000005154	RTCA	100	80.211	ENSPTRG00000001004	RTCA	100	82.524	Pan_troglodytes
ENSTGUG00000005154	RTCA	100	83.880	ENSPANG00000000346	RTCA	100	83.880	Papio_anubis
ENSTGUG00000005154	RTCA	100	71.233	ENSPKIG00000001653	rtca	100	71.233	Paramormyrops_kingsleyae
ENSTGUG00000005154	RTCA	100	89.863	ENSPSIG00000011408	RTCA	100	89.863	Pelodiscus_sinensis
ENSTGUG00000005154	RTCA	100	82.240	ENSPEMG00000018582	Rtca	100	82.240	Peromyscus_maniculatus_bairdii
ENSTGUG00000005154	RTCA	99	55.956	ENSPMAG00000009110	rtca	99	55.495	Petromyzon_marinus
ENSTGUG00000005154	RTCA	100	83.060	ENSPCIG00000007684	RTCA	100	83.060	Phascolarctos_cinereus
ENSTGUG00000005154	RTCA	100	69.126	ENSPFOG00000004824	rtca	100	69.126	Poecilia_formosa
ENSTGUG00000005154	RTCA	100	69.315	ENSPLAG00000011753	rtca	99	69.315	Poecilia_latipinna
ENSTGUG00000005154	RTCA	100	69.315	ENSPMEG00000020469	rtca	99	69.315	Poecilia_mexicana
ENSTGUG00000005154	RTCA	100	70.137	ENSPREG00000001365	rtca	99	70.137	Poecilia_reticulata
ENSTGUG00000005154	RTCA	100	83.333	ENSPPYG00000001115	RTCA	100	83.333	Pongo_abelii
ENSTGUG00000005154	RTCA	99	80.609	ENSPCAG00000005076	RTCA	99	80.609	Procavia_capensis
ENSTGUG00000005154	RTCA	100	83.880	ENSPCOG00000005603	RTCA	100	83.880	Propithecus_coquereli
ENSTGUG00000005154	RTCA	100	79.156	ENSPVAG00000009478	RTCA	100	79.156	Pteropus_vampyrus
ENSTGUG00000005154	RTCA	100	68.493	ENSPNYG00000004722	rtca	99	68.493	Pundamilia_nyererei
ENSTGUG00000005154	RTCA	100	70.959	ENSPNAG00000022270	rtca	100	70.959	Pygocentrus_nattereri
ENSTGUG00000005154	RTCA	100	82.514	ENSRNOG00000014575	Rtca	100	82.514	Rattus_norvegicus
ENSTGUG00000005154	RTCA	100	80.211	ENSRBIG00000041180	RTCA	100	82.524	Rhinopithecus_bieti
ENSTGUG00000005154	RTCA	100	83.060	ENSRROG00000024929	RTCA	100	83.060	Rhinopithecus_roxellana
ENSTGUG00000005154	RTCA	100	82.240	ENSSBOG00000028626	RTCA	100	82.240	Saimiri_boliviensis_boliviensis
ENSTGUG00000005154	RTCA	100	83.060	ENSSHAG00000001758	RTCA	100	83.060	Sarcophilus_harrisii
ENSTGUG00000005154	RTCA	98	66.574	ENSSMAG00000014680	rtca	97	66.574	Scophthalmus_maximus
ENSTGUG00000005154	RTCA	98	68.802	ENSSDUG00000015585	rtca	97	68.802	Seriola_dumerili
ENSTGUG00000005154	RTCA	96	68.857	ENSSLDG00000018985	rtca	95	68.857	Seriola_lalandi_dorsalis
ENSTGUG00000005154	RTCA	87	78.233	ENSSARG00000013993	RTCA	100	78.233	Sorex_araneus
ENSTGUG00000005154	RTCA	100	69.315	ENSSPAG00000011938	rtca	99	69.315	Stegastes_partitus
ENSTGUG00000005154	RTCA	100	83.607	ENSSSCG00000006865	RTCA	100	83.607	Sus_scrofa
ENSTGUG00000005154	RTCA	100	69.863	ENSTRUG00000008799	rtca	100	69.863	Takifugu_rubripes
ENSTGUG00000005154	RTCA	100	69.041	ENSTNIG00000004725	rtca	100	69.041	Tetraodon_nigroviridis
ENSTGUG00000005154	RTCA	59	72.727	ENSTBEG00000000943	RTCA	82	56.303	Tupaia_belangeri
ENSTGUG00000005154	RTCA	100	78.892	ENSTTRG00000015327	RTCA	100	78.892	Tursiops_truncatus
ENSTGUG00000005154	RTCA	93	81.525	ENSUAMG00000017265	RTCA	96	81.525	Ursus_americanus
ENSTGUG00000005154	RTCA	100	82.514	ENSUMAG00000007881	RTCA	100	82.514	Ursus_maritimus
ENSTGUG00000005154	RTCA	87	74.448	ENSVPAG00000001039	RTCA	84	74.448	Vicugna_pacos
ENSTGUG00000005154	RTCA	100	82.514	ENSVVUG00000022041	RTCA	68	82.514	Vulpes_vulpes
ENSTGUG00000005154	RTCA	99	63.488	ENSXETG00000031661	RTCA	99	63.488	Xenopus_tropicalis
ENSTGUG00000005154	RTCA	100	61.370	ENSXCOG00000008002	rtca	100	61.370	Xiphophorus_couchianus
ENSTGUG00000005154	RTCA	100	69.315	ENSXMAG00000005482	rtca	99	69.315	Xiphophorus_maculatus