EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTGUG00000005237 (Gene tree)
Gene ID
-
Gene Symbol
POLR1B
Alias
FLJ10816|FLJ21921|RPA2|Rpo1-2
Full Name
RNA polymerase I subunit B
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Minus strand
Length
13172 bases
Position
chr3:20138605-20151776
Accession
20454
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000005426RNA_pol_Rpa2_4PF06883.121.7e-1911
ENSTGUP00000005426RNA_pol_Rpb2_1PF04563.151.9e-2711
ENSTGUP00000005426RNA_pol_Rpb2_2PF04561.142e-1111
ENSTGUP00000005426RNA_pol_Rpb2_3PF04565.163.1e-2711
ENSTGUP00000005426RNA_pol_Rpb2_7PF04560.209.2e-2111
ENSTGUP00000005426RNA_pol_Rpb2_6PF00562.281.3e-11611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000005480POLR1B-2013108-ENSTGUP000000054261035 (aa)-H0Z4D1
Gene Model
Click here to download ENSTGUG00000005237's gene model file
Pathways
Pathway IDPathway NameSource
tgu03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005237's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000005237POLR1B9974.300ENSG00000125630POLR1B9976.585Homo_sapiens
ENSTGUG00000005237POLR1B10069.884ENSAPOG00000000931polr1b9169.884Acanthochromis_polyacanthus
ENSTGUG00000005237POLR1B9974.300ENSAMEG00000010826POLR1B9174.203Ailuropoda_melanoleuca
ENSTGUG00000005237POLR1B10071.139ENSACIG00000002290polr1b9171.139Amphilophus_citrinellus
ENSTGUG00000005237POLR1B10070.174ENSAOCG00000004249polr1b9170.174Amphiprion_ocellaris
ENSTGUG00000005237POLR1B10070.077ENSAPEG00000004971polr1b9170.077Amphiprion_percula
ENSTGUG00000005237POLR1B10070.656ENSATEG00000010957polr1b9170.656Anabas_testudineus
ENSTGUG00000005237POLR1B10087.175ENSAPLG00000004142POLR1B9687.175Anas_platyrhynchos
ENSTGUG00000005237POLR1B6773.188ENSACAG00000007117-9973.188Anolis_carolinensis
ENSTGUG00000005237POLR1B9974.253ENSANAG00000026201POLR1B9573.875Aotus_nancymaae
ENSTGUG00000005237POLR1B10070.946ENSACLG00000019089polr1b9170.946Astatotilapia_calliptera
ENSTGUG00000005237POLR1B10070.560ENSAMXG00000037818polr1b9170.560Astyanax_mexicanus
ENSTGUG00000005237POLR1B8630.640ENSBTAG00000019366POLR2B9030.640Bos_taurus
ENSTGUG00000005237POLR1B9973.720ENSBTAG00000014166POLR1B9173.623Bos_taurus
ENSTGUG00000005237POLR1B10046.825WBGene00008781rpoa-29346.635Caenorhabditis_elegans
ENSTGUG00000005237POLR1B9974.493ENSCJAG00000016433POLR1B9574.143Callithrix_jacchus
ENSTGUG00000005237POLR1B9974.493ENSCAFG00000007174POLR1B9174.396Canis_familiaris
ENSTGUG00000005237POLR1B9974.493ENSCAFG00020017367POLR1B9174.396Canis_lupus_dingo
ENSTGUG00000005237POLR1B9974.010ENSCHIG00000014527POLR1B9173.913Capra_hircus
ENSTGUG00000005237POLR1B9974.300ENSTSYG00000003669POLR1B9573.592Carlito_syrichta
ENSTGUG00000005237POLR1B9573.475ENSCAPG00000012821POLR1B8273.210Cavia_aperea
ENSTGUG00000005237POLR1B9972.754ENSCPOG00000015744POLR1B9172.657Cavia_porcellus
ENSTGUG00000005237POLR1B9974.493ENSCCAG00000035252POLR1B9574.143Cebus_capucinus
ENSTGUG00000005237POLR1B9974.396ENSCATG00000037382POLR1B9574.045Cercocebus_atys
ENSTGUG00000005237POLR1B9032.945ENSCATG00000035334POLR3B8732.749Cercocebus_atys
ENSTGUG00000005237POLR1B9973.043ENSCLAG00000004899POLR1B9172.947Chinchilla_lanigera
ENSTGUG00000005237POLR1B9974.203ENSCSAG00000016783POLR1B9174.106Chlorocebus_sabaeus
ENSTGUG00000005237POLR1B9472.268ENSCHOG00000007229POLR1B9972.136Choloepus_hoffmanni
ENSTGUG00000005237POLR1B9930.601ENSCPBG00000023199POLR3B9130.474Chrysemys_picta_bellii
ENSTGUG00000005237POLR1B9976.329ENSCPBG00000003962POLR1B9976.706Chrysemys_picta_bellii
ENSTGUG00000005237POLR1B10054.746ENSCING00000003329-9154.938Ciona_intestinalis
ENSTGUG00000005237POLR1B9137.425ENSCSAVG00000007982-8537.200Ciona_savignyi
ENSTGUG00000005237POLR1B9741.638ENSCSAVG00000000129-8241.638Ciona_savignyi
ENSTGUG00000005237POLR1B9974.589ENSCANG00000039531POLR1B9574.241Colobus_angolensis_palliatus
ENSTGUG00000005237POLR1B9973.816ENSCGRG00001014254Polr1b9173.720Cricetulus_griseus_chok1gshd
ENSTGUG00000005237POLR1B9973.816ENSCGRG00000017847Polr1b9173.720Cricetulus_griseus_crigri
ENSTGUG00000005237POLR1B10070.077ENSCSEG00000008564polr1b9169.981Cynoglossus_semilaevis
ENSTGUG00000005237POLR1B10070.174ENSCVAG00000005824polr1b9170.077Cyprinodon_variegatus
ENSTGUG00000005237POLR1B10069.981ENSDARG00000077469polr1b9169.981Danio_rerio
ENSTGUG00000005237POLR1B9930.126ENSDARG00000062915polr3b9130.000Danio_rerio
ENSTGUG00000005237POLR1B9974.010ENSDNOG00000017718POLR1B8973.913Dasypus_novemcinctus
ENSTGUG00000005237POLR1B9973.816ENSDORG00000014309Polr1b9173.720Dipodomys_ordii
ENSTGUG00000005237POLR1B9945.969FBgn0003278RpI1359145.969Drosophila_melanogaster
ENSTGUG00000005237POLR1B8874.286ENSETEG00000004001POLR1B8174.161Echinops_telfairi
ENSTGUG00000005237POLR1B6932.380ENSETEG00000017715POLR3B6832.380Echinops_telfairi
ENSTGUG00000005237POLR1B6967.347ENSEBUG00000015791polr1b9955.375Eptatretus_burgeri
ENSTGUG00000005237POLR1B8631.237ENSEBUG00000010186-8531.090Eptatretus_burgeri
ENSTGUG00000005237POLR1B9441.224ENSEASG00005021189POLR3B9040.741Equus_asinus_asinus
ENSTGUG00000005237POLR1B9974.686ENSEASG00005006504POLR1B9174.589Equus_asinus_asinus
ENSTGUG00000005237POLR1B9974.493ENSECAG00000010062POLR1B9174.396Equus_caballus
ENSTGUG00000005237POLR1B6735.000ENSEEUG00000009798POLR2B6135.000Erinaceus_europaeus
ENSTGUG00000005237POLR1B7977.397ENSEEUG00000004559-7677.055Erinaceus_europaeus
ENSTGUG00000005237POLR1B10070.753ENSELUG00000019627polr1b9170.753Esox_lucius
ENSTGUG00000005237POLR1B9930.262ENSELUG00000023988polr3b9530.136Esox_lucius
ENSTGUG00000005237POLR1B9974.010ENSFCAG00000008091POLR1B9573.204Felis_catus
ENSTGUG00000005237POLR1B9895.842ENSFALG00000000717POLR1B10095.842Ficedula_albicollis
ENSTGUG00000005237POLR1B9972.754ENSFDAG00000020976POLR1B9172.657Fukomys_damarensis
ENSTGUG00000005237POLR1B7639.628ENSFHEG00000008215polr3b7139.252Fundulus_heteroclitus
ENSTGUG00000005237POLR1B8670.876ENSFHEG00000000533polr1b8470.876Fundulus_heteroclitus
ENSTGUG00000005237POLR1B9930.583ENSGMOG00000004212polr3b9130.458Gadus_morhua
ENSTGUG00000005237POLR1B9165.042ENSGMOG00000005847polr1b9065.042Gadus_morhua
ENSTGUG00000005237POLR1B10087.536ENSGALG00000032273POLR1B9387.536Gallus_gallus
ENSTGUG00000005237POLR1B10069.884ENSGAFG00000001383polr1b9169.884Gambusia_affinis
ENSTGUG00000005237POLR1B10068.497ENSGACG00000003012polr1b9168.497Gasterosteus_aculeatus
ENSTGUG00000005237POLR1B9976.135ENSGAGG00000016312POLR1B9976.181Gopherus_agassizii
ENSTGUG00000005237POLR1B9930.650ENSGAGG00000014364POLR3B9030.522Gopherus_agassizii
ENSTGUG00000005237POLR1B9974.300ENSGGOG00000013494POLR1B9574.203Gorilla_gorilla
ENSTGUG00000005237POLR1B10070.946ENSHBUG00000012650polr1b9170.946Haplochromis_burtoni
ENSTGUG00000005237POLR1B9972.754ENSHGLG00000011497POLR1B9172.657Heterocephalus_glaber_female
ENSTGUG00000005237POLR1B9972.293ENSHGLG00100009371POLR1B9172.195Heterocephalus_glaber_male
ENSTGUG00000005237POLR1B10068.533ENSHCOG00000000709polr1b9168.436Hippocampus_comes
ENSTGUG00000005237POLR1B10070.367ENSIPUG00000018216polr1b9170.367Ictalurus_punctatus
ENSTGUG00000005237POLR1B9973.816ENSSTOG00000008160POLR1B9673.720Ictidomys_tridecemlineatus
ENSTGUG00000005237POLR1B9176.159ENSJJAG00000000143Polr1b8575.938Jaculus_jaculus
ENSTGUG00000005237POLR1B8838.086ENSJJAG00000016101Polr2b8538.086Jaculus_jaculus
ENSTGUG00000005237POLR1B10070.077ENSKMAG00000016037polr1b9170.077Kryptolebias_marmoratus
ENSTGUG00000005237POLR1B10067.568ENSLBEG00000027396polr1b9167.857Labrus_bergylta
ENSTGUG00000005237POLR1B10072.490ENSLACG00000009481POLR1B9172.394Latimeria_chalumnae
ENSTGUG00000005237POLR1B10072.008ENSLOCG00000016558polr1b9171.911Lepisosteus_oculatus
ENSTGUG00000005237POLR1B8630.745ENSLAFG00000003198POLR2B9730.745Loxodonta_africana
ENSTGUG00000005237POLR1B9973.892ENSLAFG00000007659POLR1B9075.226Loxodonta_africana
ENSTGUG00000005237POLR1B9974.396ENSMFAG00000032912POLR1B9574.045Macaca_fascicularis
ENSTGUG00000005237POLR1B9974.396ENSMMUG00000009468POLR1B9574.045Macaca_mulatta
ENSTGUG00000005237POLR1B9974.493ENSMNEG00000036047POLR1B9574.143Macaca_nemestrina
ENSTGUG00000005237POLR1B9974.143ENSMLEG00000030588POLR1B9974.540Mandrillus_leucophaeus
ENSTGUG00000005237POLR1B10070.849ENSMAMG00000013118polr1b9170.849Mastacembelus_armatus
ENSTGUG00000005237POLR1B10070.946ENSMZEG00005011850polr1b9170.946Maylandia_zebra
ENSTGUG00000005237POLR1B9430.361ENSMZEG00005018987polr3b9030.361Maylandia_zebra
ENSTGUG00000005237POLR1B10088.042ENSMGAG00000007074POLR1B9988.042Meleagris_gallopavo
ENSTGUG00000005237POLR1B8474.545ENSMAUG00000010593Polr1b8774.545Mesocricetus_auratus
ENSTGUG00000005237POLR1B9974.396ENSMICG00000013245POLR1B9573.592Microcebus_murinus
ENSTGUG00000005237POLR1B9973.430ENSMOCG00000005942Polr1b9173.333Microtus_ochrogaster
ENSTGUG00000005237POLR1B10069.431ENSMMOG00000008388polr1b9169.431Mola_mola
ENSTGUG00000005237POLR1B9974.106ENSMODG00000006573POLR1B9174.010Monodelphis_domestica
ENSTGUG00000005237POLR1B10069.015ENSMALG00000008958polr1b9169.015Monopterus_albus
ENSTGUG00000005237POLR1B9973.527MGP_CAROLIEiJ_G0024281Polr1b9673.430Mus_caroli
ENSTGUG00000005237POLR1B9972.947ENSMUSG00000027395Polr1b9172.850Mus_musculus
ENSTGUG00000005237POLR1B9973.140MGP_PahariEiJ_G0025726Polr1b9173.043Mus_pahari
ENSTGUG00000005237POLR1B9973.043MGP_SPRETEiJ_G0025201Polr1b9172.947Mus_spretus
ENSTGUG00000005237POLR1B9969.884ENSMPUG00000009644POLR1B9169.788Mustela_putorius_furo
ENSTGUG00000005237POLR1B9973.623ENSMLUG00000004910POLR1B9173.527Myotis_lucifugus
ENSTGUG00000005237POLR1B9930.071ENSMLUG00000026319-9030.071Myotis_lucifugus
ENSTGUG00000005237POLR1B9973.623ENSNGAG00000021472Polr1b9173.527Nannospalax_galili
ENSTGUG00000005237POLR1B10070.753ENSNBRG00000017979polr1b9170.753Neolamprologus_brichardi
ENSTGUG00000005237POLR1B9974.045ENSNLEG00000001656POLR1B9974.310Nomascus_leucogenys
ENSTGUG00000005237POLR1B6630.254ENSMEUG00000002576POLR3B6230.067Notamacropus_eugenii
ENSTGUG00000005237POLR1B7679.545ENSMEUG00000013915POLR1B7079.070Notamacropus_eugenii
ENSTGUG00000005237POLR1B9930.197ENSOPRG00000008124POLR2B9030.197Ochotona_princeps
ENSTGUG00000005237POLR1B9974.203ENSOPRG00000012742POLR1B9174.106Ochotona_princeps
ENSTGUG00000005237POLR1B6339.024ENSOPRG00000008568POLR3B5839.024Ochotona_princeps
ENSTGUG00000005237POLR1B9966.763ENSODEG00000005501POLR1B9166.667Octodon_degus
ENSTGUG00000005237POLR1B10070.946ENSONIG00000010382polr1b9170.946Oreochromis_niloticus
ENSTGUG00000005237POLR1B9974.203ENSOANG00000003621POLR1B9974.106Ornithorhynchus_anatinus
ENSTGUG00000005237POLR1B9974.396ENSOCUG00000006058POLR1B9174.300Oryctolagus_cuniculus
ENSTGUG00000005237POLR1B10069.913ENSORLG00000000890polr1b9169.913Oryzias_latipes
ENSTGUG00000005237POLR1B9930.260ENSORLG00000011064polr3b9130.135Oryzias_latipes
ENSTGUG00000005237POLR1B9930.260ENSORLG00020021474polr3b9030.135Oryzias_latipes_hni
ENSTGUG00000005237POLR1B10069.913ENSORLG00015011105polr1b9169.913Oryzias_latipes_hsok
ENSTGUG00000005237POLR1B9930.260ENSORLG00015012016polr3b9230.135Oryzias_latipes_hsok
ENSTGUG00000005237POLR1B10069.913ENSOMEG00000005073polr1b9169.913Oryzias_melastigma
ENSTGUG00000005237POLR1B9974.010ENSOGAG00000007367POLR1B8973.913Otolemur_garnettii
ENSTGUG00000005237POLR1B9974.035ENSOARG00000020904POLR1B9173.938Ovis_aries
ENSTGUG00000005237POLR1B9974.300ENSPPAG00000002774POLR1B9573.947Pan_paniscus
ENSTGUG00000005237POLR1B9973.913ENSPPRG00000005760POLR1B9573.107Panthera_pardus
ENSTGUG00000005237POLR1B9974.010ENSPTIG00000013496POLR1B9573.204Panthera_tigris_altaica
ENSTGUG00000005237POLR1B9974.396ENSPTRG00000012366POLR1B9574.045Pan_troglodytes
ENSTGUG00000005237POLR1B9974.396ENSPANG00000023423POLR1B9574.045Papio_anubis
ENSTGUG00000005237POLR1B10069.402ENSPKIG00000007536polr1b9169.305Paramormyrops_kingsleyae
ENSTGUG00000005237POLR1B9740.580ENSPKIG00000000008polr2b8352.174Paramormyrops_kingsleyae
ENSTGUG00000005237POLR1B9930.273ENSPSIG00000015650POLR3B9630.146Pelodiscus_sinensis
ENSTGUG00000005237POLR1B9976.039ENSPSIG00000002443POLR1B9575.942Pelodiscus_sinensis
ENSTGUG00000005237POLR1B10069.788ENSPMGG00000021622polr1b9169.788Periophthalmus_magnuspinnatus
ENSTGUG00000005237POLR1B9973.816ENSPEMG00000008619Polr1b9173.720Peromyscus_maniculatus_bairdii
ENSTGUG00000005237POLR1B7731.610ENSPMAG00000001164-9331.610Petromyzon_marinus
ENSTGUG00000005237POLR1B9974.686ENSPCIG00000029738POLR1B8774.589Phascolarctos_cinereus
ENSTGUG00000005237POLR1B9430.489ENSPCIG00000009510POLR3B9030.489Phascolarctos_cinereus
ENSTGUG00000005237POLR1B10069.595ENSPFOG00000010484polr1b9169.595Poecilia_formosa
ENSTGUG00000005237POLR1B10069.595ENSPLAG00000007518polr1b9169.595Poecilia_latipinna
ENSTGUG00000005237POLR1B10069.788ENSPMEG00000006810polr1b9169.691Poecilia_mexicana
ENSTGUG00000005237POLR1B10069.884ENSPREG00000002867polr1b9169.788Poecilia_reticulata
ENSTGUG00000005237POLR1B9974.396ENSPPYG00000012168POLR1B9174.300Pongo_abelii
ENSTGUG00000005237POLR1B9469.474ENSPCAG00000013293POLR1B8669.474Procavia_capensis
ENSTGUG00000005237POLR1B7749.606ENSPCAG00000000881POLR3B7149.606Procavia_capensis
ENSTGUG00000005237POLR1B9974.686ENSPCOG00000015852POLR1B9573.883Propithecus_coquereli
ENSTGUG00000005237POLR1B6032.945ENSPCOG00000014476POLR3B6232.749Propithecus_coquereli
ENSTGUG00000005237POLR1B9668.283ENSPVAG00000005727POLR1B8768.283Pteropus_vampyrus
ENSTGUG00000005237POLR1B8537.046ENSPVAG00000010951POLR2B7537.046Pteropus_vampyrus
ENSTGUG00000005237POLR1B10070.946ENSPNYG00000004767polr1b9170.946Pundamilia_nyererei
ENSTGUG00000005237POLR1B10070.367ENSPNAG00000013503polr1b8770.367Pygocentrus_nattereri
ENSTGUG00000005237POLR1B9968.517ENSRNOG00000018349Polr1b9168.421Rattus_norvegicus
ENSTGUG00000005237POLR1B9974.010ENSRBIG00000019757POLR1B9573.555Rhinopithecus_bieti
ENSTGUG00000005237POLR1B10030.832YOR207CRET19030.707Saccharomyces_cerevisiae
ENSTGUG00000005237POLR1B10043.911YPR010CRPA1359043.790Saccharomyces_cerevisiae
ENSTGUG00000005237POLR1B9974.589ENSSBOG00000024562POLR1B9574.241Saimiri_boliviensis_boliviensis
ENSTGUG00000005237POLR1B9969.080ENSSFOG00015004632polr1b9069.080Scleropages_formosus
ENSTGUG00000005237POLR1B10069.788ENSSMAG00000013682polr1b9169.788Scophthalmus_maximus
ENSTGUG00000005237POLR1B10070.560ENSSDUG00000019471polr1b9170.560Seriola_dumerili
ENSTGUG00000005237POLR1B8973.918ENSSPUG00000014298POLR1B10073.810Sphenodon_punctatus
ENSTGUG00000005237POLR1B10070.077ENSSPAG00000006345polr1b9170.077Stegastes_partitus
ENSTGUG00000005237POLR1B9974.493ENSSSCG00000008098POLR1B9169.372Sus_scrofa
ENSTGUG00000005237POLR1B9430.402ENSSSCG00000000169POLR3B9030.402Sus_scrofa
ENSTGUG00000005237POLR1B10069.981ENSTRUG00000006581polr1b9169.981Takifugu_rubripes
ENSTGUG00000005237POLR1B9930.135ENSTRUG00000008680polr3b9330.009Takifugu_rubripes
ENSTGUG00000005237POLR1B8630.535ENSTRUG00000008631POLR2B9030.535Takifugu_rubripes
ENSTGUG00000005237POLR1B9930.233ENSTNIG00000012138polr3b9130.108Tetraodon_nigroviridis
ENSTGUG00000005237POLR1B10068.919ENSTNIG00000002722polr1b9168.919Tetraodon_nigroviridis
ENSTGUG00000005237POLR1B7743.396ENSTBEG00000017278POLR3B6842.966Tupaia_belangeri
ENSTGUG00000005237POLR1B7539.024ENSTTRG00000010682POLR3B7039.024Tursiops_truncatus
ENSTGUG00000005237POLR1B9973.720ENSTTRG00000010988POLR1B9173.623Tursiops_truncatus
ENSTGUG00000005237POLR1B9974.300ENSUAMG00000022527-9474.203Ursus_americanus
ENSTGUG00000005237POLR1B6032.945ENSUAMG00000024267POLR3B9332.749Ursus_americanus
ENSTGUG00000005237POLR1B9974.300ENSUMAG00000008619POLR1B9974.203Ursus_maritimus
ENSTGUG00000005237POLR1B9374.839ENSVPAG00000011111POLR1B8574.839Vicugna_pacos
ENSTGUG00000005237POLR1B7238.514ENSVPAG00000010478POLR3B6537.671Vicugna_pacos
ENSTGUG00000005237POLR1B8839.024ENSVVUG00000023101POLR3B9039.024Vulpes_vulpes
ENSTGUG00000005237POLR1B9974.783ENSVVUG00000028670POLR1B9574.686Vulpes_vulpes
ENSTGUG00000005237POLR1B9971.304ENSXETG00000013749polr1b9171.208Xenopus_tropicalis
ENSTGUG00000005237POLR1B10069.595ENSXCOG00000006080polr1b9169.595Xiphophorus_couchianus
ENSTGUG00000005237POLR1B10069.691ENSXMAG00000007723polr1b9169.691Xiphophorus_maculatus

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