EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005253 (Gene tree)
Gene ID: 100230227
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 5720 bases
Position: chr8:8147149-8152868
Accession: 100230227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005418	TRM13	PF05206.14	9.1e-92	1	1
ENSTGUP00000005418	zf-U11-48K	PF05253.12	2e-11	1	1
ENSTGUP00000005418	zf-TRM13_CCCH	PF11722.8	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005472	TRMT13-201	1586	XM_002188137	ENSTGUP00000005418	461 (aa)	XP_002188173	H0Z4C3

Gene Model

Click here to download ENSTGUG00000005253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005253	TRMT13	100	66.026	ENSG00000122435	TRMT13	97	66.026	Homo_sapiens
ENSTGUG00000005253	TRMT13	98	48.884	ENSAPOG00000015131	trmt13	99	49.290	Acanthochromis_polyacanthus
ENSTGUG00000005253	TRMT13	100	66.880	ENSAMEG00000008917	TRMT13	97	66.880	Ailuropoda_melanoleuca
ENSTGUG00000005253	TRMT13	99	53.503	ENSACIG00000005804	trmt13	96	51.717	Amphilophus_citrinellus
ENSTGUG00000005253	TRMT13	98	49.696	ENSAOCG00000023585	trmt13	99	49.696	Amphiprion_ocellaris
ENSTGUG00000005253	TRMT13	98	49.493	ENSAPEG00000004025	trmt13	99	49.493	Amphiprion_percula
ENSTGUG00000005253	TRMT13	98	54.860	ENSATEG00000006597	trmt13	96	54.860	Anabas_testudineus
ENSTGUG00000005253	TRMT13	91	81.690	ENSAPLG00000014924	TRMT13	100	81.690	Anas_platyrhynchos
ENSTGUG00000005253	TRMT13	98	67.763	ENSACAG00000003498	TRMT13	97	67.763	Anolis_carolinensis
ENSTGUG00000005253	TRMT13	100	66.026	ENSANAG00000019525	TRMT13	97	66.026	Aotus_nancymaae
ENSTGUG00000005253	TRMT13	98	55.748	ENSACLG00000020018	trmt13	99	55.748	Astatotilapia_calliptera
ENSTGUG00000005253	TRMT13	98	55.246	ENSAMXG00000017963	trmt13	97	56.103	Astyanax_mexicanus
ENSTGUG00000005253	TRMT13	100	66.453	ENSBTAG00000015781	TRMT13	97	66.453	Bos_taurus
ENSTGUG00000005253	TRMT13	100	64.530	ENSCJAG00000000200	TRMT13	90	75.188	Callithrix_jacchus
ENSTGUG00000005253	TRMT13	67	64.331	ENSCAFG00000020021	TRMT13	99	64.331	Canis_familiaris
ENSTGUG00000005253	TRMT13	56	73.359	ENSCAFG00020011572	TRMT13	91	72.797	Canis_lupus_dingo
ENSTGUG00000005253	TRMT13	100	66.453	ENSCHIG00000015395	TRMT13	97	66.453	Capra_hircus
ENSTGUG00000005253	TRMT13	100	64.179	ENSTSYG00000010811	TRMT13	92	75.269	Carlito_syrichta
ENSTGUG00000005253	TRMT13	74	49.711	ENSCAPG00000009085	TRMT13	95	51.734	Cavia_aperea
ENSTGUG00000005253	TRMT13	100	65.451	ENSCPOG00000000694	TRMT13	97	65.451	Cavia_porcellus
ENSTGUG00000005253	TRMT13	100	66.453	ENSCCAG00000023772	TRMT13	97	66.453	Cebus_capucinus
ENSTGUG00000005253	TRMT13	100	66.026	ENSCATG00000033556	TRMT13	97	66.026	Cercocebus_atys
ENSTGUG00000005253	TRMT13	91	65.330	ENSCLAG00000008220	TRMT13	100	65.728	Chinchilla_lanigera
ENSTGUG00000005253	TRMT13	100	66.026	ENSCSAG00000001506	TRMT13	97	66.026	Chlorocebus_sabaeus
ENSTGUG00000005253	TRMT13	100	75.269	ENSCPBG00000026671	TRMT13	97	75.269	Chrysemys_picta_bellii
ENSTGUG00000005253	TRMT13	100	66.239	ENSCANG00000034659	TRMT13	97	66.239	Colobus_angolensis_palliatus
ENSTGUG00000005253	TRMT13	98	65.721	ENSCGRG00001021601	Trmt13	95	65.721	Cricetulus_griseus_chok1gshd
ENSTGUG00000005253	TRMT13	52	59.677	ENSCGRG00000000093	-	96	59.677	Cricetulus_griseus_crigri
ENSTGUG00000005253	TRMT13	98	51.310	ENSCSEG00000000591	trmt13	98	51.310	Cynoglossus_semilaevis
ENSTGUG00000005253	TRMT13	98	52.442	ENSCVAG00000017342	trmt13	93	53.503	Cyprinodon_variegatus
ENSTGUG00000005253	TRMT13	98	60.088	ENSDARG00000102846	trmt13	96	60.088	Danio_rerio
ENSTGUG00000005253	TRMT13	56	71.863	ENSDNOG00000001710	TRMT13	80	71.863	Dasypus_novemcinctus
ENSTGUG00000005253	TRMT13	98	64.069	ENSDORG00000015808	Trmt13	95	64.069	Dipodomys_ordii
ENSTGUG00000005253	TRMT13	98	34.244	FBgn0037435	CG18048	96	33.958	Drosophila_melanogaster
ENSTGUG00000005253	TRMT13	98	57.019	ENSETEG00000005819	TRMT13	96	57.019	Echinops_telfairi
ENSTGUG00000005253	TRMT13	97	48.478	ENSEBUG00000014444	trmt13	96	48.478	Eptatretus_burgeri
ENSTGUG00000005253	TRMT13	100	67.094	ENSEASG00005015918	TRMT13	97	67.094	Equus_asinus_asinus
ENSTGUG00000005253	TRMT13	100	67.094	ENSECAG00000022626	TRMT13	97	67.094	Equus_caballus
ENSTGUG00000005253	TRMT13	76	61.672	ENSEEUG00000000294	TRMT13	74	61.672	Erinaceus_europaeus
ENSTGUG00000005253	TRMT13	98	55.991	ENSELUG00000003803	trmt13	97	55.991	Esox_lucius
ENSTGUG00000005253	TRMT13	100	66.453	ENSFCAG00000030618	TRMT13	97	66.453	Felis_catus
ENSTGUG00000005253	TRMT13	99	93.696	ENSFALG00000002424	TRMT13	97	93.696	Ficedula_albicollis
ENSTGUG00000005253	TRMT13	98	66.157	ENSFDAG00000006342	TRMT13	95	66.157	Fukomys_damarensis
ENSTGUG00000005253	TRMT13	82	55.471	ENSFHEG00000022954	trmt13	97	55.890	Fundulus_heteroclitus
ENSTGUG00000005253	TRMT13	97	51.562	ENSGMOG00000013223	trmt13	100	51.096	Gadus_morhua
ENSTGUG00000005253	TRMT13	97	79.510	ENSGALG00000005290	TRMT13	96	79.470	Gallus_gallus
ENSTGUG00000005253	TRMT13	82	53.093	ENSGAFG00000001577	trmt13	85	53.093	Gambusia_affinis
ENSTGUG00000005253	TRMT13	98	54.605	ENSGACG00000013428	trmt13	97	54.825	Gasterosteus_aculeatus
ENSTGUG00000005253	TRMT13	100	75.322	ENSGAGG00000023303	TRMT13	95	84.674	Gopherus_agassizii
ENSTGUG00000005253	TRMT13	100	65.812	ENSGGOG00000005616	TRMT13	97	65.812	Gorilla_gorilla
ENSTGUG00000005253	TRMT13	98	56.061	ENSHBUG00000007754	trmt13	99	56.061	Haplochromis_burtoni
ENSTGUG00000005253	TRMT13	98	66.157	ENSHGLG00000002164	TRMT13	95	66.157	Heterocephalus_glaber_female
ENSTGUG00000005253	TRMT13	98	66.157	ENSHGLG00100001618	TRMT13	95	66.157	Heterocephalus_glaber_male
ENSTGUG00000005253	TRMT13	98	49.670	ENSHCOG00000020553	trmt13	97	49.670	Hippocampus_comes
ENSTGUG00000005253	TRMT13	98	57.080	ENSIPUG00000024787	trmt13	98	57.743	Ictalurus_punctatus
ENSTGUG00000005253	TRMT13	98	67.031	ENSSTOG00000013483	TRMT13	95	67.031	Ictidomys_tridecemlineatus
ENSTGUG00000005253	TRMT13	99	64.026	ENSJJAG00000018012	Trmt13	98	64.026	Jaculus_jaculus
ENSTGUG00000005253	TRMT13	66	54.754	ENSKMAG00000007639	trmt13	93	54.754	Kryptolebias_marmoratus
ENSTGUG00000005253	TRMT13	98	51.702	ENSLBEG00000020238	trmt13	99	51.702	Labrus_bergylta
ENSTGUG00000005253	TRMT13	98	63.974	ENSLACG00000013153	TRMT13	99	63.889	Latimeria_chalumnae
ENSTGUG00000005253	TRMT13	98	60.089	ENSLOCG00000000418	trmt13	97	60.310	Lepisosteus_oculatus
ENSTGUG00000005253	TRMT13	79	65.676	ENSLAFG00000002383	TRMT13	100	65.676	Loxodonta_africana
ENSTGUG00000005253	TRMT13	100	65.385	ENSMFAG00000034681	TRMT13	97	65.385	Macaca_fascicularis
ENSTGUG00000005253	TRMT13	100	65.385	ENSMMUG00000004243	TRMT13	97	65.385	Macaca_mulatta
ENSTGUG00000005253	TRMT13	100	65.385	ENSMNEG00000036102	TRMT13	97	65.385	Macaca_nemestrina
ENSTGUG00000005253	TRMT13	100	66.239	ENSMLEG00000034258	TRMT13	97	66.239	Mandrillus_leucophaeus
ENSTGUG00000005253	TRMT13	98	53.595	ENSMAMG00000016597	trmt13	96	53.595	Mastacembelus_armatus
ENSTGUG00000005253	TRMT13	98	55.531	ENSMZEG00005020959	trmt13	99	55.531	Maylandia_zebra
ENSTGUG00000005253	TRMT13	90	81.818	ENSMGAG00000006970	TRMT13	99	81.818	Meleagris_gallopavo
ENSTGUG00000005253	TRMT13	98	65.939	ENSMAUG00000010448	Trmt13	95	65.939	Mesocricetus_auratus
ENSTGUG00000005253	TRMT13	100	66.026	ENSMICG00000005283	TRMT13	97	66.026	Microcebus_murinus
ENSTGUG00000005253	TRMT13	98	66.812	ENSMOCG00000019914	Trmt13	95	66.812	Microtus_ochrogaster
ENSTGUG00000005253	TRMT13	56	52.273	ENSMMOG00000007762	trmt13	89	52.273	Mola_mola
ENSTGUG00000005253	TRMT13	100	65.254	ENSMODG00000003646	TRMT13	97	65.254	Monodelphis_domestica
ENSTGUG00000005253	TRMT13	98	52.980	ENSMALG00000020965	trmt13	96	52.980	Monopterus_albus
ENSTGUG00000005253	TRMT13	99	65.086	MGP_CAROLIEiJ_G0025568	Trmt13	94	72.619	Mus_caroli
ENSTGUG00000005253	TRMT13	98	65.870	ENSMUSG00000033439	Trmt13	94	73.810	Mus_musculus
ENSTGUG00000005253	TRMT13	98	65.217	MGP_PahariEiJ_G0027014	Trmt13	93	73.494	Mus_pahari
ENSTGUG00000005253	TRMT13	98	65.864	MGP_SPRETEiJ_G0026518	Trmt13	94	73.810	Mus_spretus
ENSTGUG00000005253	TRMT13	81	63.852	ENSMPUG00000002078	-	99	63.852	Mustela_putorius_furo
ENSTGUG00000005253	TRMT13	98	62.363	ENSMLUG00000002124	TRMT13	95	62.363	Myotis_lucifugus
ENSTGUG00000005253	TRMT13	98	52.061	ENSNBRG00000006783	trmt13	97	52.061	Neolamprologus_brichardi
ENSTGUG00000005253	TRMT13	100	65.598	ENSNLEG00000035917	TRMT13	97	65.598	Nomascus_leucogenys
ENSTGUG00000005253	TRMT13	51	65.106	ENSMEUG00000013346	-	95	65.106	Notamacropus_eugenii
ENSTGUG00000005253	TRMT13	65	75.000	ENSOPRG00000012048	TRMT13	62	75.000	Ochotona_princeps
ENSTGUG00000005253	TRMT13	98	55.508	ENSONIG00000004574	trmt13	99	55.508	Oreochromis_niloticus
ENSTGUG00000005253	TRMT13	93	67.586	ENSOANG00000012057	TRMT13	100	67.586	Ornithorhynchus_anatinus
ENSTGUG00000005253	TRMT13	98	66.157	ENSOCUG00000023095	TRMT13	96	66.157	Oryctolagus_cuniculus
ENSTGUG00000005253	TRMT13	98	50.753	ENSORLG00000003320	trmt13	98	51.183	Oryzias_latipes
ENSTGUG00000005253	TRMT13	98	50.652	ENSORLG00020005972	trmt13	97	50.655	Oryzias_latipes_hni
ENSTGUG00000005253	TRMT13	98	54.664	ENSORLG00015002270	trmt13	98	54.664	Oryzias_latipes_hsok
ENSTGUG00000005253	TRMT13	98	53.463	ENSOMEG00000006724	trmt13	94	54.329	Oryzias_melastigma
ENSTGUG00000005253	TRMT13	98	66.885	ENSOGAG00000005618	TRMT13	94	66.452	Otolemur_garnettii
ENSTGUG00000005253	TRMT13	100	66.453	ENSOARG00000017983	TRMT13	97	66.453	Ovis_aries
ENSTGUG00000005253	TRMT13	100	65.812	ENSPPAG00000043736	TRMT13	97	65.812	Pan_paniscus
ENSTGUG00000005253	TRMT13	100	66.453	ENSPPRG00000003424	TRMT13	97	66.453	Panthera_pardus
ENSTGUG00000005253	TRMT13	100	66.453	ENSPTIG00000018598	TRMT13	97	66.453	Panthera_tigris_altaica
ENSTGUG00000005253	TRMT13	100	66.026	ENSPTRG00000001001	TRMT13	97	66.026	Pan_troglodytes
ENSTGUG00000005253	TRMT13	100	66.239	ENSPANG00000007598	TRMT13	97	66.239	Papio_anubis
ENSTGUG00000005253	TRMT13	98	56.484	ENSPKIG00000001514	trmt13	97	56.484	Paramormyrops_kingsleyae
ENSTGUG00000005253	TRMT13	89	74.638	ENSPSIG00000012703	TRMT13	99	74.638	Pelodiscus_sinensis
ENSTGUG00000005253	TRMT13	98	53.540	ENSPMGG00000013298	trmt13	93	53.540	Periophthalmus_magnuspinnatus
ENSTGUG00000005253	TRMT13	98	65.721	ENSPEMG00000000275	Trmt13	95	65.721	Peromyscus_maniculatus_bairdii
ENSTGUG00000005253	TRMT13	97	49.682	ENSPMAG00000000823	trmt13	97	49.682	Petromyzon_marinus
ENSTGUG00000005253	TRMT13	100	67.442	ENSPCIG00000007699	TRMT13	98	67.865	Phascolarctos_cinereus
ENSTGUG00000005253	TRMT13	99	52.402	ENSPFOG00000008675	trmt13	96	52.402	Poecilia_formosa
ENSTGUG00000005253	TRMT13	98	52.371	ENSPLAG00000009709	trmt13	99	52.371	Poecilia_latipinna
ENSTGUG00000005253	TRMT13	98	51.293	ENSPMEG00000022954	trmt13	99	51.293	Poecilia_mexicana
ENSTGUG00000005253	TRMT13	87	51.566	ENSPREG00000005645	trmt13	91	55.396	Poecilia_reticulata
ENSTGUG00000005253	TRMT13	99	65.806	ENSPPYG00000001120	TRMT13	97	65.806	Pongo_abelii
ENSTGUG00000005253	TRMT13	99	66.452	ENSPCAG00000002340	TRMT13	97	66.452	Procavia_capensis
ENSTGUG00000005253	TRMT13	100	66.026	ENSPCOG00000017984	TRMT13	97	66.026	Propithecus_coquereli
ENSTGUG00000005253	TRMT13	100	66.880	ENSPVAG00000017430	TRMT13	97	66.880	Pteropus_vampyrus
ENSTGUG00000005253	TRMT13	98	53.996	ENSPNYG00000013690	trmt13	99	53.996	Pundamilia_nyererei
ENSTGUG00000005253	TRMT13	98	58.333	ENSPNAG00000022130	trmt13	97	58.333	Pygocentrus_nattereri
ENSTGUG00000005253	TRMT13	98	65.646	ENSRNOG00000015140	Trmt13	92	65.646	Rattus_norvegicus
ENSTGUG00000005253	TRMT13	100	66.239	ENSRBIG00000037686	TRMT13	97	66.239	Rhinopithecus_bieti
ENSTGUG00000005253	TRMT13	100	66.239	ENSRROG00000044057	TRMT13	97	66.239	Rhinopithecus_roxellana
ENSTGUG00000005253	TRMT13	100	66.026	ENSSBOG00000026541	TRMT13	97	66.026	Saimiri_boliviensis_boliviensis
ENSTGUG00000005253	TRMT13	93	68.506	ENSSHAG00000005213	TRMT13	96	68.506	Sarcophilus_harrisii
ENSTGUG00000005253	TRMT13	98	55.240	ENSSFOG00015017560	trmt13	97	55.973	Scleropages_formosus
ENSTGUG00000005253	TRMT13	99	52.654	ENSSMAG00000014592	trmt13	97	52.654	Scophthalmus_maximus
ENSTGUG00000005253	TRMT13	98	53.291	ENSSDUG00000015508	trmt13	95	53.178	Seriola_dumerili
ENSTGUG00000005253	TRMT13	98	53.165	ENSSLDG00000019060	trmt13	96	53.376	Seriola_lalandi_dorsalis
ENSTGUG00000005253	TRMT13	99	60.000	ENSSARG00000010344	TRMT13	98	60.000	Sorex_araneus
ENSTGUG00000005253	TRMT13	97	71.619	ENSSPUG00000016339	TRMT13	98	71.619	Sphenodon_punctatus
ENSTGUG00000005253	TRMT13	97	52.838	ENSSPAG00000011922	trmt13	97	52.723	Stegastes_partitus
ENSTGUG00000005253	TRMT13	100	66.880	ENSSSCG00000006869	TRMT13	97	66.880	Sus_scrofa
ENSTGUG00000005253	TRMT13	97	51.957	ENSTRUG00000008400	trmt13	97	51.957	Takifugu_rubripes
ENSTGUG00000005253	TRMT13	76	70.253	ENSTBEG00000008911	TRMT13	88	70.253	Tupaia_belangeri
ENSTGUG00000005253	TRMT13	50	75.676	ENSTTRG00000015302	-	59	75.676	Tursiops_truncatus
ENSTGUG00000005253	TRMT13	100	64.530	ENSUAMG00000017251	TRMT13	97	64.530	Ursus_americanus
ENSTGUG00000005253	TRMT13	100	67.308	ENSUMAG00000007901	TRMT13	99	67.824	Ursus_maritimus
ENSTGUG00000005253	TRMT13	92	54.503	ENSVPAG00000001034	TRMT13	100	54.503	Vicugna_pacos
ENSTGUG00000005253	TRMT13	99	66.167	ENSVVUG00000021996	TRMT13	97	66.167	Vulpes_vulpes
ENSTGUG00000005253	TRMT13	98	59.071	ENSXETG00000013204	trmt13	96	59.071	Xenopus_tropicalis
ENSTGUG00000005253	TRMT13	98	51.293	ENSXMAG00000010765	trmt13	99	51.293	Xiphophorus_maculatus