EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000005450 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 2526 bases
Position: chr4A:16362050-16364575
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005608	RNA_pol_L_2	PF13656.6	3.6e-29	1	1
ENSTGUP00000005608	RNA_pol_L	PF01193.24	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005666	POLR1D-201	798	-	ENSTGUP00000005608	96 (aa)	-	H0Z4W3

Gene Model

Click here to download ENSTGUG00000005450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000005450	POLR1D	65	32.258	ENSTGUG00000004510	-	90	32.258
ENSTGUG00000005450	POLR1D	95	34.066	ENSTGUG00000004501	-	91	34.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005450	POLR1D	100	76.042	ENSG00000186184	POLR1D	83	76.042	Homo_sapiens
ENSTGUG00000005450	POLR1D	95	79.121	ENSAPOG00000021882	polr1d	84	80.899	Acanthochromis_polyacanthus
ENSTGUG00000005450	POLR1D	100	78.125	ENSAMEG00000019095	POLR1D	77	78.125	Ailuropoda_melanoleuca
ENSTGUG00000005450	POLR1D	100	74.227	ENSACIG00000013328	polr1d	84	74.227	Amphilophus_citrinellus
ENSTGUG00000005450	POLR1D	100	77.083	ENSAOCG00000018500	polr1d	84	77.083	Amphiprion_ocellaris
ENSTGUG00000005450	POLR1D	97	78.495	ENSAPEG00000009489	polr1d	82	78.495	Amphiprion_percula
ENSTGUG00000005450	POLR1D	100	71.875	ENSATEG00000019322	polr1d	85	72.632	Anabas_testudineus
ENSTGUG00000005450	POLR1D	56	92.593	ENSAPLG00000012757	POLR1D	100	92.593	Anas_platyrhynchos
ENSTGUG00000005450	POLR1D	100	69.792	ENSACAG00000015753	POLR1D	83	69.792	Anolis_carolinensis
ENSTGUG00000005450	POLR1D	100	77.083	ENSANAG00000024486	POLR1D	72	77.083	Aotus_nancymaae
ENSTGUG00000005450	POLR1D	100	75.000	ENSACLG00000023805	polr1d	86	75.000	Astatotilapia_calliptera
ENSTGUG00000005450	POLR1D	100	75.000	ENSAMXG00000036118	polr1d	83	75.000	Astyanax_mexicanus
ENSTGUG00000005450	POLR1D	100	78.125	ENSBTAG00000008642	POLR1D	72	78.125	Bos_taurus
ENSTGUG00000005450	POLR1D	100	78.125	ENSBTAG00000033252	-	72	78.125	Bos_taurus
ENSTGUG00000005450	POLR1D	92	34.091	WBGene00010230	rpac-19	61	34.091	Caenorhabditis_elegans
ENSTGUG00000005450	POLR1D	100	77.083	ENSCJAG00000044669	POLR1D	72	77.083	Callithrix_jacchus
ENSTGUG00000005450	POLR1D	100	78.125	ENSCAFG00000006755	POLR1D	72	78.125	Canis_familiaris
ENSTGUG00000005450	POLR1D	100	77.083	ENSCHIG00000021910	POLR1D	72	77.083	Capra_hircus
ENSTGUG00000005450	POLR1D	100	65.306	ENSTSYG00000034852	-	81	65.306	Carlito_syrichta
ENSTGUG00000005450	POLR1D	100	77.083	ENSTSYG00000026817	-	72	77.083	Carlito_syrichta
ENSTGUG00000005450	POLR1D	68	66.154	ENSCAPG00000006058	-	66	66.154	Cavia_aperea
ENSTGUG00000005450	POLR1D	69	66.667	ENSCPOG00000030450	-	67	66.667	Cavia_porcellus
ENSTGUG00000005450	POLR1D	100	77.083	ENSCCAG00000021349	-	72	77.083	Cebus_capucinus
ENSTGUG00000005450	POLR1D	98	60.638	ENSCCAG00000020191	-	78	60.638	Cebus_capucinus
ENSTGUG00000005450	POLR1D	100	76.042	ENSCATG00000030710	-	72	76.042	Cercocebus_atys
ENSTGUG00000005450	POLR1D	100	64.583	ENSCATG00000022900	-	71	64.583	Cercocebus_atys
ENSTGUG00000005450	POLR1D	100	76.042	ENSCLAG00000017623	POLR1D	77	76.042	Chinchilla_lanigera
ENSTGUG00000005450	POLR1D	90	81.395	ENSCPBG00000004719	POLR1D	85	81.395	Chrysemys_picta_bellii
ENSTGUG00000005450	POLR1D	100	73.958	ENSCANG00000037694	-	72	73.958	Colobus_angolensis_palliatus
ENSTGUG00000005450	POLR1D	100	76.042	ENSCANG00000028632	-	72	76.042	Colobus_angolensis_palliatus
ENSTGUG00000005450	POLR1D	100	77.083	ENSCGRG00001021251	Polr1d	72	77.083	Cricetulus_griseus_chok1gshd
ENSTGUG00000005450	POLR1D	100	77.083	ENSCGRG00000011639	Polr1d	72	77.083	Cricetulus_griseus_crigri
ENSTGUG00000005450	POLR1D	97	75.269	ENSCSEG00000018268	polr1d	82	73.958	Cynoglossus_semilaevis
ENSTGUG00000005450	POLR1D	97	78.495	ENSCVAG00000018527	polr1d	82	78.495	Cyprinodon_variegatus
ENSTGUG00000005450	POLR1D	100	70.833	ENSDARG00000037570	polr1d	86	70.833	Danio_rerio
ENSTGUG00000005450	POLR1D	100	76.042	ENSDNOG00000043676	-	72	76.042	Dasypus_novemcinctus
ENSTGUG00000005450	POLR1D	100	75.000	ENSDNOG00000046247	-	72	75.000	Dasypus_novemcinctus
ENSTGUG00000005450	POLR1D	100	77.083	ENSDORG00000029155	Polr1d	72	77.083	Dipodomys_ordii
ENSTGUG00000005450	POLR1D	89	49.412	FBgn0086447	l(2)37Cg	80	49.412	Drosophila_melanogaster
ENSTGUG00000005450	POLR1D	100	71.875	ENSETEG00000012797	POLR1D	77	71.875	Echinops_telfairi
ENSTGUG00000005450	POLR1D	90	68.605	ENSEBUG00000011748	polr1d	60	68.605	Eptatretus_burgeri
ENSTGUG00000005450	POLR1D	100	77.083	ENSEASG00005022487	POLR1D	74	77.083	Equus_asinus_asinus
ENSTGUG00000005450	POLR1D	99	77.895	ENSEEUG00000013144	POLR1D	77	77.895	Erinaceus_europaeus
ENSTGUG00000005450	POLR1D	99	77.895	ENSELUG00000005105	rpac2	83	77.895	Esox_lucius
ENSTGUG00000005450	POLR1D	100	77.083	ENSFCAG00000030162	POLR1D	72	77.083	Felis_catus
ENSTGUG00000005450	POLR1D	100	96.875	ENSFALG00000011463	POLR1D	95	96.875	Ficedula_albicollis
ENSTGUG00000005450	POLR1D	100	73.958	ENSFDAG00000004463	POLR1D	72	73.958	Fukomys_damarensis
ENSTGUG00000005450	POLR1D	97	76.344	ENSFHEG00000015410	polr1d	81	76.344	Fundulus_heteroclitus
ENSTGUG00000005450	POLR1D	67	87.500	ENSGALG00000007470	POLR1D	63	87.500	Gallus_gallus
ENSTGUG00000005450	POLR1D	97	78.495	ENSGAFG00000001693	polr1d	82	78.495	Gambusia_affinis
ENSTGUG00000005450	POLR1D	100	72.917	ENSGACG00000018585	polr1d	81	72.917	Gasterosteus_aculeatus
ENSTGUG00000005450	POLR1D	100	80.208	ENSGAGG00000008503	POLR1D	84	80.208	Gopherus_agassizii
ENSTGUG00000005450	POLR1D	100	76.042	ENSGGOG00000004235	POLR1D	72	76.042	Gorilla_gorilla
ENSTGUG00000005450	POLR1D	100	75.000	ENSHBUG00000002111	polr1d	84	75.000	Haplochromis_burtoni
ENSTGUG00000005450	POLR1D	100	75.000	ENSHGLG00000003202	POLR1D	72	75.000	Heterocephalus_glaber_female
ENSTGUG00000005450	POLR1D	100	75.000	ENSHGLG00100009393	POLR1D	72	75.000	Heterocephalus_glaber_male
ENSTGUG00000005450	POLR1D	100	70.833	ENSHCOG00000003258	polr1d	84	70.833	Hippocampus_comes
ENSTGUG00000005450	POLR1D	100	76.042	ENSIPUG00000014810	polr1d	83	76.042	Ictalurus_punctatus
ENSTGUG00000005450	POLR1D	100	77.083	ENSSTOG00000013877	POLR1D	72	77.083	Ictidomys_tridecemlineatus
ENSTGUG00000005450	POLR1D	100	56.250	ENSJJAG00000021667	-	56	56.250	Jaculus_jaculus
ENSTGUG00000005450	POLR1D	100	75.000	ENSJJAG00000022671	-	80	75.000	Jaculus_jaculus
ENSTGUG00000005450	POLR1D	100	77.083	ENSKMAG00000015256	polr1d	84	77.083	Kryptolebias_marmoratus
ENSTGUG00000005450	POLR1D	97	76.344	ENSLBEG00000015919	polr1d	82	76.344	Labrus_bergylta
ENSTGUG00000005450	POLR1D	97	73.118	ENSLACG00000006810	POLR1D	78	73.118	Latimeria_chalumnae
ENSTGUG00000005450	POLR1D	61	86.441	ENSLOCG00000014976	polr1d	80	86.441	Lepisosteus_oculatus
ENSTGUG00000005450	POLR1D	100	75.000	ENSLAFG00000032290	POLR1D	72	75.000	Loxodonta_africana
ENSTGUG00000005450	POLR1D	100	76.042	ENSMFAG00000045264	POLR1D	74	76.042	Macaca_fascicularis
ENSTGUG00000005450	POLR1D	100	76.042	ENSMMUG00000020386	POLR1D	83	76.042	Macaca_mulatta
ENSTGUG00000005450	POLR1D	84	71.605	ENSMMUG00000041570	-	73	71.605	Macaca_mulatta
ENSTGUG00000005450	POLR1D	100	76.042	ENSMNEG00000008630	-	72	76.042	Macaca_nemestrina
ENSTGUG00000005450	POLR1D	98	64.894	ENSMNEG00000038120	-	73	64.894	Macaca_nemestrina
ENSTGUG00000005450	POLR1D	100	76.042	ENSMLEG00000041048	-	72	76.042	Mandrillus_leucophaeus
ENSTGUG00000005450	POLR1D	100	64.583	ENSMLEG00000032251	-	71	64.583	Mandrillus_leucophaeus
ENSTGUG00000005450	POLR1D	94	77.778	ENSMAMG00000014834	polr1d	84	77.778	Mastacembelus_armatus
ENSTGUG00000005450	POLR1D	93	80.899	ENSMZEG00005006638	polr1d	79	80.899	Maylandia_zebra
ENSTGUG00000005450	POLR1D	90	96.512	ENSMGAG00000005322	POLR1D	79	96.512	Meleagris_gallopavo
ENSTGUG00000005450	POLR1D	100	77.083	ENSMAUG00000001946	Polr1d	72	77.083	Mesocricetus_auratus
ENSTGUG00000005450	POLR1D	100	76.042	ENSMICG00000016883	-	72	76.042	Microcebus_murinus
ENSTGUG00000005450	POLR1D	100	59.375	ENSMICG00000007349	-	71	59.375	Microcebus_murinus
ENSTGUG00000005450	POLR1D	100	76.042	ENSMOCG00000021288	Polr1d	72	76.042	Microtus_ochrogaster
ENSTGUG00000005450	POLR1D	100	77.083	ENSMMOG00000009605	polr1d	84	77.083	Mola_mola
ENSTGUG00000005450	POLR1D	100	81.250	ENSMODG00000023881	POLR1D	84	81.250	Monodelphis_domestica
ENSTGUG00000005450	POLR1D	100	73.958	ENSMALG00000010652	polr1d	84	73.958	Monopterus_albus
ENSTGUG00000005450	POLR1D	100	75.000	MGP_CAROLIEiJ_G0028034	Polr1d	72	75.000	Mus_caroli
ENSTGUG00000005450	POLR1D	100	75.000	ENSMUSG00000029642	Polr1d	72	75.000	Mus_musculus
ENSTGUG00000005450	POLR1D	100	75.000	MGP_PahariEiJ_G0024600	Polr1d	72	75.000	Mus_pahari
ENSTGUG00000005450	POLR1D	100	73.958	MGP_SPRETEiJ_G0029032	Polr1d	72	73.958	Mus_spretus
ENSTGUG00000005450	POLR1D	100	73.958	ENSMLUG00000004118	-	72	73.958	Myotis_lucifugus
ENSTGUG00000005450	POLR1D	100	78.125	ENSMLUG00000027169	-	72	78.125	Myotis_lucifugus
ENSTGUG00000005450	POLR1D	100	78.125	ENSNGAG00000006014	Polr1d	83	78.125	Nannospalax_galili
ENSTGUG00000005450	POLR1D	100	75.000	ENSNBRG00000020327	polr1d	84	75.000	Neolamprologus_brichardi
ENSTGUG00000005450	POLR1D	100	76.042	ENSNLEG00000000358	POLR1D	72	76.042	Nomascus_leucogenys
ENSTGUG00000005450	POLR1D	97	63.441	ENSODEG00000014801	-	77	63.441	Octodon_degus
ENSTGUG00000005450	POLR1D	99	75.789	ENSODEG00000005294	-	71	75.789	Octodon_degus
ENSTGUG00000005450	POLR1D	99	84.211	ENSOANG00000008708	-	88	84.211	Ornithorhynchus_anatinus
ENSTGUG00000005450	POLR1D	100	77.083	ENSOCUG00000015706	POLR1D	59	77.083	Oryctolagus_cuniculus
ENSTGUG00000005450	POLR1D	100	72.917	ENSORLG00000010257	polr1d	84	72.917	Oryzias_latipes
ENSTGUG00000005450	POLR1D	100	72.917	ENSORLG00020000533	polr1d	65	72.917	Oryzias_latipes_hni
ENSTGUG00000005450	POLR1D	100	73.958	ENSORLG00015013267	polr1d	64	73.958	Oryzias_latipes_hsok
ENSTGUG00000005450	POLR1D	100	73.958	ENSOMEG00000014912	polr1d	64	73.958	Oryzias_melastigma
ENSTGUG00000005450	POLR1D	100	78.125	ENSOGAG00000014601	POLR1D	72	78.125	Otolemur_garnettii
ENSTGUG00000005450	POLR1D	100	77.083	ENSOARG00000017005	POLR1D	74	77.083	Ovis_aries
ENSTGUG00000005450	POLR1D	100	76.042	ENSPPAG00000028138	POLR1D	72	76.042	Pan_paniscus
ENSTGUG00000005450	POLR1D	100	77.083	ENSPPRG00000003381	POLR1D	72	77.083	Panthera_pardus
ENSTGUG00000005450	POLR1D	100	77.083	ENSPTIG00000018137	POLR1D	72	77.083	Panthera_tigris_altaica
ENSTGUG00000005450	POLR1D	100	76.042	ENSPTRG00000005734	POLR1D	72	76.042	Pan_troglodytes
ENSTGUG00000005450	POLR1D	100	63.542	ENSPANG00000035051	-	71	63.542	Papio_anubis
ENSTGUG00000005450	POLR1D	100	76.042	ENSPANG00000020259	-	72	76.042	Papio_anubis
ENSTGUG00000005450	POLR1D	99	77.895	ENSPKIG00000021891	polr1d	64	77.895	Paramormyrops_kingsleyae
ENSTGUG00000005450	POLR1D	100	79.167	ENSPSIG00000011822	POLR1D	74	79.167	Pelodiscus_sinensis
ENSTGUG00000005450	POLR1D	97	72.043	ENSPMGG00000010359	polr1d	81	72.043	Periophthalmus_magnuspinnatus
ENSTGUG00000005450	POLR1D	97	62.366	ENSPMGG00000012998	POLR1D	67	62.366	Periophthalmus_magnuspinnatus
ENSTGUG00000005450	POLR1D	100	76.042	ENSPEMG00000006336	-	74	76.042	Peromyscus_maniculatus_bairdii
ENSTGUG00000005450	POLR1D	96	67.391	ENSPMAG00000004228	polr1d	77	67.391	Petromyzon_marinus
ENSTGUG00000005450	POLR1D	100	81.250	ENSPCIG00000001673	POLR1D	84	81.250	Phascolarctos_cinereus
ENSTGUG00000005450	POLR1D	97	78.495	ENSPFOG00000023343	polr1d	91	79.747	Poecilia_formosa
ENSTGUG00000005450	POLR1D	97	78.495	ENSPLAG00000009675	polr1d	82	78.495	Poecilia_latipinna
ENSTGUG00000005450	POLR1D	97	78.495	ENSPMEG00000004628	polr1d	82	78.495	Poecilia_mexicana
ENSTGUG00000005450	POLR1D	97	78.495	ENSPREG00000022032	polr1d	82	78.495	Poecilia_reticulata
ENSTGUG00000005450	POLR1D	100	73.958	ENSPCOG00000028175	POLR1D	72	73.958	Propithecus_coquereli
ENSTGUG00000005450	POLR1D	100	75.000	ENSPNYG00000000107	polr1d	84	75.000	Pundamilia_nyererei
ENSTGUG00000005450	POLR1D	100	75.000	ENSPNAG00000001512	polr1d	81	75.000	Pygocentrus_nattereri
ENSTGUG00000005450	POLR1D	100	72.917	ENSRBIG00000000336	-	72	72.917	Rhinopithecus_bieti
ENSTGUG00000005450	POLR1D	100	76.042	ENSRBIG00000036378	-	72	76.042	Rhinopithecus_bieti
ENSTGUG00000005450	POLR1D	100	73.958	ENSRROG00000026751	-	72	73.958	Rhinopithecus_roxellana
ENSTGUG00000005450	POLR1D	100	76.042	ENSRROG00000042232	-	72	76.042	Rhinopithecus_roxellana
ENSTGUG00000005450	POLR1D	93	55.056	YNL113W	RPC19	63	55.056	Saccharomyces_cerevisiae
ENSTGUG00000005450	POLR1D	100	77.083	ENSSBOG00000028482	-	72	77.083	Saimiri_boliviensis_boliviensis
ENSTGUG00000005450	POLR1D	89	75.294	ENSSBOG00000030146	-	63	75.294	Saimiri_boliviensis_boliviensis
ENSTGUG00000005450	POLR1D	100	80.208	ENSSHAG00000001190	POLR1D	74	80.208	Sarcophilus_harrisii
ENSTGUG00000005450	POLR1D	96	85.870	ENSSFOG00015011375	polr1d	81	85.870	Scleropages_formosus
ENSTGUG00000005450	POLR1D	100	71.875	ENSSMAG00000011861	polr1d	84	71.875	Scophthalmus_maximus
ENSTGUG00000005450	POLR1D	100	71.875	ENSSDUG00000011930	polr1d	84	71.875	Seriola_dumerili
ENSTGUG00000005450	POLR1D	93	76.404	ENSSLDG00000023871	polr1d	75	76.404	Seriola_lalandi_dorsalis
ENSTGUG00000005450	POLR1D	100	77.083	ENSSARG00000007840	POLR1D	72	77.083	Sorex_araneus
ENSTGUG00000005450	POLR1D	100	77.083	ENSSPUG00000005786	POLR1D	82	77.083	Sphenodon_punctatus
ENSTGUG00000005450	POLR1D	97	76.344	ENSSPAG00000011764	polr1d	82	76.344	Stegastes_partitus
ENSTGUG00000005450	POLR1D	100	75.000	ENSSSCG00000009310	POLR1D	72	75.000	Sus_scrofa
ENSTGUG00000005450	POLR1D	97	76.344	ENSTRUG00000019741	polr1d	82	76.344	Takifugu_rubripes
ENSTGUG00000005450	POLR1D	100	76.042	ENSTBEG00000007006	POLR1D	77	76.042	Tupaia_belangeri
ENSTGUG00000005450	POLR1D	100	78.125	ENSUAMG00000011413	POLR1D	72	78.125	Ursus_americanus
ENSTGUG00000005450	POLR1D	100	78.125	ENSUMAG00000016968	POLR1D	75	78.125	Ursus_maritimus
ENSTGUG00000005450	POLR1D	100	78.125	ENSVVUG00000009216	POLR1D	72	78.125	Vulpes_vulpes
ENSTGUG00000005450	POLR1D	90	82.558	ENSXCOG00000011731	polr1d	66	82.558	Xiphophorus_couchianus
ENSTGUG00000005450	POLR1D	90	82.558	ENSXMAG00000017538	polr1d	66	82.558	Xiphophorus_maculatus