EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000005648 (Gene tree)
Gene ID: 100224283
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 17875 bases
Position: chr19:6680151-6698025
Accession: 100224283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005862	RRM_4	PF10598.9	2.1e-48	1	1
ENSTGUP00000005862	U5_2-snRNA_bdg	PF10597.9	4e-74	1	1
ENSTGUP00000005862	PRO8NT	PF08082.11	4e-87	1	1
ENSTGUP00000005862	U6-snRNA_bdg	PF10596.9	9.8e-90	1	1
ENSTGUP00000005862	PROCN	PF08083.11	5.1e-237	1	1
ENSTGUP00000005862	PRP8_domainIV	PF12134.8	2.3e-130	1	1
ENSTGUP00000005862	PROCT	PF08084.11	4.3e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005921	-	7138	XM_002197291	ENSTGUP00000005862	2335 (aa)	XP_002197327	H0Z5L6

Gene Model

Click here to download ENSTGUG00000005648's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000005648	-	52	99.825	ENSTGUG00000015597	-	95	99.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005648	-	100	99.486	ENSG00000174231	PRPF8	100	99.486	Homo_sapiens
ENSTGUG00000005648	-	100	97.861	ENSAPOG00000010079	prpf8	100	97.861	Acanthochromis_polyacanthus
ENSTGUG00000005648	-	100	99.486	ENSAMEG00000007940	PRPF8	100	99.486	Ailuropoda_melanoleuca
ENSTGUG00000005648	-	100	95.966	ENSACIG00000018280	prpf8	100	95.966	Amphilophus_citrinellus
ENSTGUG00000005648	-	100	97.861	ENSAOCG00000010725	prpf8	100	97.861	Amphiprion_ocellaris
ENSTGUG00000005648	-	100	97.861	ENSAPEG00000014397	prpf8	100	97.861	Amphiprion_percula
ENSTGUG00000005648	-	100	97.263	ENSATEG00000010062	prpf8	100	97.263	Anabas_testudineus
ENSTGUG00000005648	-	96	99.867	ENSAPLG00000010357	PRPF8	100	99.867	Anas_platyrhynchos
ENSTGUG00000005648	-	82	97.728	ENSACAG00000014784	PRPF8	99	97.728	Anolis_carolinensis
ENSTGUG00000005648	-	100	99.486	ENSANAG00000032629	PRPF8	100	99.486	Aotus_nancymaae
ENSTGUG00000005648	-	100	97.362	ENSACLG00000020858	prpf8	100	97.362	Astatotilapia_calliptera
ENSTGUG00000005648	-	100	97.901	ENSAMXG00000020291	prpf8	100	97.901	Astyanax_mexicanus
ENSTGUG00000005648	-	100	99.486	ENSBTAG00000011488	PRPF8	100	99.486	Bos_taurus
ENSTGUG00000005648	-	99	86.535	WBGene00004187	prp-8	99	86.621	Caenorhabditis_elegans
ENSTGUG00000005648	-	100	99.486	ENSCJAG00000001911	PRPF8	100	99.486	Callithrix_jacchus
ENSTGUG00000005648	-	100	99.486	ENSCAFG00000019221	PRPF8	100	99.486	Canis_familiaris
ENSTGUG00000005648	-	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSTGUG00000005648	-	100	99.486	ENSCHIG00000017499	PRPF8	100	99.486	Capra_hircus
ENSTGUG00000005648	-	100	99.486	ENSTSYG00000014120	PRPF8	100	99.486	Carlito_syrichta
ENSTGUG00000005648	-	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSTGUG00000005648	-	100	99.486	ENSCPOG00000010379	PRPF8	100	99.486	Cavia_porcellus
ENSTGUG00000005648	-	100	99.486	ENSCCAG00000031983	-	100	99.486	Cebus_capucinus
ENSTGUG00000005648	-	100	99.486	ENSCATG00000038595	PRPF8	100	99.486	Cercocebus_atys
ENSTGUG00000005648	-	100	99.486	ENSCLAG00000004388	PRPF8	100	99.486	Chinchilla_lanigera
ENSTGUG00000005648	-	100	99.486	ENSCSAG00000013929	PRPF8	100	99.486	Chlorocebus_sabaeus
ENSTGUG00000005648	-	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSTGUG00000005648	-	100	99.829	ENSCPBG00000020409	PRPF8	100	99.829	Chrysemys_picta_bellii
ENSTGUG00000005648	-	99	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSTGUG00000005648	-	100	99.486	ENSCANG00000043088	PRPF8	100	99.486	Colobus_angolensis_palliatus
ENSTGUG00000005648	-	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSTGUG00000005648	-	100	97.777	ENSCSEG00000007905	prpf8	100	97.777	Cynoglossus_semilaevis
ENSTGUG00000005648	-	100	97.652	ENSDARG00000026180	prpf8	100	97.652	Danio_rerio
ENSTGUG00000005648	-	93	99.494	ENSDNOG00000018471	PRPF8	99	99.494	Dasypus_novemcinctus
ENSTGUG00000005648	-	84	98.722	ENSDORG00000006185	Prpf8	96	98.722	Dipodomys_ordii
ENSTGUG00000005648	-	99	91.545	FBgn0033688	Prp8	97	91.545	Drosophila_melanogaster
ENSTGUG00000005648	-	100	94.047	ENSETEG00000017592	PRPF8	100	94.047	Echinops_telfairi
ENSTGUG00000005648	-	99	93.763	ENSEBUG00000006548	prpf8	99	93.763	Eptatretus_burgeri
ENSTGUG00000005648	-	100	99.486	ENSEASG00005009514	PRPF8	100	99.486	Equus_asinus_asinus
ENSTGUG00000005648	-	97	99.692	ENSECAG00000021318	PRPF8	100	99.692	Equus_caballus
ENSTGUG00000005648	-	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSTGUG00000005648	-	98	96.591	ENSELUG00000007120	prpf8	99	96.591	Esox_lucius
ENSTGUG00000005648	-	100	99.486	ENSFCAG00000006297	PRPF8	100	99.486	Felis_catus
ENSTGUG00000005648	-	100	100.000	ENSFALG00000006628	PRPF8	100	100.000	Ficedula_albicollis
ENSTGUG00000005648	-	100	99.486	ENSFDAG00000004711	PRPF8	100	99.486	Fukomys_damarensis
ENSTGUG00000005648	-	100	97.566	ENSFHEG00000021084	prpf8	100	97.566	Fundulus_heteroclitus
ENSTGUG00000005648	-	100	95.516	ENSGMOG00000002028	prpf8	99	95.516	Gadus_morhua
ENSTGUG00000005648	-	100	99.914	ENSGALG00000002943	PRPF8	100	99.914	Gallus_gallus
ENSTGUG00000005648	-	99	97.851	ENSGAFG00000010337	prpf8	99	97.851	Gambusia_affinis
ENSTGUG00000005648	-	100	97.730	ENSGACG00000008504	prpf8	100	97.730	Gasterosteus_aculeatus
ENSTGUG00000005648	-	100	99.743	ENSGAGG00000008350	PRPF8	100	99.743	Gopherus_agassizii
ENSTGUG00000005648	-	100	99.486	ENSGGOG00000005516	PRPF8	100	99.486	Gorilla_gorilla
ENSTGUG00000005648	-	100	97.773	ENSHBUG00000016192	prpf8	100	97.773	Haplochromis_burtoni
ENSTGUG00000005648	-	100	99.486	ENSHGLG00000012029	PRPF8	100	99.486	Heterocephalus_glaber_female
ENSTGUG00000005648	-	100	99.486	ENSHGLG00100016494	PRPF8	100	99.486	Heterocephalus_glaber_male
ENSTGUG00000005648	-	100	97.649	ENSHCOG00000016414	prpf8	100	97.649	Hippocampus_comes
ENSTGUG00000005648	-	100	97.733	ENSIPUG00000023230	prpf8	100	97.733	Ictalurus_punctatus
ENSTGUG00000005648	-	100	99.486	ENSSTOG00000005128	PRPF8	100	99.486	Ictidomys_tridecemlineatus
ENSTGUG00000005648	-	100	97.302	ENSJJAG00000021159	Prpf8	100	97.302	Jaculus_jaculus
ENSTGUG00000005648	-	99	97.979	ENSKMAG00000016118	prpf8	99	97.979	Kryptolebias_marmoratus
ENSTGUG00000005648	-	100	97.605	ENSLBEG00000026903	prpf8	100	97.605	Labrus_bergylta
ENSTGUG00000005648	-	95	96.117	ENSLACG00000010479	PRPF8	99	98.599	Latimeria_chalumnae
ENSTGUG00000005648	-	99	97.988	ENSLOCG00000005409	prpf8	99	97.988	Lepisosteus_oculatus
ENSTGUG00000005648	-	100	99.486	ENSLAFG00000015445	PRPF8	100	99.486	Loxodonta_africana
ENSTGUG00000005648	-	100	99.486	ENSMFAG00000039995	PRPF8	100	99.486	Macaca_fascicularis
ENSTGUG00000005648	-	100	99.486	ENSMMUG00000004820	PRPF8	100	99.486	Macaca_mulatta
ENSTGUG00000005648	-	100	99.486	ENSMNEG00000035713	PRPF8	100	99.486	Macaca_nemestrina
ENSTGUG00000005648	-	100	99.486	ENSMLEG00000037937	PRPF8	100	99.486	Mandrillus_leucophaeus
ENSTGUG00000005648	-	100	97.861	ENSMAMG00000008919	prpf8	100	97.861	Mastacembelus_armatus
ENSTGUG00000005648	-	100	97.362	ENSMZEG00005015073	prpf8	100	97.362	Maylandia_zebra
ENSTGUG00000005648	-	100	99.914	ENSMGAG00000004769	PRPF8	100	99.914	Meleagris_gallopavo
ENSTGUG00000005648	-	100	99.443	ENSMICG00000010320	PRPF8	100	99.443	Microcebus_murinus
ENSTGUG00000005648	-	100	99.443	ENSMOCG00000016838	Prpf8	100	99.443	Microtus_ochrogaster
ENSTGUG00000005648	-	100	97.348	ENSMMOG00000011887	prpf8	100	97.348	Mola_mola
ENSTGUG00000005648	-	100	99.486	ENSMODG00000010480	PRPF8	100	99.486	Monodelphis_domestica
ENSTGUG00000005648	-	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSTGUG00000005648	-	100	99.400	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.400	Mus_caroli
ENSTGUG00000005648	-	100	99.400	ENSMUSG00000020850	Prpf8	100	99.400	Mus_musculus
ENSTGUG00000005648	-	100	99.358	MGP_PahariEiJ_G0017877	Prpf8	100	99.358	Mus_pahari
ENSTGUG00000005648	-	100	99.400	MGP_SPRETEiJ_G0017583	Prpf8	100	99.400	Mus_spretus
ENSTGUG00000005648	-	100	99.486	ENSMPUG00000013227	PRPF8	100	99.486	Mustela_putorius_furo
ENSTGUG00000005648	-	100	99.273	ENSMLUG00000002666	PRPF8	100	99.273	Myotis_lucifugus
ENSTGUG00000005648	-	100	97.687	ENSNGAG00000005305	Prpf8	100	97.687	Nannospalax_galili
ENSTGUG00000005648	-	100	97.404	ENSNBRG00000013127	prpf8	100	97.404	Neolamprologus_brichardi
ENSTGUG00000005648	-	97	97.508	ENSNLEG00000000897	PRPF8	98	97.508	Nomascus_leucogenys
ENSTGUG00000005648	-	99	97.870	ENSMEUG00000015999	PRPF8	100	97.870	Notamacropus_eugenii
ENSTGUG00000005648	-	100	97.944	ENSOPRG00000003102	PRPF8	100	97.944	Ochotona_princeps
ENSTGUG00000005648	-	100	99.486	ENSODEG00000008468	PRPF8	100	99.486	Octodon_degus
ENSTGUG00000005648	-	100	97.447	ENSONIG00000008153	prpf8	100	97.447	Oreochromis_niloticus
ENSTGUG00000005648	-	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSTGUG00000005648	-	100	99.486	ENSOCUG00000000081	PRPF8	100	99.486	Oryctolagus_cuniculus
ENSTGUG00000005648	-	100	97.026	ENSORLG00000008036	prpf8	100	97.026	Oryzias_latipes
ENSTGUG00000005648	-	100	96.985	ENSORLG00020021070	prpf8	100	96.985	Oryzias_latipes_hni
ENSTGUG00000005648	-	100	97.026	ENSORLG00015002340	prpf8	100	97.026	Oryzias_latipes_hsok
ENSTGUG00000005648	-	100	95.582	ENSOMEG00000016866	prpf8	100	95.582	Oryzias_melastigma
ENSTGUG00000005648	-	100	99.358	ENSOARG00000013312	PRPF8	100	99.358	Ovis_aries
ENSTGUG00000005648	-	100	99.486	ENSPPAG00000042753	PRPF8	100	99.486	Pan_paniscus
ENSTGUG00000005648	-	100	99.486	ENSPPRG00000008746	PRPF8	100	99.486	Panthera_pardus
ENSTGUG00000005648	-	100	99.400	ENSPTIG00000019200	PRPF8	100	99.400	Panthera_tigris_altaica
ENSTGUG00000005648	-	100	99.486	ENSPTRG00000039576	PRPF8	100	99.486	Pan_troglodytes
ENSTGUG00000005648	-	99	99.696	ENSPANG00000024607	PRPF8	98	99.696	Papio_anubis
ENSTGUG00000005648	-	100	97.657	ENSPKIG00000011201	prpf8	100	97.657	Paramormyrops_kingsleyae
ENSTGUG00000005648	-	100	99.786	ENSPSIG00000013393	PRPF8	100	99.786	Pelodiscus_sinensis
ENSTGUG00000005648	-	100	99.443	ENSPEMG00000021699	Prpf8	100	99.443	Peromyscus_maniculatus_bairdii
ENSTGUG00000005648	-	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSTGUG00000005648	-	100	99.486	ENSPCIG00000022603	PRPF8	100	99.688	Phascolarctos_cinereus
ENSTGUG00000005648	-	100	97.031	ENSPFOG00000007005	prpf8	100	97.031	Poecilia_formosa
ENSTGUG00000005648	-	100	96.488	ENSPLAG00000020777	prpf8	100	96.488	Poecilia_latipinna
ENSTGUG00000005648	-	100	97.031	ENSPMEG00000004051	prpf8	100	97.031	Poecilia_mexicana
ENSTGUG00000005648	-	100	97.901	ENSPREG00000021902	prpf8	100	97.901	Poecilia_reticulata
ENSTGUG00000005648	-	100	99.486	ENSPPYG00000007777	PRPF8	100	99.486	Pongo_abelii
ENSTGUG00000005648	-	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSTGUG00000005648	-	100	99.443	ENSPCOG00000015182	PRPF8	100	99.443	Propithecus_coquereli
ENSTGUG00000005648	-	93	99.446	ENSPVAG00000002134	PRPF8	93	99.446	Pteropus_vampyrus
ENSTGUG00000005648	-	100	97.773	ENSPNYG00000016356	prpf8	100	97.773	Pundamilia_nyererei
ENSTGUG00000005648	-	100	97.819	ENSPNAG00000009247	prpf8	100	97.819	Pygocentrus_nattereri
ENSTGUG00000005648	-	100	99.400	ENSRNOG00000003495	Prpf8	100	99.400	Rattus_norvegicus
ENSTGUG00000005648	-	100	99.486	ENSRBIG00000031219	PRPF8	100	99.486	Rhinopithecus_bieti
ENSTGUG00000005648	-	100	99.486	ENSRROG00000038014	PRPF8	100	99.486	Rhinopithecus_roxellana
ENSTGUG00000005648	-	99	62.559	YHR165C	PRP8	95	62.602	Saccharomyces_cerevisiae
ENSTGUG00000005648	-	100	99.486	ENSSBOG00000029717	PRPF8	100	99.486	Saimiri_boliviensis_boliviensis
ENSTGUG00000005648	-	100	99.443	ENSSHAG00000006167	PRPF8	100	99.443	Sarcophilus_harrisii
ENSTGUG00000005648	-	100	97.609	ENSSFOG00015013905	prpf8	100	97.609	Scleropages_formosus
ENSTGUG00000005648	-	100	97.648	ENSSMAG00000017736	prpf8	100	97.648	Scophthalmus_maximus
ENSTGUG00000005648	-	100	97.861	ENSSDUG00000003029	prpf8	100	97.861	Seriola_dumerili
ENSTGUG00000005648	-	68	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSTGUG00000005648	-	87	98.033	ENSSARG00000002892	PRPF8	87	98.033	Sorex_araneus
ENSTGUG00000005648	-	100	99.486	ENSSPUG00000007463	PRPF8	100	99.486	Sphenodon_punctatus
ENSTGUG00000005648	-	100	97.263	ENSSPAG00000015639	prpf8	100	97.263	Stegastes_partitus
ENSTGUG00000005648	-	100	99.486	ENSSSCG00000017817	PRPF8	100	99.486	Sus_scrofa
ENSTGUG00000005648	-	100	97.648	ENSTRUG00000015906	prpf8	100	97.648	Takifugu_rubripes
ENSTGUG00000005648	-	95	98.865	ENSTNIG00000003460	prpf8	99	98.865	Tetraodon_nigroviridis
ENSTGUG00000005648	-	93	99.796	ENSTBEG00000006431	PRPF8	93	99.796	Tupaia_belangeri
ENSTGUG00000005648	-	100	98.887	ENSTTRG00000006869	PRPF8	100	98.887	Tursiops_truncatus
ENSTGUG00000005648	-	54	98.579	ENSUAMG00000015644	-	96	98.579	Ursus_americanus
ENSTGUG00000005648	-	100	99.229	ENSUMAG00000009385	PRPF8	100	99.229	Ursus_maritimus
ENSTGUG00000005648	-	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSTGUG00000005648	-	100	99.486	ENSVVUG00000021695	PRPF8	99	99.486	Vulpes_vulpes
ENSTGUG00000005648	-	100	98.673	ENSXETG00000022259	prpf8	100	98.673	Xenopus_tropicalis
ENSTGUG00000005648	-	100	97.523	ENSXCOG00000012775	prpf8	100	97.523	Xiphophorus_couchianus
ENSTGUG00000005648	-	100	97.566	ENSXMAG00000008505	prpf8	100	97.566	Xiphophorus_maculatus