EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005684 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 2542 bases
Position: chr20:7287104-7289645
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000005846	LSM	PF01423.22	3.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000005905	SNRPB-201	1158	-	ENSTGUP00000005846	239 (aa)	-	H0Z5K0

Gene Model

Click here to download ENSTGUG00000005684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005684	SNRPB	59	96.429	ENSG00000125835	SNRPB	73	98.039	Homo_sapiens
ENSTGUG00000005684	SNRPB	59	97.143	ENSAPOG00000019606	snrpb	57	83.529	Acanthochromis_polyacanthus
ENSTGUG00000005684	SNRPB	59	96.429	ENSAMEG00000011353	SNRPB	73	79.661	Ailuropoda_melanoleuca
ENSTGUG00000005684	SNRPB	56	97.037	ENSACIG00000014480	snrpb	72	83.030	Amphilophus_citrinellus
ENSTGUG00000005684	SNRPB	59	97.143	ENSAOCG00000006876	snrpb	70	83.529	Amphiprion_ocellaris
ENSTGUG00000005684	SNRPB	59	97.143	ENSAPEG00000021585	snrpb	61	97.059	Amphiprion_percula
ENSTGUG00000005684	SNRPB	59	97.143	ENSATEG00000009836	snrpb	58	97.143	Anabas_testudineus
ENSTGUG00000005684	SNRPB	56	99.248	ENSACAG00000002053	SNRPB	75	79.429	Anolis_carolinensis
ENSTGUG00000005684	SNRPB	59	96.429	ENSANAG00000024443	-	77	79.661	Aotus_nancymaae
ENSTGUG00000005684	SNRPB	59	89.286	ENSANAG00000036271	-	56	89.286	Aotus_nancymaae
ENSTGUG00000005684	SNRPB	59	97.143	ENSACLG00000014707	snrpb	70	83.529	Astatotilapia_calliptera
ENSTGUG00000005684	SNRPB	59	96.429	ENSAMXG00000029434	snrpb	74	80.226	Astyanax_mexicanus
ENSTGUG00000005684	SNRPB	59	96.429	ENSBTAG00000001038	SNRPB	77	79.661	Bos_taurus
ENSTGUG00000005684	SNRPB	89	76.526	ENSCJAG00000023097	-	78	75.532	Callithrix_jacchus
ENSTGUG00000005684	SNRPB	59	96.429	ENSCJAG00000020971	-	77	79.661	Callithrix_jacchus
ENSTGUG00000005684	SNRPB	59	84.507	ENSCAFG00000031109	-	59	83.099	Canis_familiaris
ENSTGUG00000005684	SNRPB	59	96.429	ENSCAFG00000006693	-	77	79.661	Canis_familiaris
ENSTGUG00000005684	SNRPB	59	96.429	ENSCAFG00020016981	-	74	79.661	Canis_lupus_dingo
ENSTGUG00000005684	SNRPB	59	96.429	ENSCHIG00000025449	-	77	79.661	Capra_hircus
ENSTGUG00000005684	SNRPB	59	77.143	ENSTSYG00000032303	-	51	77.143	Carlito_syrichta
ENSTGUG00000005684	SNRPB	59	96.429	ENSTSYG00000014498	-	77	79.661	Carlito_syrichta
ENSTGUG00000005684	SNRPB	59	96.429	ENSCAPG00000012669	SNRPB	77	79.661	Cavia_aperea
ENSTGUG00000005684	SNRPB	59	96.429	ENSCPOG00000039408	SNRPB	77	79.661	Cavia_porcellus
ENSTGUG00000005684	SNRPB	53	84.252	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSTGUG00000005684	SNRPB	59	96.429	ENSCCAG00000026002	SNRPB	77	79.661	Cebus_capucinus
ENSTGUG00000005684	SNRPB	59	96.429	ENSCATG00000030230	SNRPB	77	79.661	Cercocebus_atys
ENSTGUG00000005684	SNRPB	59	96.429	ENSCLAG00000012442	SNRPB	75	79.661	Chinchilla_lanigera
ENSTGUG00000005684	SNRPB	59	96.429	ENSCSAG00000010840	SNRPB	77	79.661	Chlorocebus_sabaeus
ENSTGUG00000005684	SNRPB	59	99.286	ENSCPBG00000026801	SNRPB	77	81.921	Chrysemys_picta_bellii
ENSTGUG00000005684	SNRPB	59	96.429	ENSCANG00000019461	SNRPB	63	96.154	Colobus_angolensis_palliatus
ENSTGUG00000005684	SNRPB	59	96.429	ENSCGRG00001023046	Snrpb	77	79.661	Cricetulus_griseus_chok1gshd
ENSTGUG00000005684	SNRPB	57	96.324	ENSCGRG00000010423	Snrpb	76	78.824	Cricetulus_griseus_crigri
ENSTGUG00000005684	SNRPB	59	97.143	ENSCSEG00000020328	snrpb	72	82.081	Cynoglossus_semilaevis
ENSTGUG00000005684	SNRPB	59	97.143	ENSDARG00000011125	snrpb	73	80.791	Danio_rerio
ENSTGUG00000005684	SNRPB	59	90.000	ENSDNOG00000007896	-	52	96.063	Dasypus_novemcinctus
ENSTGUG00000005684	SNRPB	59	96.429	ENSDNOG00000015545	-	74	79.661	Dasypus_novemcinctus
ENSTGUG00000005684	SNRPB	56	96.296	ENSDORG00000029558	Snrpb	75	79.070	Dipodomys_ordii
ENSTGUG00000005684	SNRPB	58	71.223	FBgn0262601	SmB	69	71.223	Drosophila_melanogaster
ENSTGUG00000005684	SNRPB	94	65.333	ENSETEG00000006830	SNRPB	99	65.333	Echinops_telfairi
ENSTGUG00000005684	SNRPB	59	89.286	ENSEBUG00000007467	SNRPB	59	89.286	Eptatretus_burgeri
ENSTGUG00000005684	SNRPB	59	95.714	ENSEASG00005012991	SNRPB	77	79.096	Equus_asinus_asinus
ENSTGUG00000005684	SNRPB	59	96.429	ENSECAG00000011944	SNRPB	77	79.661	Equus_caballus
ENSTGUG00000005684	SNRPB	59	96.429	ENSEEUG00000015568	SNRPB	62	79.661	Erinaceus_europaeus
ENSTGUG00000005684	SNRPB	59	97.143	ENSELUG00000014564	snrpb	72	83.636	Esox_lucius
ENSTGUG00000005684	SNRPB	59	96.429	ENSFCAG00000034090	-	77	79.661	Felis_catus
ENSTGUG00000005684	SNRPB	56	99.248	ENSFALG00000004866	SNRPB	75	79.429	Ficedula_albicollis
ENSTGUG00000005684	SNRPB	59	96.429	ENSFDAG00000009937	SNRPB	77	79.661	Fukomys_damarensis
ENSTGUG00000005684	SNRPB	59	99.286	ENSGALG00000035421	SNRPN	74	81.921	Gallus_gallus
ENSTGUG00000005684	SNRPB	59	96.429	ENSGAFG00000019558	snrpb	74	82.941	Gambusia_affinis
ENSTGUG00000005684	SNRPB	59	97.143	ENSGACG00000003262	snrpb	71	83.529	Gasterosteus_aculeatus
ENSTGUG00000005684	SNRPB	59	99.286	ENSGAGG00000001308	SNRPB	74	81.921	Gopherus_agassizii
ENSTGUG00000005684	SNRPB	59	96.429	ENSGGOG00000016138	SNRPB	77	79.661	Gorilla_gorilla
ENSTGUG00000005684	SNRPB	59	97.143	ENSHBUG00000008369	snrpb	70	83.529	Haplochromis_burtoni
ENSTGUG00000005684	SNRPB	59	96.429	ENSHGLG00000016241	-	77	79.661	Heterocephalus_glaber_female
ENSTGUG00000005684	SNRPB	58	87.050	ENSHGLG00000016505	-	67	87.050	Heterocephalus_glaber_female
ENSTGUG00000005684	SNRPB	58	87.050	ENSHGLG00100004178	-	67	87.050	Heterocephalus_glaber_male
ENSTGUG00000005684	SNRPB	59	96.429	ENSHGLG00100012877	-	77	79.661	Heterocephalus_glaber_male
ENSTGUG00000005684	SNRPB	59	97.143	ENSHCOG00000014888	snrpb	71	83.529	Hippocampus_comes
ENSTGUG00000005684	SNRPB	59	97.143	ENSIPUG00000024569	SNRPB	74	80.791	Ictalurus_punctatus
ENSTGUG00000005684	SNRPB	92	79.091	ENSSTOG00000033664	-	92	79.091	Ictidomys_tridecemlineatus
ENSTGUG00000005684	SNRPB	59	93.571	ENSSTOG00000027821	-	63	94.245	Ictidomys_tridecemlineatus
ENSTGUG00000005684	SNRPB	59	96.429	ENSJJAG00000024170	Snrpb	77	79.661	Jaculus_jaculus
ENSTGUG00000005684	SNRPB	59	97.857	ENSKMAG00000014494	snrpb	69	84.118	Kryptolebias_marmoratus
ENSTGUG00000005684	SNRPB	59	97.143	ENSLBEG00000005678	snrpb	71	83.529	Labrus_bergylta
ENSTGUG00000005684	SNRPB	59	97.857	ENSLOCG00000002687	snrpb	74	81.356	Lepisosteus_oculatus
ENSTGUG00000005684	SNRPB	59	90.714	ENSLAFG00000017588	SNRPB	76	75.141	Loxodonta_africana
ENSTGUG00000005684	SNRPB	59	96.429	ENSMFAG00000038756	SNRPB	77	79.661	Macaca_fascicularis
ENSTGUG00000005684	SNRPB	59	96.429	ENSMMUG00000010050	SNRPB	77	79.661	Macaca_mulatta
ENSTGUG00000005684	SNRPB	59	96.429	ENSMNEG00000027954	SNRPB	77	79.661	Macaca_nemestrina
ENSTGUG00000005684	SNRPB	59	96.429	ENSMLEG00000022346	SNRPB	77	79.661	Mandrillus_leucophaeus
ENSTGUG00000005684	SNRPB	59	97.143	ENSMAMG00000009294	snrpb	68	83.529	Mastacembelus_armatus
ENSTGUG00000005684	SNRPB	59	97.143	ENSMZEG00005011856	snrpb	70	83.529	Maylandia_zebra
ENSTGUG00000005684	SNRPB	59	96.429	ENSMICG00000016519	SNRPB	77	79.661	Microcebus_murinus
ENSTGUG00000005684	SNRPB	59	85.714	ENSMICG00000015983	-	81	71.186	Microcebus_murinus
ENSTGUG00000005684	SNRPB	59	95.714	ENSMOCG00000002892	-	77	79.096	Microtus_ochrogaster
ENSTGUG00000005684	SNRPB	58	78.986	ENSMOCG00000021362	-	58	72.464	Microtus_ochrogaster
ENSTGUG00000005684	SNRPB	59	97.143	ENSMMOG00000013226	snrpb	72	83.529	Mola_mola
ENSTGUG00000005684	SNRPB	59	96.429	ENSMALG00000020839	snrpb	57	82.941	Monopterus_albus
ENSTGUG00000005684	SNRPB	59	96.429	MGP_CAROLIEiJ_G0024293	Snrpb	73	98.039	Mus_caroli
ENSTGUG00000005684	SNRPB	59	96.429	ENSMUSG00000027404	Snrpb	73	98.039	Mus_musculus
ENSTGUG00000005684	SNRPB	59	96.429	MGP_PahariEiJ_G0025738	Snrpb	73	98.039	Mus_pahari
ENSTGUG00000005684	SNRPB	59	96.429	MGP_SPRETEiJ_G0025213	Snrpb	72	98.039	Mus_spretus
ENSTGUG00000005684	SNRPB	59	96.429	ENSMPUG00000009283	SNRPB	77	79.661	Mustela_putorius_furo
ENSTGUG00000005684	SNRPB	59	92.857	ENSMLUG00000016951	SNRPB	73	76.836	Myotis_lucifugus
ENSTGUG00000005684	SNRPB	59	96.429	ENSNGAG00000012051	Snrpb	77	79.661	Nannospalax_galili
ENSTGUG00000005684	SNRPB	57	95.620	ENSNBRG00000006353	snrpb	63	82.036	Neolamprologus_brichardi
ENSTGUG00000005684	SNRPB	59	96.429	ENSNLEG00000029067	SNRPB	75	79.661	Nomascus_leucogenys
ENSTGUG00000005684	SNRPB	59	96.429	ENSMEUG00000015625	SNRPB	79	79.661	Notamacropus_eugenii
ENSTGUG00000005684	SNRPB	59	96.429	ENSODEG00000004305	-	77	79.661	Octodon_degus
ENSTGUG00000005684	SNRPB	59	90.000	ENSODEG00000016060	-	74	75.706	Octodon_degus
ENSTGUG00000005684	SNRPB	59	97.143	ENSONIG00000000248	snrpb	70	83.529	Oreochromis_niloticus
ENSTGUG00000005684	SNRPB	59	93.571	ENSOCUG00000028215	-	74	77.401	Oryctolagus_cuniculus
ENSTGUG00000005684	SNRPB	59	96.429	ENSOCUG00000014042	-	74	79.661	Oryctolagus_cuniculus
ENSTGUG00000005684	SNRPB	88	52.423	ENSOCUG00000026813	-	72	57.988	Oryctolagus_cuniculus
ENSTGUG00000005684	SNRPB	90	75.701	ENSOCUG00000021456	-	71	78.824	Oryctolagus_cuniculus
ENSTGUG00000005684	SNRPB	59	92.143	ENSOCUG00000022423	-	90	77.401	Oryctolagus_cuniculus
ENSTGUG00000005684	SNRPB	59	97.143	ENSORLG00000021862	snrpb	70	83.529	Oryzias_latipes
ENSTGUG00000005684	SNRPB	59	96.429	ENSOGAG00000016149	SNRPB	74	79.661	Otolemur_garnettii
ENSTGUG00000005684	SNRPB	59	96.429	ENSOARG00000006740	SNRPB	77	79.661	Ovis_aries
ENSTGUG00000005684	SNRPB	59	96.429	ENSPPAG00000036314	SNRPB	77	79.661	Pan_paniscus
ENSTGUG00000005684	SNRPB	59	96.429	ENSPPRG00000003233	-	77	79.661	Panthera_pardus
ENSTGUG00000005684	SNRPB	59	96.429	ENSPTIG00000007468	SNRPB	77	79.661	Panthera_tigris_altaica
ENSTGUG00000005684	SNRPB	59	96.429	ENSPTRG00000013176	SNRPB	77	79.661	Pan_troglodytes
ENSTGUG00000005684	SNRPB	59	96.429	ENSPANG00000020362	SNRPB	74	79.661	Papio_anubis
ENSTGUG00000005684	SNRPB	59	97.143	ENSPKIG00000002865	snrpb	59	97.143	Paramormyrops_kingsleyae
ENSTGUG00000005684	SNRPB	59	99.286	ENSPSIG00000014125	SNRPB	73	81.921	Pelodiscus_sinensis
ENSTGUG00000005684	SNRPB	57	94.853	ENSPMGG00000016349	snrpb	58	94.853	Periophthalmus_magnuspinnatus
ENSTGUG00000005684	SNRPB	59	96.429	ENSPEMG00000007948	Snrpb	77	79.661	Peromyscus_maniculatus_bairdii
ENSTGUG00000005684	SNRPB	59	95.714	ENSPCIG00000004694	SNRPB	73	79.096	Phascolarctos_cinereus
ENSTGUG00000005684	SNRPB	59	97.143	ENSPFOG00000011802	snrpb	59	97.143	Poecilia_formosa
ENSTGUG00000005684	SNRPB	72	82.081	ENSPLAG00000014130	snrpb	74	82.081	Poecilia_latipinna
ENSTGUG00000005684	SNRPB	56	97.037	ENSPREG00000015515	snrpb	71	85.987	Poecilia_reticulata
ENSTGUG00000005684	SNRPB	59	96.429	ENSPPYG00000010841	SNRPB	77	79.661	Pongo_abelii
ENSTGUG00000005684	SNRPB	59	96.429	ENSPCOG00000013686	SNRPB	77	79.661	Propithecus_coquereli
ENSTGUG00000005684	SNRPB	59	95.000	ENSPVAG00000017013	SNRPB	62	78.531	Pteropus_vampyrus
ENSTGUG00000005684	SNRPB	59	97.143	ENSPNYG00000014788	snrpb	70	83.529	Pundamilia_nyererei
ENSTGUG00000005684	SNRPB	59	97.143	ENSPNAG00000016126	snrpb	74	80.791	Pygocentrus_nattereri
ENSTGUG00000005684	SNRPB	59	96.429	ENSRNOG00000006961	Snrpb	72	98.039	Rattus_norvegicus
ENSTGUG00000005684	SNRPB	59	96.429	ENSRBIG00000040505	SNRPB	74	82.353	Rhinopithecus_bieti
ENSTGUG00000005684	SNRPB	59	96.429	ENSRROG00000036094	SNRPB	77	79.661	Rhinopithecus_roxellana
ENSTGUG00000005684	SNRPB	59	96.429	ENSSBOG00000027310	SNRPB	77	79.661	Saimiri_boliviensis_boliviensis
ENSTGUG00000005684	SNRPB	59	97.143	ENSSHAG00000010394	SNRPB	74	80.226	Sarcophilus_harrisii
ENSTGUG00000005684	SNRPB	59	96.429	ENSSFOG00015002870	snrpb	74	80.226	Scleropages_formosus
ENSTGUG00000005684	SNRPB	59	97.143	ENSSMAG00000006766	snrpb	59	97.143	Scophthalmus_maximus
ENSTGUG00000005684	SNRPB	59	97.143	ENSSDUG00000018539	snrpb	70	83.529	Seriola_dumerili
ENSTGUG00000005684	SNRPB	59	97.143	ENSSLDG00000022391	snrpb	70	83.529	Seriola_lalandi_dorsalis
ENSTGUG00000005684	SNRPB	59	77.857	ENSSARG00000003084	SNRPB	76	64.972	Sorex_araneus
ENSTGUG00000005684	SNRPB	59	99.286	ENSSPUG00000015659	SNRPB	74	81.921	Sphenodon_punctatus
ENSTGUG00000005684	SNRPB	59	97.143	ENSSPAG00000021992	snrpb	70	83.529	Stegastes_partitus
ENSTGUG00000005684	SNRPB	95	64.035	ENSSSCG00000011966	-	74	50.000	Sus_scrofa
ENSTGUG00000005684	SNRPB	59	96.429	ENSSSCG00000040857	-	77	79.661	Sus_scrofa
ENSTGUG00000005684	SNRPB	59	97.143	ENSTRUG00000023094	snrpb	61	97.143	Takifugu_rubripes
ENSTGUG00000005684	SNRPB	59	97.143	ENSTNIG00000002991	snrpb	59	97.143	Tetraodon_nigroviridis
ENSTGUG00000005684	SNRPB	58	95.652	ENSUAMG00000005984	-	81	82.353	Ursus_americanus
ENSTGUG00000005684	SNRPB	59	94.286	ENSUMAG00000002123	-	65	94.286	Ursus_maritimus
ENSTGUG00000005684	SNRPB	59	95.714	ENSVVUG00000025654	-	74	79.096	Vulpes_vulpes
ENSTGUG00000005684	SNRPB	100	62.762	ENSVVUG00000010086	-	78	63.187	Vulpes_vulpes
ENSTGUG00000005684	SNRPB	59	98.571	ENSXETG00000027266	snrpb	59	98.571	Xenopus_tropicalis
ENSTGUG00000005684	SNRPB	56	97.037	ENSXMAG00000028767	snrpb	58	97.037	Xiphophorus_maculatus