EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTGUG00000005775 (Gene tree)
Gene ID
100230990
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Plus strand
Length
22822 bases
Position
chr19:6758551-6781372
Accession
100230990
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000005967tRNA_anti-codonPF01336.252.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000006026RPA1-2012740XM_002197447ENSTGUP00000005967613 (aa)XP_002197483H0Z5X0
Gene Model
Click here to download ENSTGUG00000005775's gene model file
Pathways
Pathway IDPathway NameSource
tgu03030DNA replicationKEGG
tgu03420Nucleotide excision repairKEGG
tgu03430Mismatch repairKEGG
tgu03440Homologous recombinationKEGG
tgu03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005775's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000005775RPA19960.626ENSAPOG00000011658rpa19961.084Acanthochromis_polyacanthus
ENSTGUG00000005775RPA19459.914ENSAPOG00000019409RPA18459.914Acanthochromis_polyacanthus
ENSTGUG00000005775RPA19972.801ENSAMEG00000007706RPA19972.801Ailuropoda_melanoleuca
ENSTGUG00000005775RPA19556.803ENSACIG00000007277rpa19956.803Amphilophus_citrinellus
ENSTGUG00000005775RPA19557.095ENSACIG00000012881RPA110057.095Amphilophus_citrinellus
ENSTGUG00000005775RPA19953.149ENSAOCG00000009003RPA19952.923Amphiprion_ocellaris
ENSTGUG00000005775RPA19962.562ENSAOCG00000023376rpa19962.674Amphiprion_ocellaris
ENSTGUG00000005775RPA19962.397ENSAPEG00000008634rpa19962.500Amphiprion_percula
ENSTGUG00000005775RPA19952.252ENSAPEG00000019132RPA19952.331Amphiprion_percula
ENSTGUG00000005775RPA19954.601ENSATEG00000006443RPA19954.601Anabas_testudineus
ENSTGUG00000005775RPA19462.349ENSATEG00000022024rpa19962.349Anabas_testudineus
ENSTGUG00000005775RPA19875.668ENSAPLG00000012442RPA110075.668Anas_platyrhynchos
ENSTGUG00000005775RPA19966.343ENSACAG00000014490RPA19966.343Anolis_carolinensis
ENSTGUG00000005775RPA19873.179ENSANAG00000023456RPA110073.179Aotus_nancymaae
ENSTGUG00000005775RPA19363.462ENSACLG00000006640rpa19963.462Astatotilapia_calliptera
ENSTGUG00000005775RPA19955.607ENSACLG00000005223RPA110055.607Astatotilapia_calliptera
ENSTGUG00000005775RPA19961.866ENSAMXG00000008418rpa19962.215Astyanax_mexicanus
ENSTGUG00000005775RPA19974.392ENSBTAG00000009711RPA110074.392Bos_taurus
ENSTGUG00000005775RPA19973.258ENSCJAG00000001848RPA110073.258Callithrix_jacchus
ENSTGUG00000005775RPA19974.230ENSCAFG00000019249RPA110074.230Canis_familiaris
ENSTGUG00000005775RPA19974.230ENSCAFG00020009847RPA110074.230Canis_lupus_dingo
ENSTGUG00000005775RPA19974.230ENSCHIG00000026308RPA110074.230Capra_hircus
ENSTGUG00000005775RPA19974.919ENSTSYG00000003482-10074.919Carlito_syrichta
ENSTGUG00000005775RPA19973.582ENSCPOG00000000035RPA110073.582Cavia_porcellus
ENSTGUG00000005775RPA19961.613ENSCCAG00000010981RPA110061.452Cebus_capucinus
ENSTGUG00000005775RPA19970.502ENSCLAG00000015045-10070.502Chinchilla_lanigera
ENSTGUG00000005775RPA19974.797ENSCLAG00000005185-9974.797Chinchilla_lanigera
ENSTGUG00000005775RPA19962.097ENSCSAG00000013833RPA110062.903Chlorocebus_sabaeus
ENSTGUG00000005775RPA19571.138ENSCHOG00000013540-10071.138Choloepus_hoffmanni
ENSTGUG00000005775RPA17277.904ENSCHOG00000009454-10077.904Choloepus_hoffmanni
ENSTGUG00000005775RPA110085.737ENSCPBG00000020377RPA110085.864Chrysemys_picta_bellii
ENSTGUG00000005775RPA19942.434ENSCING00000023482-9842.434Ciona_intestinalis
ENSTGUG00000005775RPA19871.927ENSCANG00000030911RPA110071.927Colobus_angolensis_palliatus
ENSTGUG00000005775RPA19974.475ENSCGRG00001008197Rpa19974.475Cricetulus_griseus_chok1gshd
ENSTGUG00000005775RPA18174.213ENSCGRG00000000582Rpa19974.213Cricetulus_griseus_crigri
ENSTGUG00000005775RPA19958.891ENSCSEG00000013066rpa19958.891Cynoglossus_semilaevis
ENSTGUG00000005775RPA19952.229ENSCSEG00000012726RPA19853.253Cynoglossus_semilaevis
ENSTGUG00000005775RPA19962.684ENSCVAG00000019431rpa19963.339Cyprinodon_variegatus
ENSTGUG00000005775RPA19451.487ENSCVAG00000013446-9551.487Cyprinodon_variegatus
ENSTGUG00000005775RPA19962.193ENSDARG00000003938rpa19962.193Danio_rerio
ENSTGUG00000005775RPA19874.629ENSDNOG00000017218RPA19874.629Dasypus_novemcinctus
ENSTGUG00000005775RPA19974.716ENSDORG00000006199Rpa110074.716Dipodomys_ordii
ENSTGUG00000005775RPA19941.626FBgn0010173RpA-709941.789Drosophila_melanogaster
ENSTGUG00000005775RPA18276.842ENSETEG00000017608RPA18276.842Echinops_telfairi
ENSTGUG00000005775RPA19874.465ENSEASG00005009372RPA19974.261Equus_asinus_asinus
ENSTGUG00000005775RPA19975.365ENSECAG00000023886RPA110075.365Equus_caballus
ENSTGUG00000005775RPA16977.619ENSEEUG00000002186-6877.619Erinaceus_europaeus
ENSTGUG00000005775RPA19961.626ENSELUG00000021071rpa19961.626Esox_lucius
ENSTGUG00000005775RPA18856.401ENSELUG00000006136RPA19956.401Esox_lucius
ENSTGUG00000005775RPA19973.948ENSFCAG00000006306RPA19973.948Felis_catus
ENSTGUG00000005775RPA110097.236ENSFALG00000006575RPA110097.236Ficedula_albicollis
ENSTGUG00000005775RPA19974.838ENSFDAG00000007720RPA110074.838Fukomys_damarensis
ENSTGUG00000005775RPA19962.109ENSFHEG00000003580rpa19962.109Fundulus_heteroclitus
ENSTGUG00000005775RPA19959.046ENSGMOG00000010382rpa19959.046Gadus_morhua
ENSTGUG00000005775RPA110091.857ENSGALG00000003072RPA110091.857Gallus_gallus
ENSTGUG00000005775RPA19952.656ENSGAFG00000020953RPA110053.495Gambusia_affinis
ENSTGUG00000005775RPA19862.583ENSGAFG00000012916rpa19962.583Gambusia_affinis
ENSTGUG00000005775RPA19960.755ENSGACG00000010856rpa19960.755Gasterosteus_aculeatus
ENSTGUG00000005775RPA110085.413ENSGAGG00000013611RPA110085.413Gopherus_agassizii
ENSTGUG00000005775RPA19971.941ENSGGOG00000014186RPA110071.941Gorilla_gorilla
ENSTGUG00000005775RPA19652.020ENSHBUG00000009348RPA19952.020Haplochromis_burtoni
ENSTGUG00000005775RPA19962.623ENSHBUG00000017773rpa19962.623Haplochromis_burtoni
ENSTGUG00000005775RPA19974.146ENSHGLG00000008846RPA110074.472Heterocephalus_glaber_female
ENSTGUG00000005775RPA19974.146ENSHGLG00100017755-10074.472Heterocephalus_glaber_male
ENSTGUG00000005775RPA19969.854ENSHGLG00100000799-10069.854Heterocephalus_glaber_male
ENSTGUG00000005775RPA19962.723ENSHGLG00100002005-10063.047Heterocephalus_glaber_male
ENSTGUG00000005775RPA19943.831ENSHCOG00000000351RPA19943.226Hippocampus_comes
ENSTGUG00000005775RPA19959.344ENSHCOG00000001401rpa19959.672Hippocampus_comes
ENSTGUG00000005775RPA19961.165ENSIPUG00000004400rpa19961.165Ictalurus_punctatus
ENSTGUG00000005775RPA19868.801ENSSTOG00000022475RPA19868.801Ictidomys_tridecemlineatus
ENSTGUG00000005775RPA19574.024ENSJJAG00000000876Rpa19874.024Jaculus_jaculus
ENSTGUG00000005775RPA19954.106ENSKMAG00000000234RPA110054.106Kryptolebias_marmoratus
ENSTGUG00000005775RPA19959.869ENSKMAG00000005605rpa19960.522Kryptolebias_marmoratus
ENSTGUG00000005775RPA19963.393ENSLBEG00000002281RPA19163.393Labrus_bergylta
ENSTGUG00000005775RPA19962.171ENSLBEG00000021604rpa19962.171Labrus_bergylta
ENSTGUG00000005775RPA18166.667ENSLACG00000007210RPA19966.667Latimeria_chalumnae
ENSTGUG00000005775RPA19965.246ENSLOCG00000006397rpa19965.246Lepisosteus_oculatus
ENSTGUG00000005775RPA19972.947ENSLAFG00000015354RPA19972.947Loxodonta_africana
ENSTGUG00000005775RPA18273.123ENSMFAG00000036138-9974.111Macaca_fascicularis
ENSTGUG00000005775RPA19873.432ENSMMUG00000011604-10074.257Macaca_mulatta
ENSTGUG00000005775RPA19967.537ENSMMUG00000002442-10067.537Macaca_mulatta
ENSTGUG00000005775RPA18871.702ENSMNEG00000029837-9971.702Macaca_nemestrina
ENSTGUG00000005775RPA19971.591ENSMNEG00000031632-10072.403Macaca_nemestrina
ENSTGUG00000005775RPA19868.586ENSMLEG00000038768-10069.408Mandrillus_leucophaeus
ENSTGUG00000005775RPA19960.691ENSMAMG00000017993rpa19960.691Mastacembelus_armatus
ENSTGUG00000005775RPA19950.742ENSMAMG00000020097RPA19951.263Mastacembelus_armatus
ENSTGUG00000005775RPA19955.607ENSMZEG00005024731RPA110055.607Maylandia_zebra
ENSTGUG00000005775RPA19963.115ENSMZEG00005007551rpa19963.115Maylandia_zebra
ENSTGUG00000005775RPA19991.653ENSMGAG00000005315RPA19991.653Meleagris_gallopavo
ENSTGUG00000005775RPA19773.710ENSMAUG00000010474Rpa19973.877Mesocricetus_auratus
ENSTGUG00000005775RPA19974.230ENSMICG00000012867RPA110074.230Microcebus_murinus
ENSTGUG00000005775RPA19973.941ENSMOCG00000013019Rpa19973.941Microtus_ochrogaster
ENSTGUG00000005775RPA19855.150ENSMMOG00000010868RPA19855.150Mola_mola
ENSTGUG00000005775RPA19960.427ENSMMOG00000014292rpa19961.525Mola_mola
ENSTGUG00000005775RPA19978.049ENSMODG00000010549RPA19978.049Monodelphis_domestica
ENSTGUG00000005775RPA19961.803ENSMALG00000011453rpa19961.803Monopterus_albus
ENSTGUG00000005775RPA19961.161ENSMALG00000001208RPA18461.161Monopterus_albus
ENSTGUG00000005775RPA19973.582MGP_CAROLIEiJ_G0016734Rpa19973.582Mus_caroli
ENSTGUG00000005775RPA19971.750ENSMUSG00000000751Rpa19971.750Mus_musculus
ENSTGUG00000005775RPA19973.387MGP_PahariEiJ_G0017871Rpa19973.387Mus_pahari
ENSTGUG00000005775RPA19971.635MGP_SPRETEiJ_G0017577Rpa19971.635Mus_spretus
ENSTGUG00000005775RPA19974.716ENSMPUG00000013119RPA110074.716Mustela_putorius_furo
ENSTGUG00000005775RPA19972.186ENSMLUG00000006113RPA110072.186Myotis_lucifugus
ENSTGUG00000005775RPA19574.576ENSNGAG00000004522Rpa19474.576Nannospalax_galili
ENSTGUG00000005775RPA19463.432ENSNBRG00000020595rpa19963.432Neolamprologus_brichardi
ENSTGUG00000005775RPA19854.530ENSNBRG00000009672RPA19754.530Neolamprologus_brichardi
ENSTGUG00000005775RPA19973.744ENSNLEG00000017149RPA110073.906Nomascus_leucogenys
ENSTGUG00000005775RPA19866.667ENSMEUG00000006714RPA19966.667Notamacropus_eugenii
ENSTGUG00000005775RPA19574.247ENSODEG00000009038RPA19674.247Octodon_degus
ENSTGUG00000005775RPA19963.948ENSONIG00000013135rpa19963.948Oreochromis_niloticus
ENSTGUG00000005775RPA19877.944ENSOANG00000010880RPA19977.944Ornithorhynchus_anatinus
ENSTGUG00000005775RPA19972.488ENSOCUG00000001504RPA110072.488Oryctolagus_cuniculus
ENSTGUG00000005775RPA19952.511ENSORLG00000003368RPA19952.511Oryzias_latipes
ENSTGUG00000005775RPA19960.591ENSORLG00000004856rpa19960.591Oryzias_latipes
ENSTGUG00000005775RPA19960.591ENSORLG00020008980rpa19960.591Oryzias_latipes_hni
ENSTGUG00000005775RPA19951.647ENSORLG00020015284RPA19951.647Oryzias_latipes_hni
ENSTGUG00000005775RPA16761.800ENSORLG00015005867-9461.800Oryzias_latipes_hsok
ENSTGUG00000005775RPA19952.713ENSORLG00015020383RPA19952.713Oryzias_latipes_hsok
ENSTGUG00000005775RPA19960.591ENSORLG00015013982rpa19960.591Oryzias_latipes_hsok
ENSTGUG00000005775RPA19959.442ENSOMEG00000004704rpa19959.442Oryzias_melastigma
ENSTGUG00000005775RPA19853.312ENSOMEG00000011040RPA19956.454Oryzias_melastigma
ENSTGUG00000005775RPA19470.629ENSOGAG00000029379-10077.249Otolemur_garnettii
ENSTGUG00000005775RPA19973.582ENSOGAG00000005581-10073.582Otolemur_garnettii
ENSTGUG00000005775RPA19974.392ENSOARG00000014479RPA110074.392Ovis_aries
ENSTGUG00000005775RPA19973.744ENSPPAG00000039680RPA110073.906Pan_paniscus
ENSTGUG00000005775RPA19973.948ENSPPRG00000011807RPA19973.948Panthera_pardus
ENSTGUG00000005775RPA19974.110ENSPTIG00000007898RPA19974.110Panthera_tigris_altaica
ENSTGUG00000005775RPA19973.744ENSPTRG00000008539RPA110073.906Pan_troglodytes
ENSTGUG00000005775RPA19973.744ENSPANG00000024592RPA110074.554Papio_anubis
ENSTGUG00000005775RPA19460.862ENSPKIG00000008053rpa19460.862Paramormyrops_kingsleyae
ENSTGUG00000005775RPA19883.940ENSPSIG00000015617RPA110083.940Pelodiscus_sinensis
ENSTGUG00000005775RPA19959.473ENSPMGG00000011589rpa19959.638Periophthalmus_magnuspinnatus
ENSTGUG00000005775RPA19952.496ENSPMGG00000000543RPA19954.885Periophthalmus_magnuspinnatus
ENSTGUG00000005775RPA19974.430ENSPEMG00000021061Rpa19974.430Peromyscus_maniculatus_bairdii
ENSTGUG00000005775RPA19975.649ENSPCIG00000019049RPA19975.728Phascolarctos_cinereus
ENSTGUG00000005775RPA19862.914ENSPFOG00000003987rpa19962.914Poecilia_formosa
ENSTGUG00000005775RPA19862.645ENSPLAG00000004984rpa19962.645Poecilia_latipinna
ENSTGUG00000005775RPA19453.226ENSPLAG00000008844-9753.226Poecilia_latipinna
ENSTGUG00000005775RPA19452.724ENSPMEG00000003627-9753.387Poecilia_mexicana
ENSTGUG00000005775RPA19862.914ENSPMEG00000020602rpa19962.914Poecilia_mexicana
ENSTGUG00000005775RPA19455.729ENSPREG00000010174rpa19655.729Poecilia_reticulata
ENSTGUG00000005775RPA19951.699ENSPREG00000010119RPA110051.699Poecilia_reticulata
ENSTGUG00000005775RPA19973.906ENSPCOG00000001799RPA110073.906Propithecus_coquereli
ENSTGUG00000005775RPA19973.171ENSPVAG00000002149RPA110072.934Pteropus_vampyrus
ENSTGUG00000005775RPA19962.951ENSPNYG00000016316rpa19963.415Pundamilia_nyererei
ENSTGUG00000005775RPA19955.296ENSPNYG00000024165RPA110055.296Pundamilia_nyererei
ENSTGUG00000005775RPA19855.132ENSPNAG00000008599rpa19656.239Pygocentrus_nattereri
ENSTGUG00000005775RPA19776.812ENSRNOG00000003123Rpa19974.593Rattus_norvegicus
ENSTGUG00000005775RPA19974.716ENSRBIG00000036587RPA110074.716Rhinopithecus_bieti
ENSTGUG00000005775RPA19970.016ENSRROG00000043278RPA110070.016Rhinopithecus_roxellana
ENSTGUG00000005775RPA19834.022YAR007CRFA19934.022Saccharomyces_cerevisiae
ENSTGUG00000005775RPA19870.462ENSSBOG00000030233RPA19970.579Saimiri_boliviensis_boliviensis
ENSTGUG00000005775RPA19976.759ENSSHAG00000007969RPA19876.759Sarcophilus_harrisii
ENSTGUG00000005775RPA19963.054ENSSFOG00015005362rpa19263.054Scleropages_formosus
ENSTGUG00000005775RPA19952.568ENSSMAG00000019746RPA19952.417Scophthalmus_maximus
ENSTGUG00000005775RPA19951.245ENSSDUG00000016358RPA19952.276Seriola_dumerili
ENSTGUG00000005775RPA19961.741ENSSDUG00000011949rpa19961.741Seriola_dumerili
ENSTGUG00000005775RPA19948.397ENSSLDG00000020784RPA19950.585Seriola_lalandi_dorsalis
ENSTGUG00000005775RPA19961.576ENSSLDG00000011806rpa19961.576Seriola_lalandi_dorsalis
ENSTGUG00000005775RPA18785.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSTGUG00000005775RPA19878.607ENSSPUG00000007223RPA110078.607Sphenodon_punctatus
ENSTGUG00000005775RPA19956.250ENSSPAG00000011165RPA19956.250Stegastes_partitus
ENSTGUG00000005775RPA19961.576ENSSPAG00000009903rpa19961.576Stegastes_partitus
ENSTGUG00000005775RPA19873.841ENSSSCG00000017822RPA110073.841Sus_scrofa
ENSTGUG00000005775RPA19962.069ENSTRUG00000003616rpa19962.069Takifugu_rubripes
ENSTGUG00000005775RPA19962.383ENSTRUG00000000405RPA19060.394Takifugu_rubripes
ENSTGUG00000005775RPA19962.745ENSTNIG00000016199rpa19962.745Tetraodon_nigroviridis
ENSTGUG00000005775RPA17977.778ENSTBEG00000002709RPA18177.778Tupaia_belangeri
ENSTGUG00000005775RPA19974.959ENSTTRG00000001169RPA19974.959Tursiops_truncatus
ENSTGUG00000005775RPA19676.596ENSUAMG00000015676RPA19784.314Ursus_americanus
ENSTGUG00000005775RPA19974.068ENSUMAG00000009328RPA110074.230Ursus_maritimus
ENSTGUG00000005775RPA19973.214ENSVPAG00000009443RPA110073.214Vicugna_pacos
ENSTGUG00000005775RPA19974.068ENSVVUG00000021715RPA110074.068Vulpes_vulpes
ENSTGUG00000005775RPA19970.425ENSXETG00000013538rpa19970.820Xenopus_tropicalis
ENSTGUG00000005775RPA19554.983ENSXCOG00000009899-9954.983Xiphophorus_couchianus
ENSTGUG00000005775RPA19361.150ENSXCOG00000010068rpa19461.511Xiphophorus_couchianus
ENSTGUG00000005775RPA19861.881ENSXMAG00000004102rpa19962.478Xiphophorus_maculatus
ENSTGUG00000005775RPA19362.138ENSXMAG00000010333RPA19162.138Xiphophorus_maculatus

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