EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005839 (Gene tree)
Gene ID: 100220036
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 5749 bases
Position: chr3:23670653-23676401
Accession: 100220036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006021	RNA_pol_Rpc34	PF05158.12	4.3e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006080	POLR3F-201	945	-	ENSTGUP00000006021	314 (aa)	XP_002198916	H0Z623

Gene Model

Click here to download ENSTGUG00000005839's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03020	RNA polymerase	KEGG
tgu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005839	POLR3F	100	93.354	ENSG00000132664	POLR3F	100	93.354	Homo_sapiens
ENSTGUG00000005839	POLR3F	100	87.342	ENSAPOG00000008271	polr3f	100	87.342	Acanthochromis_polyacanthus
ENSTGUG00000005839	POLR3F	100	93.038	ENSAMEG00000005222	POLR3F	100	93.038	Ailuropoda_melanoleuca
ENSTGUG00000005839	POLR3F	100	82.803	ENSACIG00000006705	polr3f	100	82.803	Amphilophus_citrinellus
ENSTGUG00000005839	POLR3F	100	87.975	ENSAOCG00000000687	polr3f	100	87.975	Amphiprion_ocellaris
ENSTGUG00000005839	POLR3F	100	87.658	ENSAPEG00000015263	polr3f	100	87.658	Amphiprion_percula
ENSTGUG00000005839	POLR3F	88	90.909	ENSATEG00000015539	polr3f	100	90.909	Anabas_testudineus
ENSTGUG00000005839	POLR3F	88	97.455	ENSAPLG00000005533	POLR3F	100	97.455	Anas_platyrhynchos
ENSTGUG00000005839	POLR3F	100	91.401	ENSACAG00000014293	POLR3F	100	91.401	Anolis_carolinensis
ENSTGUG00000005839	POLR3F	100	93.671	ENSANAG00000026726	POLR3F	100	93.671	Aotus_nancymaae
ENSTGUG00000005839	POLR3F	100	88.291	ENSACLG00000003615	polr3f	100	88.291	Astatotilapia_calliptera
ENSTGUG00000005839	POLR3F	100	89.809	ENSAMXG00000036020	polr3f	100	89.809	Astyanax_mexicanus
ENSTGUG00000005839	POLR3F	100	93.354	ENSBTAG00000008825	POLR3F	100	93.354	Bos_taurus
ENSTGUG00000005839	POLR3F	98	33.766	WBGene00021112	W09C3.4	98	33.766	Caenorhabditis_elegans
ENSTGUG00000005839	POLR3F	100	93.671	ENSCJAG00000005159	POLR3F	100	93.671	Callithrix_jacchus
ENSTGUG00000005839	POLR3F	100	92.722	ENSCAFG00000005420	POLR3F	100	92.722	Canis_familiaris
ENSTGUG00000005839	POLR3F	100	92.722	ENSCAFG00020027500	POLR3F	100	92.722	Canis_lupus_dingo
ENSTGUG00000005839	POLR3F	100	93.354	ENSCHIG00000014743	POLR3F	100	93.354	Capra_hircus
ENSTGUG00000005839	POLR3F	100	93.354	ENSTSYG00000004207	POLR3F	100	93.354	Carlito_syrichta
ENSTGUG00000005839	POLR3F	94	54.054	ENSCAPG00000008423	POLR3F	100	54.054	Cavia_aperea
ENSTGUG00000005839	POLR3F	100	93.671	ENSCPOG00000002400	POLR3F	100	93.671	Cavia_porcellus
ENSTGUG00000005839	POLR3F	100	82.595	ENSCCAG00000021800	POLR3F	100	82.595	Cebus_capucinus
ENSTGUG00000005839	POLR3F	100	93.671	ENSCATG00000019507	POLR3F	100	93.671	Cercocebus_atys
ENSTGUG00000005839	POLR3F	100	93.671	ENSCLAG00000016296	POLR3F	100	93.671	Chinchilla_lanigera
ENSTGUG00000005839	POLR3F	100	93.671	ENSCSAG00000011513	POLR3F	100	93.671	Chlorocebus_sabaeus
ENSTGUG00000005839	POLR3F	73	93.258	ENSCHOG00000013268	POLR3F	73	93.258	Choloepus_hoffmanni
ENSTGUG00000005839	POLR3F	88	93.818	ENSCPBG00000023473	POLR3F	100	93.818	Chrysemys_picta_bellii
ENSTGUG00000005839	POLR3F	99	61.783	ENSCING00000001212	-	99	61.783	Ciona_intestinalis
ENSTGUG00000005839	POLR3F	71	59.641	ENSCSAVG00000003340	-	96	65.680	Ciona_savignyi
ENSTGUG00000005839	POLR3F	92	93.127	ENSCANG00000037390	POLR3F	100	93.127	Colobus_angolensis_palliatus
ENSTGUG00000005839	POLR3F	100	92.089	ENSCGRG00001002032	Polr3f	100	92.089	Cricetulus_griseus_chok1gshd
ENSTGUG00000005839	POLR3F	100	92.089	ENSCGRG00000010852	Polr3f	100	92.089	Cricetulus_griseus_crigri
ENSTGUG00000005839	POLR3F	100	85.443	ENSCSEG00000001247	polr3f	100	85.443	Cynoglossus_semilaevis
ENSTGUG00000005839	POLR3F	100	86.076	ENSCVAG00000007611	polr3f	100	86.076	Cyprinodon_variegatus
ENSTGUG00000005839	POLR3F	100	90.127	ENSDARG00000012572	polr3f	100	90.127	Danio_rerio
ENSTGUG00000005839	POLR3F	100	89.873	ENSDNOG00000010719	POLR3F	100	89.873	Dasypus_novemcinctus
ENSTGUG00000005839	POLR3F	100	93.038	ENSDORG00000016352	Polr3f	100	93.038	Dipodomys_ordii
ENSTGUG00000005839	POLR3F	95	49.000	FBgn0038951	CG5380	99	49.000	Drosophila_melanogaster
ENSTGUG00000005839	POLR3F	90	56.738	ENSETEG00000015485	-	100	56.738	Echinops_telfairi
ENSTGUG00000005839	POLR3F	100	76.752	ENSEBUG00000006783	polr3f	100	76.752	Eptatretus_burgeri
ENSTGUG00000005839	POLR3F	100	93.354	ENSEASG00005002022	POLR3F	100	93.354	Equus_asinus_asinus
ENSTGUG00000005839	POLR3F	100	93.354	ENSECAG00000009920	POLR3F	100	93.354	Equus_caballus
ENSTGUG00000005839	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSTGUG00000005839	POLR3F	100	90.127	ENSELUG00000001558	polr3f	100	90.127	Esox_lucius
ENSTGUG00000005839	POLR3F	100	93.038	ENSFCAG00000013828	POLR3F	100	93.038	Felis_catus
ENSTGUG00000005839	POLR3F	88	100.000	ENSFALG00000007623	POLR3F	100	100.000	Ficedula_albicollis
ENSTGUG00000005839	POLR3F	100	93.354	ENSFDAG00000002528	POLR3F	100	93.354	Fukomys_damarensis
ENSTGUG00000005839	POLR3F	100	84.177	ENSFHEG00000006450	polr3f	100	84.177	Fundulus_heteroclitus
ENSTGUG00000005839	POLR3F	100	98.089	ENSGALG00000008749	POLR3F	100	98.089	Gallus_gallus
ENSTGUG00000005839	POLR3F	100	86.076	ENSGAFG00000003698	polr3f	100	86.076	Gambusia_affinis
ENSTGUG00000005839	POLR3F	100	93.949	ENSGAGG00000006151	POLR3F	100	93.949	Gopherus_agassizii
ENSTGUG00000005839	POLR3F	100	93.354	ENSGGOG00000011543	POLR3F	100	93.354	Gorilla_gorilla
ENSTGUG00000005839	POLR3F	100	88.608	ENSHBUG00000013806	polr3f	100	88.608	Haplochromis_burtoni
ENSTGUG00000005839	POLR3F	100	93.354	ENSHGLG00000011867	POLR3F	100	93.354	Heterocephalus_glaber_female
ENSTGUG00000005839	POLR3F	100	93.354	ENSHGLG00100012577	POLR3F	100	93.354	Heterocephalus_glaber_male
ENSTGUG00000005839	POLR3F	100	77.532	ENSHCOG00000011751	polr3f	100	77.532	Hippocampus_comes
ENSTGUG00000005839	POLR3F	100	89.172	ENSIPUG00000013347	polr3f	100	89.172	Ictalurus_punctatus
ENSTGUG00000005839	POLR3F	100	93.038	ENSSTOG00000013588	POLR3F	100	93.038	Ictidomys_tridecemlineatus
ENSTGUG00000005839	POLR3F	100	92.405	ENSJJAG00000017513	Polr3f	100	92.405	Jaculus_jaculus
ENSTGUG00000005839	POLR3F	88	82.909	ENSKMAG00000016495	polr3f	100	82.909	Kryptolebias_marmoratus
ENSTGUG00000005839	POLR3F	74	93.103	ENSLBEG00000011998	polr3f	100	93.103	Labrus_bergylta
ENSTGUG00000005839	POLR3F	100	90.764	ENSLACG00000009371	POLR3F	100	90.764	Latimeria_chalumnae
ENSTGUG00000005839	POLR3F	100	92.038	ENSLOCG00000015701	polr3f	100	92.038	Lepisosteus_oculatus
ENSTGUG00000005839	POLR3F	100	93.038	ENSLAFG00000004929	POLR3F	100	93.038	Loxodonta_africana
ENSTGUG00000005839	POLR3F	100	93.671	ENSMFAG00000002227	POLR3F	100	93.671	Macaca_fascicularis
ENSTGUG00000005839	POLR3F	88	96.000	ENSMMUG00000004143	POLR3F	100	96.000	Macaca_mulatta
ENSTGUG00000005839	POLR3F	100	93.671	ENSMNEG00000033404	POLR3F	100	93.671	Macaca_nemestrina
ENSTGUG00000005839	POLR3F	100	93.671	ENSMLEG00000021905	POLR3F	100	93.671	Mandrillus_leucophaeus
ENSTGUG00000005839	POLR3F	100	87.658	ENSMAMG00000017975	polr3f	100	87.658	Mastacembelus_armatus
ENSTGUG00000005839	POLR3F	100	88.608	ENSMZEG00005015134	polr3f	100	88.608	Maylandia_zebra
ENSTGUG00000005839	POLR3F	100	98.089	ENSMGAG00000006691	POLR3F	100	98.089	Meleagris_gallopavo
ENSTGUG00000005839	POLR3F	100	92.405	ENSMAUG00000020176	Polr3f	100	92.405	Mesocricetus_auratus
ENSTGUG00000005839	POLR3F	100	93.038	ENSMICG00000044519	POLR3F	100	93.038	Microcebus_murinus
ENSTGUG00000005839	POLR3F	100	92.722	ENSMOCG00000018352	Polr3f	100	92.722	Microtus_ochrogaster
ENSTGUG00000005839	POLR3F	94	90.236	ENSMMOG00000018477	polr3f	100	90.236	Mola_mola
ENSTGUG00000005839	POLR3F	100	93.038	ENSMODG00000005624	POLR3F	100	93.038	Monodelphis_domestica
ENSTGUG00000005839	POLR3F	100	88.608	ENSMALG00000006685	polr3f	100	88.608	Monopterus_albus
ENSTGUG00000005839	POLR3F	100	92.089	MGP_CAROLIEiJ_G0024385	Polr3f	100	92.089	Mus_caroli
ENSTGUG00000005839	POLR3F	100	92.089	ENSMUSG00000027427	Polr3f	100	92.089	Mus_musculus
ENSTGUG00000005839	POLR3F	100	92.089	MGP_PahariEiJ_G0025829	Polr3f	100	92.089	Mus_pahari
ENSTGUG00000005839	POLR3F	100	92.089	MGP_SPRETEiJ_G0025304	Polr3f	100	92.089	Mus_spretus
ENSTGUG00000005839	POLR3F	100	71.385	ENSMPUG00000001252	-	100	71.385	Mustela_putorius_furo
ENSTGUG00000005839	POLR3F	100	93.038	ENSMLUG00000014844	POLR3F	100	93.038	Myotis_lucifugus
ENSTGUG00000005839	POLR3F	100	93.038	ENSNGAG00000010898	Polr3f	100	93.038	Nannospalax_galili
ENSTGUG00000005839	POLR3F	100	88.924	ENSNBRG00000020796	polr3f	100	88.924	Neolamprologus_brichardi
ENSTGUG00000005839	POLR3F	100	93.354	ENSNLEG00000009778	POLR3F	100	93.354	Nomascus_leucogenys
ENSTGUG00000005839	POLR3F	94	88.814	ENSMEUG00000010320	POLR3F	100	88.814	Notamacropus_eugenii
ENSTGUG00000005839	POLR3F	100	92.405	ENSOPRG00000003385	POLR3F	100	92.405	Ochotona_princeps
ENSTGUG00000005839	POLR3F	100	93.987	ENSODEG00000011521	POLR3F	100	93.987	Octodon_degus
ENSTGUG00000005839	POLR3F	100	87.658	ENSONIG00000006858	polr3f	100	87.658	Oreochromis_niloticus
ENSTGUG00000005839	POLR3F	100	92.405	ENSOANG00000001253	POLR3F	100	92.405	Ornithorhynchus_anatinus
ENSTGUG00000005839	POLR3F	100	93.354	ENSOCUG00000015067	POLR3F	100	93.354	Oryctolagus_cuniculus
ENSTGUG00000005839	POLR3F	100	85.759	ENSORLG00000022412	polr3f	100	85.759	Oryzias_latipes
ENSTGUG00000005839	POLR3F	100	85.759	ENSORLG00020021944	polr3f	100	85.759	Oryzias_latipes_hni
ENSTGUG00000005839	POLR3F	100	92.089	ENSOGAG00000002916	POLR3F	100	92.089	Otolemur_garnettii
ENSTGUG00000005839	POLR3F	100	93.354	ENSOARG00000000315	-	100	93.354	Ovis_aries
ENSTGUG00000005839	POLR3F	100	57.911	ENSOARG00000008647	-	100	57.911	Ovis_aries
ENSTGUG00000005839	POLR3F	100	93.354	ENSPPAG00000036681	POLR3F	100	93.354	Pan_paniscus
ENSTGUG00000005839	POLR3F	100	93.038	ENSPPRG00000024604	POLR3F	100	93.038	Panthera_pardus
ENSTGUG00000005839	POLR3F	100	93.038	ENSPTIG00000020292	POLR3F	100	93.038	Panthera_tigris_altaica
ENSTGUG00000005839	POLR3F	100	93.354	ENSPTRG00000013287	POLR3F	100	93.354	Pan_troglodytes
ENSTGUG00000005839	POLR3F	100	93.671	ENSPANG00000025015	POLR3F	100	93.671	Papio_anubis
ENSTGUG00000005839	POLR3F	100	90.446	ENSPKIG00000004427	polr3f	100	90.446	Paramormyrops_kingsleyae
ENSTGUG00000005839	POLR3F	88	94.182	ENSPSIG00000016613	POLR3F	100	94.182	Pelodiscus_sinensis
ENSTGUG00000005839	POLR3F	100	53.605	ENSPMGG00000018350	polr3f	100	56.962	Periophthalmus_magnuspinnatus
ENSTGUG00000005839	POLR3F	100	93.038	ENSPEMG00000006966	Polr3f	100	93.038	Peromyscus_maniculatus_bairdii
ENSTGUG00000005839	POLR3F	100	81.210	ENSPMAG00000005530	polr3f	100	81.210	Petromyzon_marinus
ENSTGUG00000005839	POLR3F	100	93.354	ENSPCIG00000000908	POLR3F	85	93.354	Phascolarctos_cinereus
ENSTGUG00000005839	POLR3F	100	86.076	ENSPFOG00000018334	polr3f	100	86.076	Poecilia_formosa
ENSTGUG00000005839	POLR3F	100	86.076	ENSPLAG00000021803	polr3f	100	86.076	Poecilia_latipinna
ENSTGUG00000005839	POLR3F	100	86.076	ENSPMEG00000013150	polr3f	100	86.076	Poecilia_mexicana
ENSTGUG00000005839	POLR3F	100	86.076	ENSPREG00000005278	polr3f	100	86.076	Poecilia_reticulata
ENSTGUG00000005839	POLR3F	100	93.354	ENSPPYG00000010737	POLR3F	100	93.354	Pongo_abelii
ENSTGUG00000005839	POLR3F	66	94.595	ENSPCAG00000004893	POLR3F	71	94.595	Procavia_capensis
ENSTGUG00000005839	POLR3F	100	93.038	ENSPCOG00000004543	POLR3F	100	93.038	Propithecus_coquereli
ENSTGUG00000005839	POLR3F	100	92.722	ENSPVAG00000000403	POLR3F	100	92.722	Pteropus_vampyrus
ENSTGUG00000005839	POLR3F	100	88.608	ENSPNYG00000016276	polr3f	100	88.608	Pundamilia_nyererei
ENSTGUG00000005839	POLR3F	100	90.446	ENSPNAG00000005164	polr3f	100	90.446	Pygocentrus_nattereri
ENSTGUG00000005839	POLR3F	100	92.405	ENSRNOG00000007548	Polr3f	85	92.405	Rattus_norvegicus
ENSTGUG00000005839	POLR3F	100	93.671	ENSRBIG00000021268	POLR3F	100	93.671	Rhinopithecus_bieti
ENSTGUG00000005839	POLR3F	100	93.671	ENSRROG00000039911	POLR3F	100	93.671	Rhinopithecus_roxellana
ENSTGUG00000005839	POLR3F	100	93.671	ENSSBOG00000018207	POLR3F	100	93.671	Saimiri_boliviensis_boliviensis
ENSTGUG00000005839	POLR3F	100	73.186	ENSSHAG00000018160	POLR3F	100	72.871	Sarcophilus_harrisii
ENSTGUG00000005839	POLR3F	100	91.401	ENSSFOG00015022433	polr3f	100	91.401	Scleropages_formosus
ENSTGUG00000005839	POLR3F	100	85.759	ENSSMAG00000021029	polr3f	100	85.759	Scophthalmus_maximus
ENSTGUG00000005839	POLR3F	100	78.165	ENSSDUG00000022435	polr3f	100	78.165	Seriola_dumerili
ENSTGUG00000005839	POLR3F	100	88.291	ENSSLDG00000012761	polr3f	100	88.291	Seriola_lalandi_dorsalis
ENSTGUG00000005839	POLR3F	100	83.861	ENSSARG00000006039	POLR3F	100	83.861	Sorex_araneus
ENSTGUG00000005839	POLR3F	100	93.631	ENSSPUG00000001873	POLR3F	100	93.631	Sphenodon_punctatus
ENSTGUG00000005839	POLR3F	100	80.063	ENSSPAG00000002092	polr3f	100	80.063	Stegastes_partitus
ENSTGUG00000005839	POLR3F	100	92.722	ENSSSCG00000007095	POLR3F	100	95.690	Sus_scrofa
ENSTGUG00000005839	POLR3F	100	87.025	ENSTRUG00000012101	polr3f	100	87.025	Takifugu_rubripes
ENSTGUG00000005839	POLR3F	100	85.443	ENSTNIG00000006456	polr3f	100	85.443	Tetraodon_nigroviridis
ENSTGUG00000005839	POLR3F	100	76.899	ENSTBEG00000007921	POLR3F	100	76.899	Tupaia_belangeri
ENSTGUG00000005839	POLR3F	100	92.722	ENSTTRG00000002580	POLR3F	100	92.722	Tursiops_truncatus
ENSTGUG00000005839	POLR3F	53	95.181	ENSUAMG00000024166	POLR3F	100	95.181	Ursus_americanus
ENSTGUG00000005839	POLR3F	100	93.354	ENSUMAG00000024944	POLR3F	100	93.354	Ursus_maritimus
ENSTGUG00000005839	POLR3F	100	92.405	ENSVPAG00000009063	POLR3F	100	92.405	Vicugna_pacos
ENSTGUG00000005839	POLR3F	100	92.722	ENSVVUG00000012925	POLR3F	100	92.722	Vulpes_vulpes
ENSTGUG00000005839	POLR3F	100	89.172	ENSXETG00000024898	polr3f	100	89.172	Xenopus_tropicalis
ENSTGUG00000005839	POLR3F	88	88.000	ENSXCOG00000010301	polr3f	100	88.000	Xiphophorus_couchianus
ENSTGUG00000005839	POLR3F	100	85.759	ENSXMAG00000004604	polr3f	100	85.759	Xiphophorus_maculatus