EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005919 (Gene tree)
Gene ID: 100224758
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 48484 bases
Position: chr11:5286352-5334835
Accession: 7877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006116	Not1	PF04054.15	5.9e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006175	CNOT1-201	7140	-	ENSTGUP00000006116	2379 (aa)	-	H0Z6B8

Gene Model

Click here to download ENSTGUG00000005919's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005919	CNOT1	100	97.562	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSTGUG00000005919	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSTGUG00000005919	CNOT1	100	97.394	ENSAMEG00000017298	CNOT1	100	97.394	Ailuropoda_melanoleuca
ENSTGUG00000005919	CNOT1	90	89.530	ENSACIG00000016003	cnot1	100	89.763	Amphilophus_citrinellus
ENSTGUG00000005919	CNOT1	100	90.063	ENSAPEG00000022342	cnot1	100	90.021	Amphiprion_percula
ENSTGUG00000005919	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSTGUG00000005919	CNOT1	100	99.119	ENSAPLG00000007162	CNOT1	100	99.119	Anas_platyrhynchos
ENSTGUG00000005919	CNOT1	91	96.989	ENSACAG00000001602	CNOT1	98	96.989	Anolis_carolinensis
ENSTGUG00000005919	CNOT1	100	94.686	ENSANAG00000038198	CNOT1	100	94.686	Aotus_nancymaae
ENSTGUG00000005919	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSTGUG00000005919	CNOT1	100	90.588	ENSAMXG00000013170	cnot1	100	91.096	Astyanax_mexicanus
ENSTGUG00000005919	CNOT1	100	97.646	ENSBTAG00000020782	CNOT1	100	98.403	Bos_taurus
ENSTGUG00000005919	CNOT1	82	39.966	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSTGUG00000005919	CNOT1	100	97.520	ENSCJAG00000011318	CNOT1	100	97.520	Callithrix_jacchus
ENSTGUG00000005919	CNOT1	100	97.315	ENSCAFG00000008426	CNOT1	100	97.315	Canis_familiaris
ENSTGUG00000005919	CNOT1	100	96.566	ENSCAFG00020010156	CNOT1	100	96.585	Canis_lupus_dingo
ENSTGUG00000005919	CNOT1	100	97.646	ENSCHIG00000010452	CNOT1	100	97.646	Capra_hircus
ENSTGUG00000005919	CNOT1	100	97.688	ENSTSYG00000006888	CNOT1	100	97.688	Carlito_syrichta
ENSTGUG00000005919	CNOT1	100	93.359	ENSCPOG00000013026	CNOT1	100	93.359	Cavia_porcellus
ENSTGUG00000005919	CNOT1	100	96.007	ENSCCAG00000026333	CNOT1	100	96.007	Cebus_capucinus
ENSTGUG00000005919	CNOT1	100	97.604	ENSCATG00000032625	CNOT1	100	97.604	Cercocebus_atys
ENSTGUG00000005919	CNOT1	100	97.604	ENSCLAG00000006289	CNOT1	100	97.604	Chinchilla_lanigera
ENSTGUG00000005919	CNOT1	100	97.604	ENSCSAG00000004731	CNOT1	100	97.604	Chlorocebus_sabaeus
ENSTGUG00000005919	CNOT1	78	100.000	ENSCHOG00000009712	CNOT1	80	100.000	Choloepus_hoffmanni
ENSTGUG00000005919	CNOT1	98	95.957	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSTGUG00000005919	CNOT1	100	58.965	ENSCING00000009149	-	100	58.838	Ciona_intestinalis
ENSTGUG00000005919	CNOT1	89	63.020	ENSCSAVG00000002414	-	99	63.153	Ciona_savignyi
ENSTGUG00000005919	CNOT1	100	95.534	ENSCANG00000040534	CNOT1	100	95.534	Colobus_angolensis_palliatus
ENSTGUG00000005919	CNOT1	100	97.268	ENSCGRG00001016365	Cnot1	100	97.268	Cricetulus_griseus_chok1gshd
ENSTGUG00000005919	CNOT1	100	97.268	ENSCGRG00000001714	Cnot1	100	97.268	Cricetulus_griseus_crigri
ENSTGUG00000005919	CNOT1	100	83.083	ENSCVAG00000018930	cnot1	100	82.916	Cyprinodon_variegatus
ENSTGUG00000005919	CNOT1	100	89.828	ENSDARG00000004174	cnot1	100	89.577	Danio_rerio
ENSTGUG00000005919	CNOT1	100	95.126	ENSDNOG00000013250	CNOT1	100	95.126	Dasypus_novemcinctus
ENSTGUG00000005919	CNOT1	99	45.927	FBgn0085436	Not1	99	47.970	Drosophila_melanogaster
ENSTGUG00000005919	CNOT1	84	97.289	ENSETEG00000012806	CNOT1	84	97.289	Echinops_telfairi
ENSTGUG00000005919	CNOT1	81	77.130	ENSEBUG00000011534	cnot1	95	77.130	Eptatretus_burgeri
ENSTGUG00000005919	CNOT1	97	97.778	ENSEASG00005005819	CNOT1	100	98.750	Equus_asinus_asinus
ENSTGUG00000005919	CNOT1	100	97.688	ENSECAG00000009889	CNOT1	100	97.688	Equus_caballus
ENSTGUG00000005919	CNOT1	90	97.107	ENSEEUG00000006015	CNOT1	90	97.107	Erinaceus_europaeus
ENSTGUG00000005919	CNOT1	100	89.541	ENSELUG00000014085	cnot1	100	89.298	Esox_lucius
ENSTGUG00000005919	CNOT1	100	97.402	ENSFCAG00000025155	CNOT1	100	97.402	Felis_catus
ENSTGUG00000005919	CNOT1	100	99.622	ENSFALG00000007285	CNOT1	100	99.622	Ficedula_albicollis
ENSTGUG00000005919	CNOT1	100	97.562	ENSFDAG00000013399	CNOT1	100	97.562	Fukomys_damarensis
ENSTGUG00000005919	CNOT1	100	90.101	ENSFHEG00000020574	cnot1	100	90.059	Fundulus_heteroclitus
ENSTGUG00000005919	CNOT1	91	89.002	ENSGMOG00000012864	cnot1	100	89.325	Gadus_morhua
ENSTGUG00000005919	CNOT1	100	99.117	ENSGALG00000002301	CNOT1	100	99.117	Gallus_gallus
ENSTGUG00000005919	CNOT1	100	88.763	ENSGAFG00000015005	cnot1	100	88.763	Gambusia_affinis
ENSTGUG00000005919	CNOT1	91	89.792	ENSGACG00000002606	cnot1	100	95.510	Gasterosteus_aculeatus
ENSTGUG00000005919	CNOT1	100	98.697	ENSGAGG00000022646	CNOT1	100	98.780	Gopherus_agassizii
ENSTGUG00000005919	CNOT1	100	97.520	ENSGGOG00000009547	CNOT1	100	97.520	Gorilla_gorilla
ENSTGUG00000005919	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSTGUG00000005919	CNOT1	100	97.478	ENSHGLG00000014322	CNOT1	100	97.478	Heterocephalus_glaber_female
ENSTGUG00000005919	CNOT1	100	89.144	ENSHCOG00000006501	cnot1	100	89.436	Hippocampus_comes
ENSTGUG00000005919	CNOT1	100	88.437	ENSIPUG00000011915	cnot1	100	88.898	Ictalurus_punctatus
ENSTGUG00000005919	CNOT1	100	97.604	ENSSTOG00000005490	CNOT1	100	97.604	Ictidomys_tridecemlineatus
ENSTGUG00000005919	CNOT1	100	96.974	ENSJJAG00000000633	Cnot1	100	96.974	Jaculus_jaculus
ENSTGUG00000005919	CNOT1	100	89.887	ENSKMAG00000006149	cnot1	100	89.971	Kryptolebias_marmoratus
ENSTGUG00000005919	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSTGUG00000005919	CNOT1	100	94.914	ENSLACG00000010869	CNOT1	100	94.914	Latimeria_chalumnae
ENSTGUG00000005919	CNOT1	100	92.711	ENSLOCG00000006324	cnot1	100	92.711	Lepisosteus_oculatus
ENSTGUG00000005919	CNOT1	100	97.438	ENSLAFG00000000098	CNOT1	100	97.438	Loxodonta_africana
ENSTGUG00000005919	CNOT1	100	97.352	ENSMFAG00000035888	CNOT1	100	97.352	Macaca_fascicularis
ENSTGUG00000005919	CNOT1	100	97.562	ENSMMUG00000014625	CNOT1	100	97.562	Macaca_mulatta
ENSTGUG00000005919	CNOT1	100	94.803	ENSMNEG00000031820	CNOT1	100	97.528	Macaca_nemestrina
ENSTGUG00000005919	CNOT1	100	96.175	ENSMLEG00000040933	CNOT1	100	96.175	Mandrillus_leucophaeus
ENSTGUG00000005919	CNOT1	100	88.894	ENSMAMG00000016524	cnot1	100	88.973	Mastacembelus_armatus
ENSTGUG00000005919	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSTGUG00000005919	CNOT1	100	98.949	ENSMGAG00000001908	CNOT1	100	98.949	Meleagris_gallopavo
ENSTGUG00000005919	CNOT1	100	97.478	ENSMICG00000007071	CNOT1	100	97.478	Microcebus_murinus
ENSTGUG00000005919	CNOT1	100	97.310	ENSMOCG00000017969	Cnot1	100	97.310	Microtus_ochrogaster
ENSTGUG00000005919	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSTGUG00000005919	CNOT1	100	97.605	ENSMODG00000014199	CNOT1	100	97.605	Monodelphis_domestica
ENSTGUG00000005919	CNOT1	100	90.059	ENSMALG00000008645	cnot1	100	90.101	Monopterus_albus
ENSTGUG00000005919	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSTGUG00000005919	CNOT1	100	97.352	ENSMUSG00000036550	Cnot1	100	97.352	Mus_musculus
ENSTGUG00000005919	CNOT1	100	97.310	MGP_PahariEiJ_G0023028	Cnot1	100	97.310	Mus_pahari
ENSTGUG00000005919	CNOT1	100	97.352	MGP_SPRETEiJ_G0032549	Cnot1	100	97.352	Mus_spretus
ENSTGUG00000005919	CNOT1	100	97.688	ENSMPUG00000004830	CNOT1	100	97.688	Mustela_putorius_furo
ENSTGUG00000005919	CNOT1	100	97.142	ENSMLUG00000003728	CNOT1	100	97.142	Myotis_lucifugus
ENSTGUG00000005919	CNOT1	100	97.604	ENSNGAG00000018628	Cnot1	100	97.604	Nannospalax_galili
ENSTGUG00000005919	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSTGUG00000005919	CNOT1	100	97.562	ENSNLEG00000003566	CNOT1	100	97.562	Nomascus_leucogenys
ENSTGUG00000005919	CNOT1	87	96.868	ENSMEUG00000006145	CNOT1	88	96.868	Notamacropus_eugenii
ENSTGUG00000005919	CNOT1	83	100.000	ENSOPRG00000005604	CNOT1	83	100.000	Ochotona_princeps
ENSTGUG00000005919	CNOT1	100	97.520	ENSODEG00000016337	CNOT1	100	97.520	Octodon_degus
ENSTGUG00000005919	CNOT1	100	90.255	ENSONIG00000007358	cnot1	100	90.171	Oreochromis_niloticus
ENSTGUG00000005919	CNOT1	91	97.539	ENSOANG00000012109	CNOT1	100	97.887	Ornithorhynchus_anatinus
ENSTGUG00000005919	CNOT1	100	97.604	ENSOCUG00000006911	CNOT1	100	97.604	Oryctolagus_cuniculus
ENSTGUG00000005919	CNOT1	100	89.992	ENSORLG00000013734	cnot1	100	90.075	Oryzias_latipes
ENSTGUG00000005919	CNOT1	100	88.465	ENSORLG00020017012	cnot1	100	88.339	Oryzias_latipes_hni
ENSTGUG00000005919	CNOT1	100	88.381	ENSORLG00015007091	cnot1	100	88.087	Oryzias_latipes_hsok
ENSTGUG00000005919	CNOT1	100	87.427	ENSOMEG00000015124	cnot1	100	88.097	Oryzias_melastigma
ENSTGUG00000005919	CNOT1	100	97.520	ENSOGAG00000000543	CNOT1	100	97.520	Otolemur_garnettii
ENSTGUG00000005919	CNOT1	100	97.646	ENSOARG00000001567	CNOT1	100	97.646	Ovis_aries
ENSTGUG00000005919	CNOT1	100	97.562	ENSPPAG00000022013	CNOT1	100	97.562	Pan_paniscus
ENSTGUG00000005919	CNOT1	100	97.688	ENSPPRG00000004867	CNOT1	100	97.688	Panthera_pardus
ENSTGUG00000005919	CNOT1	100	97.688	ENSPTIG00000012589	CNOT1	100	97.688	Panthera_tigris_altaica
ENSTGUG00000005919	CNOT1	100	97.276	ENSPTRG00000008183	CNOT1	100	97.276	Pan_troglodytes
ENSTGUG00000005919	CNOT1	100	94.640	ENSPANG00000020901	CNOT1	100	94.640	Papio_anubis
ENSTGUG00000005919	CNOT1	100	91.911	ENSPKIG00000023538	CNOT1	100	91.911	Paramormyrops_kingsleyae
ENSTGUG00000005919	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSTGUG00000005919	CNOT1	100	98.571	ENSPSIG00000005499	CNOT1	100	98.571	Pelodiscus_sinensis
ENSTGUG00000005919	CNOT1	100	80.729	ENSPMAG00000009381	cnot1	100	80.671	Petromyzon_marinus
ENSTGUG00000005919	CNOT1	100	96.333	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSTGUG00000005919	CNOT1	99	89.400	ENSPFOG00000003497	cnot1	100	89.485	Poecilia_formosa
ENSTGUG00000005919	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSTGUG00000005919	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSTGUG00000005919	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSTGUG00000005919	CNOT1	100	97.520	ENSPPYG00000007410	CNOT1	100	97.520	Pongo_abelii
ENSTGUG00000005919	CNOT1	90	95.157	ENSPCAG00000003241	CNOT1	90	95.157	Procavia_capensis
ENSTGUG00000005919	CNOT1	100	97.234	ENSPCOG00000027139	CNOT1	100	97.234	Propithecus_coquereli
ENSTGUG00000005919	CNOT1	100	95.040	ENSPVAG00000004243	CNOT1	100	95.040	Pteropus_vampyrus
ENSTGUG00000005919	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSTGUG00000005919	CNOT1	100	89.496	ENSPNAG00000000246	cnot1	100	89.916	Pygocentrus_nattereri
ENSTGUG00000005919	CNOT1	100	97.268	ENSRNOG00000012271	Cnot1	100	97.268	Rattus_norvegicus
ENSTGUG00000005919	CNOT1	100	95.348	ENSRBIG00000044598	CNOT1	100	95.348	Rhinopithecus_bieti
ENSTGUG00000005919	CNOT1	100	97.604	ENSRROG00000000906	CNOT1	100	97.604	Rhinopithecus_roxellana
ENSTGUG00000005919	CNOT1	56	30.392	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSTGUG00000005919	CNOT1	100	93.144	ENSSBOG00000029155	CNOT1	100	93.144	Saimiri_boliviensis_boliviensis
ENSTGUG00000005919	CNOT1	100	97.606	ENSSHAG00000012187	CNOT1	100	97.606	Sarcophilus_harrisii
ENSTGUG00000005919	CNOT1	100	90.201	ENSSFOG00015017614	cnot1	100	90.201	Scleropages_formosus
ENSTGUG00000005919	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSTGUG00000005919	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSTGUG00000005919	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSTGUG00000005919	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSTGUG00000005919	CNOT1	100	90.151	ENSSPAG00000018802	cnot1	100	89.899	Stegastes_partitus
ENSTGUG00000005919	CNOT1	100	97.562	ENSSSCG00000002799	CNOT1	100	98.611	Sus_scrofa
ENSTGUG00000005919	CNOT1	100	88.250	ENSTNIG00000018706	cnot1	100	88.333	Tetraodon_nigroviridis
ENSTGUG00000005919	CNOT1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSTGUG00000005919	CNOT1	95	97.382	ENSTTRG00000008460	CNOT1	95	97.382	Tursiops_truncatus
ENSTGUG00000005919	CNOT1	100	97.688	ENSUAMG00000009251	CNOT1	100	97.688	Ursus_americanus
ENSTGUG00000005919	CNOT1	100	97.688	ENSUMAG00000021291	CNOT1	100	97.688	Ursus_maritimus
ENSTGUG00000005919	CNOT1	97	95.336	ENSVPAG00000008846	CNOT1	97	95.336	Vicugna_pacos
ENSTGUG00000005919	CNOT1	100	96.566	ENSVVUG00000024037	CNOT1	100	96.585	Vulpes_vulpes
ENSTGUG00000005919	CNOT1	100	90.105	ENSXETG00000015900	cnot1	100	89.895	Xenopus_tropicalis
ENSTGUG00000005919	CNOT1	100	88.931	ENSXCOG00000013552	cnot1	100	88.931	Xiphophorus_couchianus
ENSTGUG00000005919	CNOT1	100	88.973	ENSXMAG00000006031	cnot1	100	88.973	Xiphophorus_maculatus