EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000005926 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 17245 bases
Position: chr1:4619711-4636955
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006103	Nop52	PF05997.12	1.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006162	RRP1B-201	2133	-	ENSTGUP00000006103	710 (aa)	-	H0Z6A5

Gene Model

Click here to download ENSTGUG00000005926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000005926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000005926	RRP1B	63	59.692	ENSAMEG00000011401	RRP1B	61	60.450	Ailuropoda_melanoleuca
ENSTGUG00000005926	RRP1B	54	51.316	ENSAOCG00000017894	-	89	51.579	Amphiprion_ocellaris
ENSTGUG00000005926	RRP1B	100	74.930	ENSAPLG00000004310	RRP1B	100	74.930	Anas_platyrhynchos
ENSTGUG00000005926	RRP1B	100	51.385	ENSACAG00000017851	RRP1B	90	51.452	Anolis_carolinensis
ENSTGUG00000005926	RRP1B	100	44.399	ENSBTAG00000017418	RRP1B	94	44.567	Bos_taurus
ENSTGUG00000005926	RRP1B	100	44.321	ENSCAFG00000010621	RRP1B	99	44.049	Canis_familiaris
ENSTGUG00000005926	RRP1B	100	44.582	ENSCAFG00020018901	RRP1B	94	44.414	Canis_lupus_dingo
ENSTGUG00000005926	RRP1B	100	44.890	ENSCHIG00000021519	RRP1B	94	45.144	Capra_hircus
ENSTGUG00000005926	RRP1B	55	46.098	ENSCPOG00000038986	RRP1	67	52.273	Cavia_porcellus
ENSTGUG00000005926	RRP1B	51	52.304	ENSCCAG00000029828	RRP1	65	57.616	Cebus_capucinus
ENSTGUG00000005926	RRP1B	52	47.467	ENSCLAG00000011639	RRP1	67	52.769	Chinchilla_lanigera
ENSTGUG00000005926	RRP1B	100	64.106	ENSCPBG00000010310	RRP1B	98	63.966	Chrysemys_picta_bellii
ENSTGUG00000005926	RRP1B	55	31.343	ENSCING00000003304	-	66	32.588	Ciona_intestinalis
ENSTGUG00000005926	RRP1B	100	43.725	ENSCGRG00001010889	-	94	43.593	Cricetulus_griseus_chok1gshd
ENSTGUG00000005926	RRP1B	100	43.725	ENSCGRG00001023882	-	94	43.593	Cricetulus_griseus_chok1gshd
ENSTGUG00000005926	RRP1B	100	43.725	ENSCGRG00000001553	Rrp1b	97	43.593	Cricetulus_griseus_crigri
ENSTGUG00000005926	RRP1B	55	59.302	ENSCSEG00000020711	-	73	53.704	Cynoglossus_semilaevis
ENSTGUG00000005926	RRP1B	56	51.351	ENSDNOG00000019880	RRP1	67	59.866	Dasypus_novemcinctus
ENSTGUG00000005926	RRP1B	74	54.167	ENSETEG00000019489	RRP1B	52	71.264	Echinops_telfairi
ENSTGUG00000005926	RRP1B	100	47.397	ENSEASG00005001687	RRP1B	94	47.268	Equus_asinus_asinus
ENSTGUG00000005926	RRP1B	100	46.986	ENSECAG00000018018	RRP1B	94	47.131	Equus_caballus
ENSTGUG00000005926	RRP1B	61	52.066	ENSELUG00000015885	-	77	49.470	Esox_lucius
ENSTGUG00000005926	RRP1B	97	91.092	ENSFALG00000002024	RRP1B	100	89.943	Ficedula_albicollis
ENSTGUG00000005926	RRP1B	58	50.538	ENSGMOG00000001953	-	62	50.538	Gadus_morhua
ENSTGUG00000005926	RRP1B	100	73.174	ENSGALG00000035696	RRP1B	94	73.174	Gallus_gallus
ENSTGUG00000005926	RRP1B	67	49.371	ENSGACG00000001438	rrp1	70	49.191	Gasterosteus_aculeatus
ENSTGUG00000005926	RRP1B	100	62.849	ENSGAGG00000000375	RRP1B	94	62.570	Gopherus_agassizii
ENSTGUG00000005926	RRP1B	81	48.011	ENSHGLG00100002232	RRP1B	78	45.957	Heterocephalus_glaber_male
ENSTGUG00000005926	RRP1B	63	44.667	ENSHCOG00000018388	-	56	44.667	Hippocampus_comes
ENSTGUG00000005926	RRP1B	59	49.387	ENSIPUG00000000673	-	63	49.541	Ictalurus_punctatus
ENSTGUG00000005926	RRP1B	52	52.957	ENSSTOG00000011116	RRP1	68	58.249	Ictidomys_tridecemlineatus
ENSTGUG00000005926	RRP1B	61	49.191	ENSKMAG00000005539	rrp1	70	49.383	Kryptolebias_marmoratus
ENSTGUG00000005926	RRP1B	93	43.440	ENSLAFG00000000766	RRP1B	73	60.897	Loxodonta_africana
ENSTGUG00000005926	RRP1B	100	73.455	ENSMGAG00000014591	RRP1B	94	73.034	Meleagris_gallopavo
ENSTGUG00000005926	RRP1B	54	60.099	MGP_CAROLIEiJ_G0015508	Rrp1	54	60.396	Mus_caroli
ENSTGUG00000005926	RRP1B	54	60.099	ENSMUSG00000061032	Rrp1	54	60.396	Mus_musculus
ENSTGUG00000005926	RRP1B	51	60.396	MGP_PahariEiJ_G0030921	Rrp1	54	60.396	Mus_pahari
ENSTGUG00000005926	RRP1B	51	60.099	MGP_SPRETEiJ_G0016321	Rrp1	54	60.396	Mus_spretus
ENSTGUG00000005926	RRP1B	89	41.049	ENSMPUG00000009810	RRP1B	99	41.033	Mustela_putorius_furo
ENSTGUG00000005926	RRP1B	69	81.579	ENSMEUG00000003226	-	79	81.579	Notamacropus_eugenii
ENSTGUG00000005926	RRP1B	74	52.759	ENSODEG00000013177	RRP1B	73	52.759	Octodon_degus
ENSTGUG00000005926	RRP1B	74	52.203	ENSOCUG00000025931	RRP1B	62	62.406	Oryctolagus_cuniculus
ENSTGUG00000005926	RRP1B	65	49.235	ENSORLG00020007199	-	54	50.152	Oryzias_latipes_hni
ENSTGUG00000005926	RRP1B	65	48.308	ENSORLG00015004425	-	54	49.849	Oryzias_latipes_hsok
ENSTGUG00000005926	RRP1B	59	60.870	ENSOGAG00000009872	RRP1B	65	60.870	Otolemur_garnettii
ENSTGUG00000005926	RRP1B	100	43.785	ENSOARG00000011314	RRP1B	100	44.049	Ovis_aries
ENSTGUG00000005926	RRP1B	67	57.246	ENSPTIG00000016894	RRP1B	75	57.246	Panthera_tigris_altaica
ENSTGUG00000005926	RRP1B	100	62.709	ENSPSIG00000008152	RRP1B	90	61.964	Pelodiscus_sinensis
ENSTGUG00000005926	RRP1B	69	46.792	ENSPCIG00000015523	-	65	61.589	Phascolarctos_cinereus
ENSTGUG00000005926	RRP1B	100	46.622	ENSPCOG00000017927	RRP1B	94	46.467	Propithecus_coquereli
ENSTGUG00000005926	RRP1B	62	50.588	ENSSMAG00000016847	-	79	48.649	Scophthalmus_maximus
ENSTGUG00000005926	RRP1B	58	53.763	ENSSARG00000003108	-	62	53.676	Sorex_araneus
ENSTGUG00000005926	RRP1B	100	55.830	ENSSPUG00000002834	RRP1B	94	55.464	Sphenodon_punctatus
ENSTGUG00000005926	RRP1B	68	43.200	ENSSPAG00000005370	-	51	46.847	Stegastes_partitus
ENSTGUG00000005926	RRP1B	63	52.615	ENSSSCG00000021698	RRP1B	99	41.088	Sus_scrofa
ENSTGUG00000005926	RRP1B	59	49.026	ENSTNIG00000005053	rrp1	66	49.201	Tetraodon_nigroviridis
ENSTGUG00000005926	RRP1B	79	57.658	ENSTBEG00000000422	RRP1B	94	59.677	Tupaia_belangeri
ENSTGUG00000005926	RRP1B	100	43.352	ENSTTRG00000000723	RRP1B	94	43.508	Tursiops_truncatus
ENSTGUG00000005926	RRP1B	100	45.090	ENSUAMG00000026765	RRP1B	92	59.807	Ursus_americanus
ENSTGUG00000005926	RRP1B	64	59.091	ENSUMAG00000025510	RRP1B	86	59.164	Ursus_maritimus
ENSTGUG00000005926	RRP1B	100	44.596	ENSVVUG00000024509	RRP1B	99	43.989	Vulpes_vulpes
ENSTGUG00000005926	RRP1B	59	53.287	ENSXETG00000013683	rrp1b	61	52.941	Xenopus_tropicalis
ENSTGUG00000005926	RRP1B	71	46.526	ENSXMAG00000023123	-	54	47.222	Xiphophorus_maculatus