EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000006082 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 27603 bases
Position: chr11:5580893-5608495
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006282	CPSF_A	PF03178.15	1.9e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006345	SF3B3-201	3962	-	ENSTGUP00000006282	1218 (aa)	-	H0Z6T3

Gene Model

Click here to download ENSTGUG00000006082's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006082	SF3B3	100	99.097	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSTGUG00000006082	SF3B3	96	93.259	ENSAPOG00000006172	sf3b3	98	93.259	Acanthochromis_polyacanthus
ENSTGUG00000006082	SF3B3	100	98.935	ENSAMEG00000002187	SF3B3	100	98.935	Ailuropoda_melanoleuca
ENSTGUG00000006082	SF3B3	92	90.544	ENSACIG00000016487	sf3b3	100	90.544	Amphilophus_citrinellus
ENSTGUG00000006082	SF3B3	100	93.268	ENSAOCG00000007158	sf3b3	100	93.268	Amphiprion_ocellaris
ENSTGUG00000006082	SF3B3	100	93.268	ENSAPEG00000022786	sf3b3	100	93.268	Amphiprion_percula
ENSTGUG00000006082	SF3B3	100	93.432	ENSATEG00000013708	sf3b3	100	93.432	Anabas_testudineus
ENSTGUG00000006082	SF3B3	81	98.577	ENSAPLG00000004996	SF3B3	99	98.577	Anas_platyrhynchos
ENSTGUG00000006082	SF3B3	100	98.768	ENSACAG00000001817	SF3B3	100	98.768	Anolis_carolinensis
ENSTGUG00000006082	SF3B3	100	99.097	ENSANAG00000028001	SF3B3	100	99.097	Aotus_nancymaae
ENSTGUG00000006082	SF3B3	96	93.003	ENSACLG00000022555	sf3b3	98	93.003	Astatotilapia_calliptera
ENSTGUG00000006082	SF3B3	100	93.103	ENSAMXG00000003410	sf3b3	100	93.103	Astyanax_mexicanus
ENSTGUG00000006082	SF3B3	100	99.097	ENSBTAG00000010627	SF3B3	100	99.097	Bos_taurus
ENSTGUG00000006082	SF3B3	100	60.488	WBGene00019323	teg-4	100	60.488	Caenorhabditis_elegans
ENSTGUG00000006082	SF3B3	100	99.097	ENSCJAG00000014773	SF3B3	99	99.097	Callithrix_jacchus
ENSTGUG00000006082	SF3B3	100	99.179	ENSCAFG00000020151	SF3B3	100	99.179	Canis_familiaris
ENSTGUG00000006082	SF3B3	100	99.179	ENSCAFG00020020912	SF3B3	100	99.179	Canis_lupus_dingo
ENSTGUG00000006082	SF3B3	100	99.179	ENSCHIG00000019822	SF3B3	100	99.179	Capra_hircus
ENSTGUG00000006082	SF3B3	100	99.097	ENSTSYG00000007910	SF3B3	100	99.097	Carlito_syrichta
ENSTGUG00000006082	SF3B3	84	88.128	ENSCAPG00000001484	SF3B3	92	88.128	Cavia_aperea
ENSTGUG00000006082	SF3B3	100	97.783	ENSCPOG00000000586	SF3B3	100	97.783	Cavia_porcellus
ENSTGUG00000006082	SF3B3	100	99.097	ENSCCAG00000017736	SF3B3	100	99.097	Cebus_capucinus
ENSTGUG00000006082	SF3B3	100	99.097	ENSCATG00000036562	SF3B3	100	99.097	Cercocebus_atys
ENSTGUG00000006082	SF3B3	100	99.097	ENSCLAG00000003921	SF3B3	100	99.097	Chinchilla_lanigera
ENSTGUG00000006082	SF3B3	100	99.179	ENSCSAG00000004371	SF3B3	100	99.179	Chlorocebus_sabaeus
ENSTGUG00000006082	SF3B3	90	92.212	ENSCHOG00000001878	SF3B3	90	92.212	Choloepus_hoffmanni
ENSTGUG00000006082	SF3B3	100	98.276	ENSCPBG00000015853	SF3B3	100	98.276	Chrysemys_picta_bellii
ENSTGUG00000006082	SF3B3	100	80.968	ENSCING00000001342	-	100	80.968	Ciona_intestinalis
ENSTGUG00000006082	SF3B3	99	79.409	ENSCSAVG00000011454	-	100	79.409	Ciona_savignyi
ENSTGUG00000006082	SF3B3	100	95.977	ENSCANG00000042920	SF3B3	100	95.977	Colobus_angolensis_palliatus
ENSTGUG00000006082	SF3B3	100	99.015	ENSCGRG00001015908	Sf3b3	100	99.015	Cricetulus_griseus_chok1gshd
ENSTGUG00000006082	SF3B3	100	99.015	ENSCGRG00000010180	Sf3b3	100	99.015	Cricetulus_griseus_crigri
ENSTGUG00000006082	SF3B3	82	92.323	ENSCSEG00000014192	sf3b3	99	92.323	Cynoglossus_semilaevis
ENSTGUG00000006082	SF3B3	100	92.611	ENSCVAG00000010459	sf3b3	100	92.611	Cyprinodon_variegatus
ENSTGUG00000006082	SF3B3	100	93.186	ENSDARG00000103553	sf3b3	100	93.186	Danio_rerio
ENSTGUG00000006082	SF3B3	85	99.133	ENSDNOG00000043626	SF3B3	100	99.133	Dasypus_novemcinctus
ENSTGUG00000006082	SF3B3	100	99.097	ENSDORG00000014176	Sf3b3	100	99.097	Dipodomys_ordii
ENSTGUG00000006082	SF3B3	100	75.407	FBgn0035162	Sf3b3	100	75.407	Drosophila_melanogaster
ENSTGUG00000006082	SF3B3	84	99.156	ENSETEG00000002729	SF3B3	84	99.156	Echinops_telfairi
ENSTGUG00000006082	SF3B3	100	87.849	ENSEBUG00000006117	sf3b3	100	87.849	Eptatretus_burgeri
ENSTGUG00000006082	SF3B3	100	99.179	ENSEASG00005013376	SF3B3	100	99.179	Equus_asinus_asinus
ENSTGUG00000006082	SF3B3	100	99.179	ENSECAG00000014053	SF3B3	100	99.179	Equus_caballus
ENSTGUG00000006082	SF3B3	93	99.109	ENSEEUG00000015611	SF3B3	93	99.109	Erinaceus_europaeus
ENSTGUG00000006082	SF3B3	100	91.155	ENSELUG00000015417	sf3b3	100	91.155	Esox_lucius
ENSTGUG00000006082	SF3B3	100	99.179	ENSFCAG00000009487	SF3B3	100	99.179	Felis_catus
ENSTGUG00000006082	SF3B3	100	99.672	ENSFALG00000007372	SF3B3	100	99.672	Ficedula_albicollis
ENSTGUG00000006082	SF3B3	100	99.179	ENSFDAG00000002608	SF3B3	100	99.179	Fukomys_damarensis
ENSTGUG00000006082	SF3B3	100	93.021	ENSFHEG00000017824	sf3b3	100	93.021	Fundulus_heteroclitus
ENSTGUG00000006082	SF3B3	100	89.336	ENSGMOG00000008139	sf3b3	100	89.336	Gadus_morhua
ENSTGUG00000006082	SF3B3	100	99.672	ENSGALG00000002531	SF3B3	100	99.672	Gallus_gallus
ENSTGUG00000006082	SF3B3	100	92.611	ENSGAFG00000015206	sf3b3	100	92.611	Gambusia_affinis
ENSTGUG00000006082	SF3B3	100	92.945	ENSGACG00000002646	sf3b3	100	92.945	Gasterosteus_aculeatus
ENSTGUG00000006082	SF3B3	96	98.379	ENSGAGG00000006746	SF3B3	97	98.379	Gopherus_agassizii
ENSTGUG00000006082	SF3B3	100	99.097	ENSGGOG00000003246	SF3B3	100	99.097	Gorilla_gorilla
ENSTGUG00000006082	SF3B3	92	85.638	ENSHBUG00000005960	sf3b3	100	86.798	Haplochromis_burtoni
ENSTGUG00000006082	SF3B3	100	99.097	ENSHGLG00000010135	SF3B3	100	99.097	Heterocephalus_glaber_female
ENSTGUG00000006082	SF3B3	100	96.921	ENSHGLG00100011148	SF3B3	100	96.921	Heterocephalus_glaber_male
ENSTGUG00000006082	SF3B3	100	92.447	ENSHCOG00000011981	sf3b3	100	92.447	Hippocampus_comes
ENSTGUG00000006082	SF3B3	100	93.021	ENSIPUG00000020435	sf3b3	100	93.021	Ictalurus_punctatus
ENSTGUG00000006082	SF3B3	100	99.097	ENSSTOG00000007065	SF3B3	100	99.097	Ictidomys_tridecemlineatus
ENSTGUG00000006082	SF3B3	100	99.097	ENSJJAG00000003948	Sf3b3	100	99.097	Jaculus_jaculus
ENSTGUG00000006082	SF3B3	100	90.805	ENSKMAG00000004066	sf3b3	99	92.918	Kryptolebias_marmoratus
ENSTGUG00000006082	SF3B3	100	92.857	ENSLBEG00000018302	sf3b3	100	92.857	Labrus_bergylta
ENSTGUG00000006082	SF3B3	98	92.033	ENSLACG00000012501	SF3B3	99	92.033	Latimeria_chalumnae
ENSTGUG00000006082	SF3B3	100	93.683	ENSLOCG00000007566	sf3b3	100	93.683	Lepisosteus_oculatus
ENSTGUG00000006082	SF3B3	100	99.179	ENSLAFG00000012219	SF3B3	100	99.179	Loxodonta_africana
ENSTGUG00000006082	SF3B3	100	99.097	ENSMFAG00000045487	SF3B3	100	99.097	Macaca_fascicularis
ENSTGUG00000006082	SF3B3	100	99.097	ENSMMUG00000017812	SF3B3	100	99.097	Macaca_mulatta
ENSTGUG00000006082	SF3B3	100	99.097	ENSMNEG00000033385	SF3B3	100	99.097	Macaca_nemestrina
ENSTGUG00000006082	SF3B3	100	95.567	ENSMLEG00000043891	SF3B3	100	95.567	Mandrillus_leucophaeus
ENSTGUG00000006082	SF3B3	100	93.432	ENSMAMG00000016837	sf3b3	100	93.432	Mastacembelus_armatus
ENSTGUG00000006082	SF3B3	89	90.296	ENSMZEG00005026015	sf3b3	99	90.296	Maylandia_zebra
ENSTGUG00000006082	SF3B3	100	93.021	ENSMZEG00005010836	sf3b3	100	93.021	Maylandia_zebra
ENSTGUG00000006082	SF3B3	100	99.672	ENSMGAG00000001597	SF3B3	100	99.672	Meleagris_gallopavo
ENSTGUG00000006082	SF3B3	81	82.888	ENSMAUG00000013618	Sf3b3	95	82.888	Mesocricetus_auratus
ENSTGUG00000006082	SF3B3	100	97.951	ENSMICG00000001363	SF3B3	100	97.951	Microcebus_murinus
ENSTGUG00000006082	SF3B3	100	99.015	ENSMOCG00000006108	Sf3b3	100	99.015	Microtus_ochrogaster
ENSTGUG00000006082	SF3B3	89	90.573	ENSMMOG00000002598	sf3b3	97	90.573	Mola_mola
ENSTGUG00000006082	SF3B3	100	94.750	ENSMODG00000014363	SF3B3	100	94.750	Monodelphis_domestica
ENSTGUG00000006082	SF3B3	100	93.103	ENSMALG00000008014	sf3b3	100	93.103	Monopterus_albus
ENSTGUG00000006082	SF3B3	100	98.933	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.933	Mus_caroli
ENSTGUG00000006082	SF3B3	100	99.015	ENSMUSG00000033732	Sf3b3	100	99.015	Mus_musculus
ENSTGUG00000006082	SF3B3	100	98.933	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.933	Mus_spretus
ENSTGUG00000006082	SF3B3	100	99.179	ENSMPUG00000010277	SF3B3	100	99.179	Mustela_putorius_furo
ENSTGUG00000006082	SF3B3	100	98.933	ENSMLUG00000014607	SF3B3	100	98.933	Myotis_lucifugus
ENSTGUG00000006082	SF3B3	100	99.097	ENSNGAG00000021903	Sf3b3	100	99.097	Nannospalax_galili
ENSTGUG00000006082	SF3B3	83	91.667	ENSNBRG00000007197	sf3b3	99	91.667	Neolamprologus_brichardi
ENSTGUG00000006082	SF3B3	100	97.621	ENSNLEG00000016127	SF3B3	100	97.621	Nomascus_leucogenys
ENSTGUG00000006082	SF3B3	92	98.158	ENSMEUG00000004479	SF3B3	94	98.158	Notamacropus_eugenii
ENSTGUG00000006082	SF3B3	98	95.812	ENSOPRG00000009847	SF3B3	100	95.812	Ochotona_princeps
ENSTGUG00000006082	SF3B3	100	99.179	ENSODEG00000014154	SF3B3	100	99.179	Octodon_degus
ENSTGUG00000006082	SF3B3	100	93.268	ENSONIG00000011198	sf3b3	100	93.268	Oreochromis_niloticus
ENSTGUG00000006082	SF3B3	100	99.097	ENSOANG00000001161	-	100	99.097	Ornithorhynchus_anatinus
ENSTGUG00000006082	SF3B3	100	96.798	ENSOCUG00000004139	SF3B3	100	96.798	Oryctolagus_cuniculus
ENSTGUG00000006082	SF3B3	100	93.268	ENSORLG00000013472	sf3b3	100	93.268	Oryzias_latipes
ENSTGUG00000006082	SF3B3	100	93.268	ENSORLG00020017473	sf3b3	100	93.268	Oryzias_latipes_hni
ENSTGUG00000006082	SF3B3	100	93.268	ENSORLG00015007710	sf3b3	100	93.268	Oryzias_latipes_hsok
ENSTGUG00000006082	SF3B3	100	93.103	ENSOMEG00000014483	sf3b3	100	93.103	Oryzias_melastigma
ENSTGUG00000006082	SF3B3	100	98.853	ENSOGAG00000016051	SF3B3	100	98.853	Otolemur_garnettii
ENSTGUG00000006082	SF3B3	100	98.935	ENSOARG00000004816	SF3B3	100	98.935	Ovis_aries
ENSTGUG00000006082	SF3B3	100	99.097	ENSPPAG00000026807	SF3B3	100	99.097	Pan_paniscus
ENSTGUG00000006082	SF3B3	100	99.179	ENSPPRG00000001686	SF3B3	100	99.179	Panthera_pardus
ENSTGUG00000006082	SF3B3	89	96.232	ENSPTIG00000020382	SF3B3	100	96.232	Panthera_tigris_altaica
ENSTGUG00000006082	SF3B3	100	99.097	ENSPTRG00000008308	SF3B3	100	99.097	Pan_troglodytes
ENSTGUG00000006082	SF3B3	100	99.097	ENSPANG00000024075	SF3B3	100	99.097	Papio_anubis
ENSTGUG00000006082	SF3B3	100	92.200	ENSPKIG00000002712	sf3b3	100	92.200	Paramormyrops_kingsleyae
ENSTGUG00000006082	SF3B3	89	98.713	ENSPSIG00000002232	SF3B3	100	98.713	Pelodiscus_sinensis
ENSTGUG00000006082	SF3B3	100	99.015	ENSPEMG00000008603	Sf3b3	100	99.015	Peromyscus_maniculatus_bairdii
ENSTGUG00000006082	SF3B3	100	91.708	ENSPMAG00000001793	sf3b3	100	91.708	Petromyzon_marinus
ENSTGUG00000006082	SF3B3	100	99.097	ENSPCIG00000014927	SF3B3	100	99.097	Phascolarctos_cinereus
ENSTGUG00000006082	SF3B3	100	92.693	ENSPFOG00000015516	sf3b3	100	92.693	Poecilia_formosa
ENSTGUG00000006082	SF3B3	100	92.693	ENSPLAG00000014330	sf3b3	100	92.693	Poecilia_latipinna
ENSTGUG00000006082	SF3B3	100	92.775	ENSPMEG00000019856	sf3b3	100	92.775	Poecilia_mexicana
ENSTGUG00000006082	SF3B3	81	93.598	ENSPREG00000019669	sf3b3	97	93.598	Poecilia_reticulata
ENSTGUG00000006082	SF3B3	95	99.027	ENSPPYG00000007539	SF3B3	100	99.027	Pongo_abelii
ENSTGUG00000006082	SF3B3	100	77.586	ENSPCAG00000002623	SF3B3	100	77.586	Procavia_capensis
ENSTGUG00000006082	SF3B3	84	99.065	ENSPCOG00000026582	SF3B3	100	99.065	Propithecus_coquereli
ENSTGUG00000006082	SF3B3	100	99.097	ENSPVAG00000000684	SF3B3	100	99.097	Pteropus_vampyrus
ENSTGUG00000006082	SF3B3	100	93.103	ENSPNYG00000003528	sf3b3	100	93.103	Pundamilia_nyererei
ENSTGUG00000006082	SF3B3	100	93.103	ENSPNAG00000015419	sf3b3	100	93.103	Pygocentrus_nattereri
ENSTGUG00000006082	SF3B3	100	99.015	ENSRNOG00000017724	Sf3b3	100	99.015	Rattus_norvegicus
ENSTGUG00000006082	SF3B3	100	99.097	ENSRBIG00000021904	SF3B3	100	99.097	Rhinopithecus_bieti
ENSTGUG00000006082	SF3B3	100	99.097	ENSRROG00000045703	SF3B3	100	99.097	Rhinopithecus_roxellana
ENSTGUG00000006082	SF3B3	100	99.097	ENSSBOG00000029156	SF3B3	100	99.097	Saimiri_boliviensis_boliviensis
ENSTGUG00000006082	SF3B3	100	99.097	ENSSHAG00000000372	SF3B3	100	99.097	Sarcophilus_harrisii
ENSTGUG00000006082	SF3B3	100	93.514	ENSSFOG00015012877	sf3b3	100	93.514	Scleropages_formosus
ENSTGUG00000006082	SF3B3	100	92.775	ENSSMAG00000014386	sf3b3	100	92.775	Scophthalmus_maximus
ENSTGUG00000006082	SF3B3	100	93.514	ENSSDUG00000021201	sf3b3	100	93.514	Seriola_dumerili
ENSTGUG00000006082	SF3B3	100	93.432	ENSSLDG00000017532	sf3b3	100	93.432	Seriola_lalandi_dorsalis
ENSTGUG00000006082	SF3B3	93	98.990	ENSSARG00000006917	SF3B3	93	98.990	Sorex_araneus
ENSTGUG00000006082	SF3B3	100	98.933	ENSSPUG00000006253	SF3B3	100	98.933	Sphenodon_punctatus
ENSTGUG00000006082	SF3B3	100	85.632	ENSSPAG00000003125	sf3b3	100	85.632	Stegastes_partitus
ENSTGUG00000006082	SF3B3	100	99.179	ENSSSCG00000025323	SF3B3	100	99.179	Sus_scrofa
ENSTGUG00000006082	SF3B3	89	92.929	ENSTNIG00000004857	sf3b3	100	92.929	Tetraodon_nigroviridis
ENSTGUG00000006082	SF3B3	93	84.081	ENSTBEG00000002946	SF3B3	100	84.081	Tupaia_belangeri
ENSTGUG00000006082	SF3B3	100	98.358	ENSTTRG00000005855	SF3B3	100	98.358	Tursiops_truncatus
ENSTGUG00000006082	SF3B3	100	99.179	ENSUAMG00000006780	SF3B3	100	99.179	Ursus_americanus
ENSTGUG00000006082	SF3B3	100	99.179	ENSUMAG00000017757	SF3B3	100	99.179	Ursus_maritimus
ENSTGUG00000006082	SF3B3	100	83.087	ENSVPAG00000003202	SF3B3	100	83.087	Vicugna_pacos
ENSTGUG00000006082	SF3B3	100	99.097	ENSVVUG00000017922	SF3B3	100	99.097	Vulpes_vulpes
ENSTGUG00000006082	SF3B3	100	96.388	ENSXETG00000032869	SF3B3	100	96.388	Xenopus_tropicalis
ENSTGUG00000006082	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSTGUG00000006082	SF3B3	100	92.693	ENSXMAG00000006334	sf3b3	99	93.801	Xiphophorus_maculatus