EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000006142 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 38582 bases
Position: chr14:8863707-8902288
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006343	Ago_hook	PF10427.9	6.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006407	TNRC6A-201	5652	-	ENSTGUP00000006343	1883 (aa)	-	H0Z6Z4

Gene Model

Click here to download ENSTGUG00000006142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000006142	TNRC6A	93	35.620	ENSTGUG00000010138	-	99	35.568
ENSTGUG00000006142	TNRC6A	90	42.575	ENSTGUG00000007733	TNRC6C	99	42.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006142	TNRC6A	100	80.135	ENSG00000090905	TNRC6A	100	93.125	Homo_sapiens
ENSTGUG00000006142	TNRC6A	97	78.281	ENSAMEG00000009333	TNRC6A	99	78.281	Ailuropoda_melanoleuca
ENSTGUG00000006142	TNRC6A	97	91.020	ENSAPLG00000009978	TNRC6A	100	90.967	Anas_platyrhynchos
ENSTGUG00000006142	TNRC6A	100	55.615	ENSACAG00000011857	TNRC6A	99	57.403	Anolis_carolinensis
ENSTGUG00000006142	TNRC6A	100	79.875	ENSANAG00000025252	TNRC6A	99	79.301	Aotus_nancymaae
ENSTGUG00000006142	TNRC6A	92	58.715	ENSAMXG00000019919	tnrc6a	99	61.702	Astyanax_mexicanus
ENSTGUG00000006142	TNRC6A	100	80.355	ENSBTAG00000017999	TNRC6A	99	80.000	Bos_taurus
ENSTGUG00000006142	TNRC6A	100	77.846	ENSCJAG00000020677	TNRC6A	99	78.143	Callithrix_jacchus
ENSTGUG00000006142	TNRC6A	100	78.466	ENSCAFG00000017531	TNRC6A	99	80.214	Canis_familiaris
ENSTGUG00000006142	TNRC6A	98	79.549	ENSCAFG00020021160	TNRC6A	99	80.120	Canis_lupus_dingo
ENSTGUG00000006142	TNRC6A	100	79.990	ENSCHIG00000019448	TNRC6A	99	79.624	Capra_hircus
ENSTGUG00000006142	TNRC6A	100	80.042	ENSTSYG00000012711	TNRC6A	99	79.416	Carlito_syrichta
ENSTGUG00000006142	TNRC6A	99	80.660	ENSCPOG00000036684	TNRC6A	100	79.874	Cavia_porcellus
ENSTGUG00000006142	TNRC6A	100	80.052	ENSCCAG00000033664	TNRC6A	99	79.479	Cebus_capucinus
ENSTGUG00000006142	TNRC6A	99	79.885	ENSCATG00000019284	TNRC6A	99	78.400	Cercocebus_atys
ENSTGUG00000006142	TNRC6A	100	77.540	ENSCLAG00000010217	TNRC6A	99	76.759	Chinchilla_lanigera
ENSTGUG00000006142	TNRC6A	100	78.173	ENSCSAG00000006561	TNRC6A	99	77.563	Chlorocebus_sabaeus
ENSTGUG00000006142	TNRC6A	95	75.577	ENSCHOG00000009374	TNRC6A	94	75.560	Choloepus_hoffmanni
ENSTGUG00000006142	TNRC6A	92	90.371	ENSCPBG00000001881	TNRC6A	99	90.371	Chrysemys_picta_bellii
ENSTGUG00000006142	TNRC6A	100	80.302	ENSCANG00000041549	TNRC6A	99	79.729	Colobus_angolensis_palliatus
ENSTGUG00000006142	TNRC6A	100	79.206	ENSCGRG00001015021	Tnrc6a	99	78.788	Cricetulus_griseus_chok1gshd
ENSTGUG00000006142	TNRC6A	99	78.747	ENSCGRG00000013351	Tnrc6a	99	78.329	Cricetulus_griseus_crigri
ENSTGUG00000006142	TNRC6A	92	58.923	ENSDARG00000079688	tnrc6a	99	58.830	Danio_rerio
ENSTGUG00000006142	TNRC6A	97	77.347	ENSDNOG00000013989	TNRC6A	99	77.242	Dasypus_novemcinctus
ENSTGUG00000006142	TNRC6A	97	71.900	ENSETEG00000014658	TNRC6A	99	72.161	Echinops_telfairi
ENSTGUG00000006142	TNRC6A	100	80.136	ENSEASG00005017693	TNRC6A	99	79.718	Equus_asinus_asinus
ENSTGUG00000006142	TNRC6A	100	77.982	ENSECAG00000025056	TNRC6A	99	80.301	Equus_caballus
ENSTGUG00000006142	TNRC6A	97	72.803	ENSEEUG00000004530	TNRC6A	99	72.855	Erinaceus_europaeus
ENSTGUG00000006142	TNRC6A	100	80.219	ENSFCAG00000025236	TNRC6A	99	79.384	Felis_catus
ENSTGUG00000006142	TNRC6A	100	93.227	ENSFALG00000003757	TNRC6A	99	93.176	Ficedula_albicollis
ENSTGUG00000006142	TNRC6A	92	92.932	ENSGALG00000006068	TNRC6A	99	93.163	Gallus_gallus
ENSTGUG00000006142	TNRC6A	92	89.486	ENSGAGG00000023209	TNRC6A	99	89.486	Gopherus_agassizii
ENSTGUG00000006142	TNRC6A	99	80.021	ENSGGOG00000005137	TNRC6A	98	80.032	Gorilla_gorilla
ENSTGUG00000006142	TNRC6A	99	78.889	ENSHGLG00000012474	-	100	78.051	Heterocephalus_glaber_female
ENSTGUG00000006142	TNRC6A	95	63.859	ENSHGLG00000007368	-	93	63.697	Heterocephalus_glaber_female
ENSTGUG00000006142	TNRC6A	99	79.609	ENSHGLG00100012496	-	100	78.922	Heterocephalus_glaber_male
ENSTGUG00000006142	TNRC6A	100	77.671	ENSSTOG00000023394	TNRC6A	99	77.013	Ictidomys_tridecemlineatus
ENSTGUG00000006142	TNRC6A	97	71.654	ENSLACG00000006277	TNRC6A	100	71.549	Latimeria_chalumnae
ENSTGUG00000006142	TNRC6A	100	84.547	ENSLOCG00000005517	tnrc6a	93	84.547	Lepisosteus_oculatus
ENSTGUG00000006142	TNRC6A	97	80.204	ENSLAFG00000004209	TNRC6A	99	80.635	Loxodonta_africana
ENSTGUG00000006142	TNRC6A	97	77.339	ENSMFAG00000003824	TNRC6A	99	77.339	Macaca_fascicularis
ENSTGUG00000006142	TNRC6A	100	80.302	ENSMMUG00000020428	TNRC6A	99	79.833	Macaca_mulatta
ENSTGUG00000006142	TNRC6A	100	79.886	ENSMNEG00000034854	TNRC6A	99	79.316	Macaca_nemestrina
ENSTGUG00000006142	TNRC6A	97	75.800	ENSMLEG00000042737	TNRC6A	97	77.190	Mandrillus_leucophaeus
ENSTGUG00000006142	TNRC6A	100	87.627	ENSMGAG00000006455	TNRC6A	94	89.935	Meleagris_gallopavo
ENSTGUG00000006142	TNRC6A	100	79.529	ENSMAUG00000012750	Tnrc6a	99	79.110	Mesocricetus_auratus
ENSTGUG00000006142	TNRC6A	100	80.499	ENSMICG00000030685	TNRC6A	99	79.875	Microcebus_murinus
ENSTGUG00000006142	TNRC6A	100	79.717	ENSMOCG00000000152	Tnrc6a	99	78.878	Microtus_ochrogaster
ENSTGUG00000006142	TNRC6A	100	80.483	ENSMODG00000016348	TNRC6A	99	80.483	Monodelphis_domestica
ENSTGUG00000006142	TNRC6A	99	79.237	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	78.932	Mus_caroli
ENSTGUG00000006142	TNRC6A	100	79.350	ENSMUSG00000052707	Tnrc6a	99	78.719	Mus_musculus
ENSTGUG00000006142	TNRC6A	99	79.081	MGP_PahariEiJ_G0013635	Tnrc6a	100	78.577	Mus_pahari
ENSTGUG00000006142	TNRC6A	100	77.289	MGP_SPRETEiJ_G0031539	Tnrc6a	100	78.505	Mus_spretus
ENSTGUG00000006142	TNRC6A	97	73.373	ENSMPUG00000012324	TNRC6A	100	73.102	Mustela_putorius_furo
ENSTGUG00000006142	TNRC6A	97	76.758	ENSMLUG00000002701	TNRC6A	100	76.653	Myotis_lucifugus
ENSTGUG00000006142	TNRC6A	99	79.759	ENSNGAG00000020702	Tnrc6a	100	78.975	Nannospalax_galili
ENSTGUG00000006142	TNRC6A	97	79.077	ENSNLEG00000011851	TNRC6A	98	78.809	Nomascus_leucogenys
ENSTGUG00000006142	TNRC6A	76	82.927	ENSMEUG00000015959	-	77	82.927	Notamacropus_eugenii
ENSTGUG00000006142	TNRC6A	95	93.284	ENSOPRG00000005819	TNRC6A	96	93.284	Ochotona_princeps
ENSTGUG00000006142	TNRC6A	99	76.455	ENSODEG00000012802	TNRC6A	97	77.231	Octodon_degus
ENSTGUG00000006142	TNRC6A	88	82.203	ENSOANG00000007672	TNRC6A	100	82.261	Ornithorhynchus_anatinus
ENSTGUG00000006142	TNRC6A	97	77.290	ENSOCUG00000004325	TNRC6A	100	76.919	Oryctolagus_cuniculus
ENSTGUG00000006142	TNRC6A	99	78.645	ENSOGAG00000006666	TNRC6A	98	78.527	Otolemur_garnettii
ENSTGUG00000006142	TNRC6A	99	77.277	ENSOARG00000017950	TNRC6A	99	81.550	Ovis_aries
ENSTGUG00000006142	TNRC6A	99	79.917	ENSPPAG00000028379	TNRC6A	100	79.502	Pan_paniscus
ENSTGUG00000006142	TNRC6A	100	80.271	ENSPPRG00000005861	TNRC6A	99	79.436	Panthera_pardus
ENSTGUG00000006142	TNRC6A	99	79.875	ENSPTIG00000006346	TNRC6A	99	79.251	Panthera_tigris_altaica
ENSTGUG00000006142	TNRC6A	98	77.537	ENSPTRG00000007898	TNRC6A	99	77.680	Pan_troglodytes
ENSTGUG00000006142	TNRC6A	100	77.622	ENSPANG00000018523	TNRC6A	99	77.051	Papio_anubis
ENSTGUG00000006142	TNRC6A	88	76.847	ENSPKIG00000012859	tnrc6a	96	78.982	Paramormyrops_kingsleyae
ENSTGUG00000006142	TNRC6A	78	84.496	ENSPSIG00000003965	TNRC6A	100	84.375	Pelodiscus_sinensis
ENSTGUG00000006142	TNRC6A	99	79.769	ENSPEMG00000016318	Tnrc6a	100	78.931	Peromyscus_maniculatus_bairdii
ENSTGUG00000006142	TNRC6A	97	83.793	ENSPCIG00000012106	TNRC6A	99	84.063	Phascolarctos_cinereus
ENSTGUG00000006142	TNRC6A	99	77.648	ENSPPYG00000007202	TNRC6A	100	77.040	Pongo_abelii
ENSTGUG00000006142	TNRC6A	95	87.629	ENSPCAG00000008260	TNRC6A	94	87.629	Procavia_capensis
ENSTGUG00000006142	TNRC6A	100	78.512	ENSPCOG00000010134	TNRC6A	99	77.888	Propithecus_coquereli
ENSTGUG00000006142	TNRC6A	89	60.872	ENSPVAG00000012066	TNRC6A	99	61.137	Pteropus_vampyrus
ENSTGUG00000006142	TNRC6A	100	78.816	ENSRNOG00000024737	Tnrc6a	99	77.985	Rattus_norvegicus
ENSTGUG00000006142	TNRC6A	97	80.150	ENSRBIG00000014222	TNRC6A	99	80.150	Rhinopithecus_bieti
ENSTGUG00000006142	TNRC6A	100	78.411	ENSRROG00000032360	TNRC6A	99	77.800	Rhinopithecus_roxellana
ENSTGUG00000006142	TNRC6A	97	78.692	ENSSBOG00000036197	TNRC6A	100	79.557	Saimiri_boliviensis_boliviensis
ENSTGUG00000006142	TNRC6A	92	84.018	ENSSHAG00000008811	TNRC6A	99	84.646	Sarcophilus_harrisii
ENSTGUG00000006142	TNRC6A	92	60.133	ENSSFOG00015008920	tnrc6a	98	78.163	Scleropages_formosus
ENSTGUG00000006142	TNRC6A	71	64.311	ENSSARG00000002479	TNRC6A	89	64.782	Sorex_araneus
ENSTGUG00000006142	TNRC6A	91	84.527	ENSSPUG00000010525	TNRC6A	100	84.527	Sphenodon_punctatus
ENSTGUG00000006142	TNRC6A	100	80.322	ENSSSCG00000038870	TNRC6A	100	82.974	Sus_scrofa
ENSTGUG00000006142	TNRC6A	97	76.106	ENSTBEG00000014965	TNRC6A	99	75.950	Tupaia_belangeri
ENSTGUG00000006142	TNRC6A	94	81.681	ENSTTRG00000002008	TNRC6A	93	81.142	Tursiops_truncatus
ENSTGUG00000006142	TNRC6A	78	77.859	ENSUAMG00000006656	-	93	77.926	Ursus_americanus
ENSTGUG00000006142	TNRC6A	98	78.130	ENSUMAG00000008274	TNRC6A	100	83.034	Ursus_maritimus
ENSTGUG00000006142	TNRC6A	55	75.499	ENSVPAG00000010764	-	55	75.499	Vicugna_pacos
ENSTGUG00000006142	TNRC6A	93	92.973	ENSVVUG00000005380	TNRC6A	97	80.214	Vulpes_vulpes
ENSTGUG00000006142	TNRC6A	95	66.900	ENSXETG00000030437	TNRC6A	99	65.504	Xenopus_tropicalis