EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000006302 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 54572 bases
Position: chr6:10708520-10763091
Accession: 100228918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006501	AARP2CN	PF08142.12	6.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006565	-	4230	XM_012574525	ENSTGUP00000006501	1313 (aa)	XP_012429979	H0Z7F1

Gene Model

Click here to download ENSTGUG00000006302's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006302	-	99	71.232	ENSG00000165733	BMS1	99	70.936	Homo_sapiens
ENSTGUG00000006302	-	70	71.972	ENSAPOG00000002296	bms1	95	71.154	Acanthochromis_polyacanthus
ENSTGUG00000006302	-	99	72.554	ENSAMEG00000016834	BMS1	99	72.295	Ailuropoda_melanoleuca
ENSTGUG00000006302	-	99	61.960	ENSACIG00000002588	bms1	85	78.173	Amphilophus_citrinellus
ENSTGUG00000006302	-	82	70.436	ENSAOCG00000018088	bms1	94	70.513	Amphiprion_ocellaris
ENSTGUG00000006302	-	80	71.918	ENSAPEG00000014673	bms1	94	70.353	Amphiprion_percula
ENSTGUG00000006302	-	80	74.596	ENSATEG00000023465	bms1	94	69.984	Anabas_testudineus
ENSTGUG00000006302	-	95	85.839	ENSAPLG00000003759	BMS1	99	86.193	Anas_platyrhynchos
ENSTGUG00000006302	-	99	73.419	ENSACAG00000004537	-	99	74.088	Anolis_carolinensis
ENSTGUG00000006302	-	99	70.719	ENSANAG00000023432	BMS1	99	70.475	Aotus_nancymaae
ENSTGUG00000006302	-	85	69.231	ENSACLG00000001294	bms1	95	69.887	Astatotilapia_calliptera
ENSTGUG00000006302	-	81	74.828	ENSAMXG00000011236	bms1	99	61.966	Astyanax_mexicanus
ENSTGUG00000006302	-	99	72.222	ENSBTAG00000012878	BMS1	99	71.834	Bos_taurus
ENSTGUG00000006302	-	99	70.808	ENSCJAG00000021705	BMS1	99	69.954	Callithrix_jacchus
ENSTGUG00000006302	-	99	72.409	ENSCAFG00000007114	BMS1	99	71.157	Canis_familiaris
ENSTGUG00000006302	-	99	72.409	ENSCAFG00020025282	BMS1	99	71.157	Canis_lupus_dingo
ENSTGUG00000006302	-	99	72.603	ENSCHIG00000023251	BMS1	99	72.073	Capra_hircus
ENSTGUG00000006302	-	99	67.150	ENSCAPG00000008652	BMS1	99	66.437	Cavia_aperea
ENSTGUG00000006302	-	99	70.665	ENSCPOG00000000502	BMS1	99	70.015	Cavia_porcellus
ENSTGUG00000006302	-	99	57.983	ENSCCAG00000024969	-	99	56.442	Cebus_capucinus
ENSTGUG00000006302	-	99	71.385	ENSCATG00000030625	-	99	70.958	Cercocebus_atys
ENSTGUG00000006302	-	90	52.627	ENSCATG00000008695	-	97	51.395	Cercocebus_atys
ENSTGUG00000006302	-	99	71.167	ENSCLAG00000002446	BMS1	99	69.855	Chinchilla_lanigera
ENSTGUG00000006302	-	99	71.005	ENSCSAG00000011118	BMS1	99	71.034	Chlorocebus_sabaeus
ENSTGUG00000006302	-	99	70.244	ENSCHOG00000011055	BMS1	99	70.368	Choloepus_hoffmanni
ENSTGUG00000006302	-	99	80.516	ENSCPBG00000025581	BMS1	99	79.773	Chrysemys_picta_bellii
ENSTGUG00000006302	-	76	60.891	ENSCING00000003181	-	95	60.945	Ciona_intestinalis
ENSTGUG00000006302	-	63	57.783	ENSCSAVG00000004113	-	88	58.102	Ciona_savignyi
ENSTGUG00000006302	-	99	71.483	ENSCANG00000011609	BMS1	99	71.286	Colobus_angolensis_palliatus
ENSTGUG00000006302	-	99	72.116	ENSCGRG00001019461	Bms1	99	70.719	Cricetulus_griseus_chok1gshd
ENSTGUG00000006302	-	99	72.116	ENSCGRG00000009016	Bms1	99	70.719	Cricetulus_griseus_crigri
ENSTGUG00000006302	-	88	68.242	ENSCSEG00000002469	bms1	93	69.256	Cynoglossus_semilaevis
ENSTGUG00000006302	-	79	75.418	ENSCVAG00000008371	bms1	95	70.692	Cyprinodon_variegatus
ENSTGUG00000006302	-	82	73.804	ENSDARG00000054154	bms1	91	65.085	Danio_rerio
ENSTGUG00000006302	-	99	71.255	ENSDNOG00000015761	BMS1	99	70.449	Dasypus_novemcinctus
ENSTGUG00000006302	-	99	71.059	ENSDORG00000002982	Bms1	99	70.894	Dipodomys_ordii
ENSTGUG00000006302	-	83	52.684	FBgn0036686	CG7728	90	60.546	Drosophila_melanogaster
ENSTGUG00000006302	-	86	75.000	ENSETEG00000009554	BMS1	90	75.000	Echinops_telfairi
ENSTGUG00000006302	-	99	71.537	ENSEASG00005006894	BMS1	99	71.933	Equus_asinus_asinus
ENSTGUG00000006302	-	99	71.830	ENSECAG00000001358	BMS1	99	71.254	Equus_caballus
ENSTGUG00000006302	-	88	68.567	ENSELUG00000001756	bms1	93	70.128	Esox_lucius
ENSTGUG00000006302	-	99	72.416	ENSFCAG00000011220	BMS1	99	71.820	Felis_catus
ENSTGUG00000006302	-	99	93.854	ENSFALG00000006882	BMS1	99	94.580	Ficedula_albicollis
ENSTGUG00000006302	-	99	70.099	ENSFDAG00000001422	BMS1	99	68.992	Fukomys_damarensis
ENSTGUG00000006302	-	86	70.921	ENSFHEG00000003367	bms1	99	71.244	Fundulus_heteroclitus
ENSTGUG00000006302	-	86	65.916	ENSGMOG00000000718	bms1	96	65.916	Gadus_morhua
ENSTGUG00000006302	-	99	85.518	ENSGALG00000002624	BMS1	99	85.353	Gallus_gallus
ENSTGUG00000006302	-	88	66.879	ENSGACG00000015334	bms1	89	66.879	Gasterosteus_aculeatus
ENSTGUG00000006302	-	99	78.875	ENSGAGG00000003467	BMS1	99	78.490	Gopherus_agassizii
ENSTGUG00000006302	-	85	69.231	ENSHBUG00000022628	bms1	95	69.887	Haplochromis_burtoni
ENSTGUG00000006302	-	99	69.725	ENSHGLG00000000477	BMS1	99	68.884	Heterocephalus_glaber_female
ENSTGUG00000006302	-	99	69.801	ENSHGLG00100002176	BMS1	99	68.960	Heterocephalus_glaber_male
ENSTGUG00000006302	-	95	67.358	ENSHCOG00000017604	bms1	99	65.666	Hippocampus_comes
ENSTGUG00000006302	-	99	60.475	ENSIPUG00000017855	bms1	99	61.069	Ictalurus_punctatus
ENSTGUG00000006302	-	99	70.289	ENSSTOG00000015063	BMS1	99	70.475	Ictidomys_tridecemlineatus
ENSTGUG00000006302	-	99	70.849	ENSJJAG00000017328	Bms1	99	70.198	Jaculus_jaculus
ENSTGUG00000006302	-	56	65.265	ENSKMAG00000021982	bms1	90	66.041	Kryptolebias_marmoratus
ENSTGUG00000006302	-	80	71.724	ENSLBEG00000028208	bms1	94	67.572	Labrus_bergylta
ENSTGUG00000006302	-	99	64.345	ENSLACG00000001600	BMS1	99	64.568	Latimeria_chalumnae
ENSTGUG00000006302	-	82	76.063	ENSLOCG00000012914	bms1	99	63.491	Lepisosteus_oculatus
ENSTGUG00000006302	-	99	69.863	ENSLAFG00000006250	BMS1	99	69.565	Loxodonta_africana
ENSTGUG00000006302	-	80	76.952	ENSMFAG00000037771	BMS1	96	74.859	Macaca_fascicularis
ENSTGUG00000006302	-	90	60.943	ENSMMUG00000007426	-	99	60.588	Macaca_mulatta
ENSTGUG00000006302	-	88	54.152	ENSMLEG00000029084	-	99	53.972	Mandrillus_leucophaeus
ENSTGUG00000006302	-	87	68.328	ENSMAMG00000020855	bms1	95	68.116	Mastacembelus_armatus
ENSTGUG00000006302	-	85	69.231	ENSMZEG00005005663	bms1	95	69.887	Maylandia_zebra
ENSTGUG00000006302	-	95	83.254	ENSMGAG00000001170	BMS1	100	83.876	Meleagris_gallopavo
ENSTGUG00000006302	-	99	71.581	ENSMAUG00000002195	Bms1	99	70.651	Mesocricetus_auratus
ENSTGUG00000006302	-	99	69.248	ENSMICG00000009977	BMS1	99	68.877	Microcebus_murinus
ENSTGUG00000006302	-	99	70.356	ENSMOCG00000002038	Bms1	99	70.606	Microtus_ochrogaster
ENSTGUG00000006302	-	80	72.600	ENSMMOG00000000977	bms1	99	65.120	Mola_mola
ENSTGUG00000006302	-	99	73.389	ENSMODG00000001177	BMS1	99	71.903	Monodelphis_domestica
ENSTGUG00000006302	-	90	67.783	ENSMALG00000009680	bms1	98	67.897	Monopterus_albus
ENSTGUG00000006302	-	69	85.819	MGP_CAROLIEiJ_G0028785	-	84	86.284	Mus_caroli
ENSTGUG00000006302	-	99	71.177	ENSMUSG00000030138	Bms1	99	71.330	Mus_musculus
ENSTGUG00000006302	-	99	70.665	MGP_PahariEiJ_G0022539	Bms1	99	71.067	Mus_pahari
ENSTGUG00000006302	-	99	71.330	MGP_SPRETEiJ_G0029816	Bms1	99	71.429	Mus_spretus
ENSTGUG00000006302	-	99	73.124	ENSMPUG00000017276	BMS1	99	72.483	Mustela_putorius_furo
ENSTGUG00000006302	-	99	71.429	ENSMLUG00000003260	BMS1	99	70.418	Myotis_lucifugus
ENSTGUG00000006302	-	86	71.034	ENSNGAG00000015258	Bms1	96	68.329	Nannospalax_galili
ENSTGUG00000006302	-	99	69.855	ENSNLEG00000015791	BMS1	99	69.402	Nomascus_leucogenys
ENSTGUG00000006302	-	79	84.561	ENSOPRG00000005195	BMS1	80	84.988	Ochotona_princeps
ENSTGUG00000006302	-	99	69.863	ENSODEG00000005554	BMS1	99	69.885	Octodon_degus
ENSTGUG00000006302	-	87	70.275	ENSONIG00000007227	bms1	95	70.275	Oreochromis_niloticus
ENSTGUG00000006302	-	99	72.603	ENSOANG00000000662	-	99	72.998	Ornithorhynchus_anatinus
ENSTGUG00000006302	-	99	70.404	ENSOCUG00000005354	BMS1	99	70.706	Oryctolagus_cuniculus
ENSTGUG00000006302	-	87	69.404	ENSORLG00000014655	bms1	95	69.404	Oryzias_latipes
ENSTGUG00000006302	-	81	72.727	ENSORLG00020016246	bms1	99	60.638	Oryzias_latipes_hni
ENSTGUG00000006302	-	87	68.760	ENSORLG00015014183	bms1	97	68.760	Oryzias_latipes_hsok
ENSTGUG00000006302	-	80	73.636	ENSOMEG00000015042	bms1	95	70.113	Oryzias_melastigma
ENSTGUG00000006302	-	99	71.071	ENSOGAG00000006511	BMS1	99	70.872	Otolemur_garnettii
ENSTGUG00000006302	-	99	72.458	ENSOARG00000003900	BMS1	99	71.963	Ovis_aries
ENSTGUG00000006302	-	99	67.737	ENSPPAG00000027837	BMS1	99	67.893	Pan_paniscus
ENSTGUG00000006302	-	99	72.273	ENSPPRG00000001311	BMS1	99	71.844	Panthera_pardus
ENSTGUG00000006302	-	99	70.985	ENSPTIG00000009652	BMS1	99	70.665	Panthera_tigris_altaica
ENSTGUG00000006302	-	99	71.155	ENSPTRG00000002441	BMS1	99	70.958	Pan_troglodytes
ENSTGUG00000006302	-	99	77.063	ENSPSIG00000006481	BMS1	99	78.023	Pelodiscus_sinensis
ENSTGUG00000006302	-	99	65.088	ENSPEMG00000022467	Bms1	99	64.494	Peromyscus_maniculatus_bairdii
ENSTGUG00000006302	-	99	72.907	ENSPCIG00000001339	BMS1	99	87.234	Phascolarctos_cinereus
ENSTGUG00000006302	-	84	69.417	ENSPFOG00000015180	bms1	99	65.882	Poecilia_formosa
ENSTGUG00000006302	-	84	69.692	ENSPMEG00000023176	bms1	90	69.854	Poecilia_mexicana
ENSTGUG00000006302	-	84	69.692	ENSPREG00000002695	bms1	98	66.288	Poecilia_reticulata
ENSTGUG00000006302	-	61	66.127	ENSPPYG00000002836	-	99	64.808	Pongo_abelii
ENSTGUG00000006302	-	72	86.395	ENSPCAG00000014528	BMS1	72	86.395	Procavia_capensis
ENSTGUG00000006302	-	95	68.279	ENSPCOG00000023834	-	100	67.561	Propithecus_coquereli
ENSTGUG00000006302	-	99	69.307	ENSPVAG00000000725	BMS1	99	69.385	Pteropus_vampyrus
ENSTGUG00000006302	-	85	69.952	ENSPNYG00000018866	bms1	93	69.952	Pundamilia_nyererei
ENSTGUG00000006302	-	82	70.000	ENSRNOG00000006576	Bms1	99	70.308	Rattus_norvegicus
ENSTGUG00000006302	-	99	69.495	ENSRROG00000040101	BMS1	99	69.669	Rhinopithecus_roxellana
ENSTGUG00000006302	-	85	43.775	YPL217C	-	87	48.139	Saccharomyces_cerevisiae
ENSTGUG00000006302	-	99	71.101	ENSSBOG00000035778	BMS1	99	69.962	Saimiri_boliviensis_boliviensis
ENSTGUG00000006302	-	99	71.807	ENSSHAG00000005062	BMS1	99	72.006	Sarcophilus_harrisii
ENSTGUG00000006302	-	88	70.973	ENSSFOG00015022313	bms1	50	70.973	Scleropages_formosus
ENSTGUG00000006302	-	80	73.913	ENSSMAG00000019966	bms1	94	69.293	Scophthalmus_maximus
ENSTGUG00000006302	-	87	69.404	ENSSDUG00000016875	bms1	93	70.048	Seriola_dumerili
ENSTGUG00000006302	-	87	69.726	ENSSLDG00000015199	bms1	94	70.598	Seriola_lalandi_dorsalis
ENSTGUG00000006302	-	70	59.826	ENSSARG00000014407	BMS1	100	59.027	Sorex_araneus
ENSTGUG00000006302	-	99	75.873	ENSSPUG00000014454	BMS1	99	76.466	Sphenodon_punctatus
ENSTGUG00000006302	-	99	71.603	ENSSSCG00000010198	BMS1	99	71.407	Sus_scrofa
ENSTGUG00000006302	-	85	64.671	ENSTRUG00000008028	bms1	95	63.813	Takifugu_rubripes
ENSTGUG00000006302	-	99	58.030	ENSTNIG00000006216	bms1	89	65.267	Tetraodon_nigroviridis
ENSTGUG00000006302	-	59	79.195	ENSTBEG00000001673	-	64	75.974	Tupaia_belangeri
ENSTGUG00000006302	-	99	72.464	ENSUAMG00000023996	BMS1	99	72.713	Ursus_americanus
ENSTGUG00000006302	-	99	72.311	ENSUMAG00000016523	BMS1	99	72.560	Ursus_maritimus
ENSTGUG00000006302	-	81	83.070	ENSVPAG00000007477	BMS1	92	83.146	Vicugna_pacos
ENSTGUG00000006302	-	99	72.332	ENSVVUG00000021305	BMS1	99	71.319	Vulpes_vulpes
ENSTGUG00000006302	-	98	64.407	ENSXETG00000008158	bms1	99	65.517	Xenopus_tropicalis
ENSTGUG00000006302	-	84	69.144	ENSXCOG00000000506	bms1	94	77.171	Xiphophorus_couchianus
ENSTGUG00000006302	-	84	69.741	ENSXMAG00000014236	bms1	95	69.903	Xiphophorus_maculatus