EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000006414 (Gene tree)
Gene ID: 100221900
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 11656 bases
Position: chr5:6699379-6711034
Accession: 100221900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006648	CPSF_A	PF03178.15	1.2e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006714	DDB1-201	3853	XM_002191820	ENSTGUP00000006648	1140 (aa)	XP_002191856	H0Z7U8

Gene Model

Click here to download ENSTGUG00000006414's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03420	Nucleotide excision repair	KEGG
tgu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006414	DDB1	100	97.018	ENSG00000167986	DDB1	100	97.945	Homo_sapiens
ENSTGUG00000006414	DDB1	98	90.485	ENSAPOG00000005036	ddb1	99	91.327	Acanthochromis_polyacanthus
ENSTGUG00000006414	DDB1	100	97.105	ENSAMEG00000016518	DDB1	100	97.105	Ailuropoda_melanoleuca
ENSTGUG00000006414	DDB1	86	91.429	ENSACIG00000020624	ddb1	99	91.429	Amphilophus_citrinellus
ENSTGUG00000006414	DDB1	100	90.351	ENSAOCG00000003066	ddb1	100	90.351	Amphiprion_ocellaris
ENSTGUG00000006414	DDB1	100	90.439	ENSAPEG00000000092	ddb1	100	90.439	Amphiprion_percula
ENSTGUG00000006414	DDB1	94	91.370	ENSATEG00000020571	ddb1	97	91.370	Anabas_testudineus
ENSTGUG00000006414	DDB1	98	98.311	ENSAPLG00000007174	DDB1	99	98.311	Anas_platyrhynchos
ENSTGUG00000006414	DDB1	100	96.579	ENSACAG00000017758	DDB1	100	96.579	Anolis_carolinensis
ENSTGUG00000006414	DDB1	100	97.018	ENSANAG00000021878	DDB1	100	97.018	Aotus_nancymaae
ENSTGUG00000006414	DDB1	100	90.702	ENSACLG00000012401	ddb1	100	90.702	Astatotilapia_calliptera
ENSTGUG00000006414	DDB1	100	97.105	ENSBTAG00000021569	DDB1	93	97.105	Bos_taurus
ENSTGUG00000006414	DDB1	100	36.784	WBGene00010890	ddb-1	100	36.784	Caenorhabditis_elegans
ENSTGUG00000006414	DDB1	100	97.018	ENSCJAG00000019319	DDB1	100	97.018	Callithrix_jacchus
ENSTGUG00000006414	DDB1	100	97.105	ENSCAFG00000016264	DDB1	100	97.105	Canis_familiaris
ENSTGUG00000006414	DDB1	94	97.749	ENSCAFG00020012722	DDB1	98	97.749	Canis_lupus_dingo
ENSTGUG00000006414	DDB1	100	97.105	ENSCHIG00000014969	DDB1	100	97.105	Capra_hircus
ENSTGUG00000006414	DDB1	100	96.579	ENSTSYG00000008027	DDB1	100	96.579	Carlito_syrichta
ENSTGUG00000006414	DDB1	98	96.425	ENSCAPG00000010786	DDB1	100	96.425	Cavia_aperea
ENSTGUG00000006414	DDB1	100	96.491	ENSCPOG00000009956	DDB1	100	96.491	Cavia_porcellus
ENSTGUG00000006414	DDB1	100	97.018	ENSCCAG00000035883	DDB1	100	97.018	Cebus_capucinus
ENSTGUG00000006414	DDB1	100	94.792	ENSCATG00000044495	DDB1	100	94.792	Cercocebus_atys
ENSTGUG00000006414	DDB1	100	96.579	ENSCLAG00000004126	DDB1	100	96.579	Chinchilla_lanigera
ENSTGUG00000006414	DDB1	100	97.018	ENSCSAG00000006392	DDB1	100	97.018	Chlorocebus_sabaeus
ENSTGUG00000006414	DDB1	88	89.773	ENSCHOG00000011377	DDB1	90	89.773	Choloepus_hoffmanni
ENSTGUG00000006414	DDB1	100	97.807	ENSCPBG00000017728	DDB1	100	97.807	Chrysemys_picta_bellii
ENSTGUG00000006414	DDB1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSTGUG00000006414	DDB1	94	60.221	ENSCSAVG00000004783	-	100	60.221	Ciona_savignyi
ENSTGUG00000006414	DDB1	100	97.018	ENSCANG00000019948	DDB1	100	97.018	Colobus_angolensis_palliatus
ENSTGUG00000006414	DDB1	100	97.105	ENSCGRG00001016599	Ddb1	100	97.105	Cricetulus_griseus_chok1gshd
ENSTGUG00000006414	DDB1	100	97.105	ENSCGRG00000013427	Ddb1	100	97.105	Cricetulus_griseus_crigri
ENSTGUG00000006414	DDB1	93	90.763	ENSCSEG00000012499	ddb1	99	89.271	Cynoglossus_semilaevis
ENSTGUG00000006414	DDB1	94	91.182	ENSCVAG00000019531	ddb1	99	91.182	Cyprinodon_variegatus
ENSTGUG00000006414	DDB1	100	87.653	ENSDARG00000074431	ddb1	100	87.773	Danio_rerio
ENSTGUG00000006414	DDB1	94	97.561	ENSDNOG00000014884	DDB1	97	97.561	Dasypus_novemcinctus
ENSTGUG00000006414	DDB1	84	98.190	ENSDORG00000000127	Ddb1	100	98.190	Dipodomys_ordii
ENSTGUG00000006414	DDB1	100	60.540	FBgn0260962	pic	100	60.540	Drosophila_melanogaster
ENSTGUG00000006414	DDB1	71	98.425	ENSETEG00000001053	-	71	98.425	Echinops_telfairi
ENSTGUG00000006414	DDB1	78	84.814	ENSEBUG00000014593	ddb1	97	84.814	Eptatretus_burgeri
ENSTGUG00000006414	DDB1	100	96.930	ENSEASG00005008184	DDB1	100	96.930	Equus_asinus_asinus
ENSTGUG00000006414	DDB1	100	97.018	ENSECAG00000012136	DDB1	100	97.018	Equus_caballus
ENSTGUG00000006414	DDB1	85	94.949	ENSEEUG00000003194	DDB1	85	94.949	Erinaceus_europaeus
ENSTGUG00000006414	DDB1	100	90.263	ENSELUG00000023868	ddb1	100	90.263	Esox_lucius
ENSTGUG00000006414	DDB1	100	97.105	ENSFCAG00000029716	DDB1	100	97.105	Felis_catus
ENSTGUG00000006414	DDB1	100	99.474	ENSFALG00000011981	DDB1	100	99.474	Ficedula_albicollis
ENSTGUG00000006414	DDB1	100	96.667	ENSFDAG00000005128	DDB1	100	96.667	Fukomys_damarensis
ENSTGUG00000006414	DDB1	90	90.196	ENSFHEG00000022133	ddb1	99	90.196	Fundulus_heteroclitus
ENSTGUG00000006414	DDB1	79	94.983	ENSGMOG00000019386	ddb1	93	94.983	Gadus_morhua
ENSTGUG00000006414	DDB1	100	98.596	ENSGALG00000042333	DDB1	100	98.596	Gallus_gallus
ENSTGUG00000006414	DDB1	94	90.807	ENSGAFG00000013142	ddb1	99	90.807	Gambusia_affinis
ENSTGUG00000006414	DDB1	96	89.643	ENSGACG00000017182	ddb1	100	89.643	Gasterosteus_aculeatus
ENSTGUG00000006414	DDB1	95	97.878	ENSGAGG00000014124	DDB1	100	97.878	Gopherus_agassizii
ENSTGUG00000006414	DDB1	100	97.018	ENSGGOG00000004052	DDB1	100	97.018	Gorilla_gorilla
ENSTGUG00000006414	DDB1	100	90.702	ENSHBUG00000008873	ddb1	100	90.702	Haplochromis_burtoni
ENSTGUG00000006414	DDB1	100	96.667	ENSHGLG00000018430	DDB1	100	96.667	Heterocephalus_glaber_female
ENSTGUG00000006414	DDB1	100	95.614	ENSHGLG00100014475	DDB1	100	95.614	Heterocephalus_glaber_male
ENSTGUG00000006414	DDB1	94	90.713	ENSHCOG00000018670	ddb1	98	90.713	Hippocampus_comes
ENSTGUG00000006414	DDB1	100	89.912	ENSIPUG00000005612	DDB1	100	89.912	Ictalurus_punctatus
ENSTGUG00000006414	DDB1	100	97.018	ENSSTOG00000007552	DDB1	100	97.018	Ictidomys_tridecemlineatus
ENSTGUG00000006414	DDB1	100	97.018	ENSJJAG00000017769	Ddb1	100	97.018	Jaculus_jaculus
ENSTGUG00000006414	DDB1	94	90.901	ENSKMAG00000002315	ddb1	99	90.901	Kryptolebias_marmoratus
ENSTGUG00000006414	DDB1	85	91.088	ENSLBEG00000017065	ddb1	99	91.088	Labrus_bergylta
ENSTGUG00000006414	DDB1	100	93.345	ENSLACG00000017611	DDB1	100	93.345	Latimeria_chalumnae
ENSTGUG00000006414	DDB1	92	84.127	ENSLOCG00000000012	ddb1	100	84.127	Lepisosteus_oculatus
ENSTGUG00000006414	DDB1	100	96.842	ENSLAFG00000011513	DDB1	100	96.842	Loxodonta_africana
ENSTGUG00000006414	DDB1	100	97.018	ENSMFAG00000042035	DDB1	100	97.018	Macaca_fascicularis
ENSTGUG00000006414	DDB1	99	97.082	ENSMMUG00000002691	DDB1	99	97.082	Macaca_mulatta
ENSTGUG00000006414	DDB1	100	97.018	ENSMNEG00000031559	DDB1	100	97.018	Macaca_nemestrina
ENSTGUG00000006414	DDB1	100	97.018	ENSMLEG00000044136	DDB1	100	97.018	Mandrillus_leucophaeus
ENSTGUG00000006414	DDB1	100	90.789	ENSMAMG00000014372	ddb1	100	90.789	Mastacembelus_armatus
ENSTGUG00000006414	DDB1	100	90.702	ENSMZEG00005013835	ddb1	100	90.702	Maylandia_zebra
ENSTGUG00000006414	DDB1	94	98.138	ENSMGAG00000004990	DDB1	100	98.138	Meleagris_gallopavo
ENSTGUG00000006414	DDB1	100	97.105	ENSMAUG00000012926	Ddb1	100	97.105	Mesocricetus_auratus
ENSTGUG00000006414	DDB1	100	97.018	ENSMICG00000013703	DDB1	100	97.018	Microcebus_murinus
ENSTGUG00000006414	DDB1	100	97.018	ENSMOCG00000020499	Ddb1	100	97.018	Microtus_ochrogaster
ENSTGUG00000006414	DDB1	86	91.224	ENSMMOG00000001758	ddb1	99	91.224	Mola_mola
ENSTGUG00000006414	DDB1	100	87.716	ENSMODG00000020353	DDB1	100	87.716	Monodelphis_domestica
ENSTGUG00000006414	DDB1	100	90.702	ENSMALG00000014071	ddb1	100	90.702	Monopterus_albus
ENSTGUG00000006414	DDB1	100	97.105	MGP_CAROLIEiJ_G0022695	Ddb1	100	97.105	Mus_caroli
ENSTGUG00000006414	DDB1	100	97.018	ENSMUSG00000024740	Ddb1	100	97.018	Mus_musculus
ENSTGUG00000006414	DDB1	100	97.105	MGP_PahariEiJ_G0014189	Ddb1	100	97.105	Mus_pahari
ENSTGUG00000006414	DDB1	100	97.105	MGP_SPRETEiJ_G0023609	Ddb1	100	97.105	Mus_spretus
ENSTGUG00000006414	DDB1	100	93.947	ENSMPUG00000014200	DDB1	100	93.947	Mustela_putorius_furo
ENSTGUG00000006414	DDB1	100	97.018	ENSMLUG00000013232	DDB1	100	97.018	Myotis_lucifugus
ENSTGUG00000006414	DDB1	100	96.842	ENSNGAG00000009384	Ddb1	100	96.842	Nannospalax_galili
ENSTGUG00000006414	DDB1	100	90.789	ENSNBRG00000019581	ddb1	100	90.789	Neolamprologus_brichardi
ENSTGUG00000006414	DDB1	100	94.184	ENSNLEG00000002022	DDB1	100	94.184	Nomascus_leucogenys
ENSTGUG00000006414	DDB1	90	95.423	ENSMEUG00000001099	DDB1	93	95.423	Notamacropus_eugenii
ENSTGUG00000006414	DDB1	90	88.943	ENSOPRG00000008254	DDB1	90	88.943	Ochotona_princeps
ENSTGUG00000006414	DDB1	100	96.316	ENSODEG00000002419	DDB1	100	96.316	Octodon_degus
ENSTGUG00000006414	DDB1	100	90.702	ENSONIG00000005804	ddb1	100	90.702	Oreochromis_niloticus
ENSTGUG00000006414	DDB1	91	96.996	ENSOANG00000004897	DDB1	100	96.996	Ornithorhynchus_anatinus
ENSTGUG00000006414	DDB1	100	97.193	ENSOCUG00000001667	DDB1	100	97.193	Oryctolagus_cuniculus
ENSTGUG00000006414	DDB1	96	89.184	ENSORLG00000001399	ddb1	98	90.970	Oryzias_latipes
ENSTGUG00000006414	DDB1	96	89.093	ENSORLG00020001277	ddb1	97	89.093	Oryzias_latipes_hni
ENSTGUG00000006414	DDB1	94	90.901	ENSORLG00015002080	ddb1	98	90.901	Oryzias_latipes_hsok
ENSTGUG00000006414	DDB1	94	91.370	ENSOMEG00000006181	ddb1	96	91.370	Oryzias_melastigma
ENSTGUG00000006414	DDB1	100	97.018	ENSOGAG00000016103	DDB1	100	97.018	Otolemur_garnettii
ENSTGUG00000006414	DDB1	99	97.240	ENSOARG00000011716	DDB1	98	97.240	Ovis_aries
ENSTGUG00000006414	DDB1	100	97.018	ENSPPAG00000035343	DDB1	100	97.018	Pan_paniscus
ENSTGUG00000006414	DDB1	100	97.105	ENSPPRG00000013300	DDB1	100	97.105	Panthera_pardus
ENSTGUG00000006414	DDB1	98	97.051	ENSPTIG00000006909	DDB1	98	97.051	Panthera_tigris_altaica
ENSTGUG00000006414	DDB1	100	97.018	ENSPTRG00000003737	DDB1	100	97.018	Pan_troglodytes
ENSTGUG00000006414	DDB1	100	97.018	ENSPANG00000000242	DDB1	100	97.018	Papio_anubis
ENSTGUG00000006414	DDB1	94	90.994	ENSPKIG00000019213	ddb1	93	90.994	Paramormyrops_kingsleyae
ENSTGUG00000006414	DDB1	98	97.153	ENSPSIG00000013275	DDB1	100	97.153	Pelodiscus_sinensis
ENSTGUG00000006414	DDB1	86	91.122	ENSPMGG00000021179	ddb1	99	91.122	Periophthalmus_magnuspinnatus
ENSTGUG00000006414	DDB1	100	97.105	ENSPEMG00000012241	Ddb1	100	97.105	Peromyscus_maniculatus_bairdii
ENSTGUG00000006414	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSTGUG00000006414	DDB1	100	97.281	ENSPCIG00000002643	DDB1	100	97.281	Phascolarctos_cinereus
ENSTGUG00000006414	DDB1	100	90.272	ENSPFOG00000002768	ddb1	100	90.272	Poecilia_formosa
ENSTGUG00000006414	DDB1	100	90.351	ENSPLAG00000017227	ddb1	100	90.351	Poecilia_latipinna
ENSTGUG00000006414	DDB1	100	90.351	ENSPMEG00000011398	ddb1	100	90.351	Poecilia_mexicana
ENSTGUG00000006414	DDB1	94	90.994	ENSPREG00000004440	ddb1	97	90.994	Poecilia_reticulata
ENSTGUG00000006414	DDB1	100	92.757	ENSPPYG00000003193	DDB1	100	92.757	Pongo_abelii
ENSTGUG00000006414	DDB1	85	95.970	ENSPCAG00000011040	DDB1	85	95.970	Procavia_capensis
ENSTGUG00000006414	DDB1	100	95.709	ENSPCOG00000015176	DDB1	100	95.709	Propithecus_coquereli
ENSTGUG00000006414	DDB1	100	96.930	ENSPVAG00000003847	DDB1	100	96.930	Pteropus_vampyrus
ENSTGUG00000006414	DDB1	94	91.182	ENSPNAG00000006635	ddb1	96	91.182	Pygocentrus_nattereri
ENSTGUG00000006414	DDB1	100	97.018	ENSRNOG00000020715	Ddb1	100	97.018	Rattus_norvegicus
ENSTGUG00000006414	DDB1	100	97.018	ENSRBIG00000033611	DDB1	100	97.018	Rhinopithecus_bieti
ENSTGUG00000006414	DDB1	100	97.018	ENSRROG00000041407	DDB1	100	97.018	Rhinopithecus_roxellana
ENSTGUG00000006414	DDB1	100	97.105	ENSSBOG00000019775	DDB1	100	97.105	Saimiri_boliviensis_boliviensis
ENSTGUG00000006414	DDB1	94	95.421	ENSSHAG00000011600	DDB1	100	95.421	Sarcophilus_harrisii
ENSTGUG00000006414	DDB1	94	90.706	ENSSFOG00015011151	ddb1	97	90.706	Scleropages_formosus
ENSTGUG00000006414	DDB1	100	90.263	ENSSMAG00000009495	ddb1	100	90.263	Scophthalmus_maximus
ENSTGUG00000006414	DDB1	100	90.614	ENSSDUG00000004642	ddb1	100	90.614	Seriola_dumerili
ENSTGUG00000006414	DDB1	100	90.614	ENSSLDG00000015804	ddb1	100	90.614	Seriola_lalandi_dorsalis
ENSTGUG00000006414	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSTGUG00000006414	DDB1	100	97.719	ENSSPUG00000019338	DDB1	100	97.719	Sphenodon_punctatus
ENSTGUG00000006414	DDB1	94	91.276	ENSSPAG00000009888	ddb1	98	91.276	Stegastes_partitus
ENSTGUG00000006414	DDB1	100	96.491	ENSSSCG00000013094	DDB1	100	96.491	Sus_scrofa
ENSTGUG00000006414	DDB1	94	89.869	ENSTRUG00000016682	ddb1	98	89.869	Takifugu_rubripes
ENSTGUG00000006414	DDB1	88	84.531	ENSTNIG00000009565	ddb1	99	84.531	Tetraodon_nigroviridis
ENSTGUG00000006414	DDB1	92	91.645	ENSTTRG00000011055	DDB1	94	91.645	Tursiops_truncatus
ENSTGUG00000006414	DDB1	94	97.749	ENSUAMG00000017793	DDB1	93	97.749	Ursus_americanus
ENSTGUG00000006414	DDB1	94	97.749	ENSUMAG00000011788	DDB1	97	97.749	Ursus_maritimus
ENSTGUG00000006414	DDB1	90	93.283	ENSVPAG00000007963	DDB1	92	93.283	Vicugna_pacos
ENSTGUG00000006414	DDB1	100	97.105	ENSVVUG00000004987	DDB1	100	97.105	Vulpes_vulpes
ENSTGUG00000006414	DDB1	100	92.395	ENSXETG00000008820	ddb1	100	92.395	Xenopus_tropicalis
ENSTGUG00000006414	DDB1	86	90.918	ENSXCOG00000013956	ddb1	99	90.918	Xiphophorus_couchianus
ENSTGUG00000006414	DDB1	94	90.807	ENSXMAG00000000022	ddb1	99	90.807	Xiphophorus_maculatus