EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000006423 (Gene tree)
Gene ID: 100232803
Gene Symbol: -
Alias: -
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 30502 bases
Position: chr6:12008628-12039129
Accession: 100232803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006638	RNA_pol_Rpb1_5	PF04998.17	1.5e-88	1	1
ENSTGUP00000006638	RNA_pol_Rpb1_4	PF05000.17	2.3e-32	1	1
ENSTGUP00000006638	RNA_pol_Rpb1_2	PF00623.20	1.1e-74	1	1
ENSTGUP00000006638	RNA_pol_Rpb1_3	PF04983.18	5.7e-42	1	1
ENSTGUP00000006638	RNA_pol_Rpb1_1	PF04997.12	2.6e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000006704	-	4173	XM_002195440	ENSTGUP00000006638	1390 (aa)	XP_002195476	H0Z7T8

Gene Model

Click here to download ENSTGUG00000006423's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03020	RNA polymerase	KEGG
tgu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000006423	-	80	53.623	ENSTGUG00000010704	POLR1A	74	53.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006423	-	100	95.827	ENSG00000148606	POLR3A	100	95.827	Homo_sapiens
ENSTGUG00000006423	-	62	86.992	ENSAPOG00000022727	polr3a	99	86.992	Acanthochromis_polyacanthus
ENSTGUG00000006423	-	100	95.477	ENSAMEG00000017801	POLR3A	100	95.477	Ailuropoda_melanoleuca
ENSTGUG00000006423	-	93	90.902	ENSACIG00000024504	polr3a	97	90.902	Amphilophus_citrinellus
ENSTGUG00000006423	-	100	87.410	ENSAOCG00000003949	-	100	87.410	Amphiprion_ocellaris
ENSTGUG00000006423	-	100	90.719	ENSAOCG00000002071	polr3a	100	90.719	Amphiprion_ocellaris
ENSTGUG00000006423	-	100	90.576	ENSAPEG00000001966	-	100	90.576	Amphiprion_percula
ENSTGUG00000006423	-	100	90.719	ENSAPEG00000013351	polr3a	100	90.719	Amphiprion_percula
ENSTGUG00000006423	-	100	90.504	ENSATEG00000023277	polr3a	100	90.504	Anabas_testudineus
ENSTGUG00000006423	-	99	98.836	ENSAPLG00000015878	POLR3A	99	98.836	Anas_platyrhynchos
ENSTGUG00000006423	-	93	94.652	ENSACAG00000007985	POLR3A	99	94.652	Anolis_carolinensis
ENSTGUG00000006423	-	100	92.826	ENSANAG00000028922	POLR3A	100	92.826	Aotus_nancymaae
ENSTGUG00000006423	-	100	89.856	ENSACLG00000005914	polr3a	100	89.856	Astatotilapia_calliptera
ENSTGUG00000006423	-	100	87.914	ENSAMXG00000018852	polr3a	100	87.914	Astyanax_mexicanus
ENSTGUG00000006423	-	100	95.899	ENSBTAG00000013259	POLR3A	100	95.899	Bos_taurus
ENSTGUG00000006423	-	99	57.153	WBGene00004411	rpc-1	99	57.153	Caenorhabditis_elegans
ENSTGUG00000006423	-	100	95.683	ENSCJAG00000001015	POLR3A	100	95.683	Callithrix_jacchus
ENSTGUG00000006423	-	100	95.683	ENSCAFG00000015546	POLR3A	100	95.683	Canis_familiaris
ENSTGUG00000006423	-	100	95.683	ENSCAFG00020014711	POLR3A	100	95.683	Canis_lupus_dingo
ENSTGUG00000006423	-	100	95.324	ENSCHIG00000000352	POLR3A	100	95.324	Capra_hircus
ENSTGUG00000006423	-	100	95.324	ENSTSYG00000006671	POLR3A	100	95.324	Carlito_syrichta
ENSTGUG00000006423	-	99	95.127	ENSCAPG00000016031	POLR3A	100	95.127	Cavia_aperea
ENSTGUG00000006423	-	100	95.180	ENSCPOG00000022387	POLR3A	100	95.180	Cavia_porcellus
ENSTGUG00000006423	-	100	93.453	ENSCCAG00000032995	POLR3A	100	93.453	Cebus_capucinus
ENSTGUG00000006423	-	100	95.612	ENSCATG00000035842	POLR3A	100	95.612	Cercocebus_atys
ENSTGUG00000006423	-	100	95.252	ENSCLAG00000009629	POLR3A	100	95.252	Chinchilla_lanigera
ENSTGUG00000006423	-	100	95.755	ENSCSAG00000009292	POLR3A	100	95.755	Chlorocebus_sabaeus
ENSTGUG00000006423	-	81	86.688	ENSCHOG00000008368	POLR3A	95	86.688	Choloepus_hoffmanni
ENSTGUG00000006423	-	99	96.976	ENSCPBG00000002079	POLR3A	99	96.976	Chrysemys_picta_bellii
ENSTGUG00000006423	-	99	69.597	ENSCSAVG00000009925	-	99	69.597	Ciona_savignyi
ENSTGUG00000006423	-	86	91.584	ENSCANG00000041071	POLR3A	98	95.570	Colobus_angolensis_palliatus
ENSTGUG00000006423	-	78	96.125	ENSCGRG00001015599	-	92	96.125	Cricetulus_griseus_chok1gshd
ENSTGUG00000006423	-	88	95.601	ENSCGRG00000001019	Polr3a	100	95.601	Cricetulus_griseus_crigri
ENSTGUG00000006423	-	100	90.216	ENSCSEG00000016653	polr3a	100	90.216	Cynoglossus_semilaevis
ENSTGUG00000006423	-	100	89.712	ENSCVAG00000023049	polr3a	100	89.712	Cyprinodon_variegatus
ENSTGUG00000006423	-	99	90.785	ENSDARG00000102569	polr3a	99	90.785	Danio_rerio
ENSTGUG00000006423	-	100	95.036	ENSDNOG00000010194	POLR3A	100	95.036	Dasypus_novemcinctus
ENSTGUG00000006423	-	100	95.612	ENSDORG00000000184	Polr3a	100	95.612	Dipodomys_ordii
ENSTGUG00000006423	-	99	57.453	FBgn0030687	CG17209	99	57.453	Drosophila_melanogaster
ENSTGUG00000006423	-	88	94.332	ENSETEG00000007477	POLR3A	89	94.332	Echinops_telfairi
ENSTGUG00000006423	-	59	76.932	ENSEBUG00000013761	polr3a	98	76.932	Eptatretus_burgeri
ENSTGUG00000006423	-	100	95.971	ENSEASG00005023053	POLR3A	100	95.971	Equus_asinus_asinus
ENSTGUG00000006423	-	97	96.200	ENSECAG00000019416	POLR3A	100	95.872	Equus_caballus
ENSTGUG00000006423	-	96	90.828	ENSEEUG00000001774	POLR3A	100	90.828	Erinaceus_europaeus
ENSTGUG00000006423	-	100	88.442	ENSELUG00000014016	polr3a	100	88.442	Esox_lucius
ENSTGUG00000006423	-	100	95.971	ENSFCAG00000000843	POLR3A	100	95.971	Felis_catus
ENSTGUG00000006423	-	100	99.281	ENSFALG00000006913	POLR3A	100	99.281	Ficedula_albicollis
ENSTGUG00000006423	-	100	95.108	ENSFDAG00000007813	POLR3A	100	95.108	Fukomys_damarensis
ENSTGUG00000006423	-	95	90.000	ENSFHEG00000011922	polr3a	99	90.000	Fundulus_heteroclitus
ENSTGUG00000006423	-	100	85.159	ENSGMOG00000000291	polr3a	99	85.159	Gadus_morhua
ENSTGUG00000006423	-	100	98.921	ENSGALG00000004947	POLR3A	100	98.921	Gallus_gallus
ENSTGUG00000006423	-	100	90.072	ENSGAFG00000005112	polr3a	100	90.072	Gambusia_affinis
ENSTGUG00000006423	-	100	89.496	ENSGACG00000002304	polr3a	100	89.496	Gasterosteus_aculeatus
ENSTGUG00000006423	-	95	96.896	ENSGAGG00000010386	POLR3A	98	96.896	Gopherus_agassizii
ENSTGUG00000006423	-	99	94.653	ENSGGOG00000027729	POLR3A	100	96.340	Gorilla_gorilla
ENSTGUG00000006423	-	100	90.000	ENSHBUG00000018098	polr3a	100	90.000	Haplochromis_burtoni
ENSTGUG00000006423	-	100	95.036	ENSHGLG00000017899	POLR3A	100	95.036	Heterocephalus_glaber_female
ENSTGUG00000006423	-	100	95.036	ENSHGLG00100008483	POLR3A	100	95.036	Heterocephalus_glaber_male
ENSTGUG00000006423	-	100	89.209	ENSHCOG00000001075	polr3a	100	89.209	Hippocampus_comes
ENSTGUG00000006423	-	100	95.468	ENSSTOG00000012983	POLR3A	100	95.468	Ictidomys_tridecemlineatus
ENSTGUG00000006423	-	100	89.928	ENSKMAG00000015290	polr3a	100	89.928	Kryptolebias_marmoratus
ENSTGUG00000006423	-	99	88.697	ENSLBEG00000017214	polr3a	99	88.697	Labrus_bergylta
ENSTGUG00000006423	-	97	90.186	ENSLACG00000018557	POLR3A	99	90.186	Latimeria_chalumnae
ENSTGUG00000006423	-	100	92.247	ENSLOCG00000004942	polr3a	100	92.247	Lepisosteus_oculatus
ENSTGUG00000006423	-	100	94.177	ENSLAFG00000016719	POLR3A	100	94.177	Loxodonta_africana
ENSTGUG00000006423	-	100	95.683	ENSMFAG00000032218	POLR3A	100	95.683	Macaca_fascicularis
ENSTGUG00000006423	-	100	95.683	ENSMMUG00000005514	POLR3A	100	95.683	Macaca_mulatta
ENSTGUG00000006423	-	99	88.921	ENSMNEG00000035163	POLR3A	99	95.819	Macaca_nemestrina
ENSTGUG00000006423	-	100	91.451	ENSMLEG00000030014	POLR3A	98	96.203	Mandrillus_leucophaeus
ENSTGUG00000006423	-	100	90.288	ENSMAMG00000017497	polr3a	100	90.288	Mastacembelus_armatus
ENSTGUG00000006423	-	100	89.856	ENSMZEG00005000576	polr3a	100	89.856	Maylandia_zebra
ENSTGUG00000006423	-	100	80.000	ENSMGAG00000005713	-	100	80.000	Meleagris_gallopavo
ENSTGUG00000006423	-	100	93.381	ENSMAUG00000016247	Polr3a	100	93.381	Mesocricetus_auratus
ENSTGUG00000006423	-	100	95.971	ENSMICG00000005937	POLR3A	100	96.612	Microcebus_murinus
ENSTGUG00000006423	-	100	95.612	ENSMOCG00000012185	Polr3a	100	95.612	Microtus_ochrogaster
ENSTGUG00000006423	-	100	89.209	ENSMMOG00000013822	polr3a	100	89.209	Mola_mola
ENSTGUG00000006423	-	100	95.827	ENSMODG00000001036	POLR3A	100	95.827	Monodelphis_domestica
ENSTGUG00000006423	-	100	89.928	ENSMALG00000001249	polr3a	100	89.928	Monopterus_albus
ENSTGUG00000006423	-	100	95.540	MGP_CAROLIEiJ_G0019016	Polr3a	100	95.540	Mus_caroli
ENSTGUG00000006423	-	100	95.468	ENSMUSG00000025280	Polr3a	100	95.468	Mus_musculus
ENSTGUG00000006423	-	100	95.396	MGP_PahariEiJ_G0030029	Polr3a	100	95.396	Mus_pahari
ENSTGUG00000006423	-	100	92.950	MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	Mus_spretus
ENSTGUG00000006423	-	100	95.007	ENSMPUG00000003790	POLR3A	100	95.007	Mustela_putorius_furo
ENSTGUG00000006423	-	100	94.532	ENSMLUG00000011522	POLR3A	100	94.532	Myotis_lucifugus
ENSTGUG00000006423	-	100	93.525	ENSNGAG00000015863	Polr3a	100	93.525	Nannospalax_galili
ENSTGUG00000006423	-	100	88.561	ENSNBRG00000014262	polr3a	100	88.561	Neolamprologus_brichardi
ENSTGUG00000006423	-	88	88.454	ENSNLEG00000010501	POLR3A	92	88.454	Nomascus_leucogenys
ENSTGUG00000006423	-	99	83.055	ENSMEUG00000012446	POLR3A	100	83.055	Notamacropus_eugenii
ENSTGUG00000006423	-	100	90.647	ENSOPRG00000001880	-	100	90.647	Ochotona_princeps
ENSTGUG00000006423	-	100	94.029	ENSODEG00000015146	POLR3A	100	94.029	Octodon_degus
ENSTGUG00000006423	-	100	90.288	ENSONIG00000016129	polr3a	100	90.288	Oreochromis_niloticus
ENSTGUG00000006423	-	98	95.763	ENSOANG00000007013	POLR3A	100	95.763	Ornithorhynchus_anatinus
ENSTGUG00000006423	-	100	95.324	ENSOCUG00000012450	POLR3A	100	95.324	Oryctolagus_cuniculus
ENSTGUG00000006423	-	100	90.360	ENSORLG00000008958	polr3a	100	90.360	Oryzias_latipes
ENSTGUG00000006423	-	100	88.058	ENSORLG00020007525	polr3a	98	90.686	Oryzias_latipes_hni
ENSTGUG00000006423	-	100	90.216	ENSORLG00015006633	polr3a	100	90.216	Oryzias_latipes_hsok
ENSTGUG00000006423	-	100	89.568	ENSOMEG00000012865	polr3a	100	89.568	Oryzias_melastigma
ENSTGUG00000006423	-	100	95.540	ENSOGAG00000010995	POLR3A	100	95.540	Otolemur_garnettii
ENSTGUG00000006423	-	100	95.402	ENSOARG00000009656	POLR3A	100	95.402	Ovis_aries
ENSTGUG00000006423	-	100	95.971	ENSPPRG00000002128	POLR3A	100	95.971	Panthera_pardus
ENSTGUG00000006423	-	100	95.971	ENSPTIG00000020916	POLR3A	100	95.971	Panthera_tigris_altaica
ENSTGUG00000006423	-	100	95.755	ENSPTRG00000002664	POLR3A	100	95.755	Pan_troglodytes
ENSTGUG00000006423	-	100	95.612	ENSPANG00000022508	POLR3A	100	95.612	Papio_anubis
ENSTGUG00000006423	-	100	91.942	ENSPKIG00000008140	polr3a	100	91.942	Paramormyrops_kingsleyae
ENSTGUG00000006423	-	98	96.640	ENSPSIG00000002092	POLR3A	100	96.640	Pelodiscus_sinensis
ENSTGUG00000006423	-	100	95.396	ENSPEMG00000006768	Polr3a	100	95.396	Peromyscus_maniculatus_bairdii
ENSTGUG00000006423	-	100	95.683	ENSPCIG00000015842	POLR3A	100	95.683	Phascolarctos_cinereus
ENSTGUG00000006423	-	54	91.678	ENSPFOG00000006458	polr3a	100	91.678	Poecilia_formosa
ENSTGUG00000006423	-	100	90.360	ENSPLAG00000000997	polr3a	100	90.360	Poecilia_latipinna
ENSTGUG00000006423	-	100	90.288	ENSPMEG00000006821	polr3a	100	90.288	Poecilia_mexicana
ENSTGUG00000006423	-	100	90.072	ENSPREG00000002385	polr3a	100	90.072	Poecilia_reticulata
ENSTGUG00000006423	-	93	95.740	ENSPPYG00000002305	POLR3A	99	95.740	Pongo_abelii
ENSTGUG00000006423	-	84	82.443	ENSPCAG00000005690	POLR3A	87	82.443	Procavia_capensis
ENSTGUG00000006423	-	100	95.755	ENSPCOG00000028311	POLR3A	100	95.755	Propithecus_coquereli
ENSTGUG00000006423	-	100	94.388	ENSPVAG00000015553	POLR3A	100	94.388	Pteropus_vampyrus
ENSTGUG00000006423	-	100	89.856	ENSPNYG00000020987	polr3a	100	89.856	Pundamilia_nyererei
ENSTGUG00000006423	-	99	86.825	ENSPNAG00000006629	polr3a	99	86.825	Pygocentrus_nattereri
ENSTGUG00000006423	-	100	95.396	ENSRNOG00000010008	Polr3a	100	95.396	Rattus_norvegicus
ENSTGUG00000006423	-	100	91.583	ENSRBIG00000034967	POLR3A	98	96.203	Rhinopithecus_bieti
ENSTGUG00000006423	-	100	95.683	ENSRROG00000025527	POLR3A	100	95.683	Rhinopithecus_roxellana
ENSTGUG00000006423	-	98	50.035	YOR116C	RPO31	99	50.035	Saccharomyces_cerevisiae
ENSTGUG00000006423	-	100	95.755	ENSSBOG00000022199	POLR3A	100	95.755	Saimiri_boliviensis_boliviensis
ENSTGUG00000006423	-	100	95.540	ENSSHAG00000007588	POLR3A	94	95.540	Sarcophilus_harrisii
ENSTGUG00000006423	-	100	92.374	ENSSFOG00015014357	polr3a	100	92.374	Scleropages_formosus
ENSTGUG00000006423	-	100	89.928	ENSSMAG00000001780	polr3a	100	89.928	Scophthalmus_maximus
ENSTGUG00000006423	-	100	90.576	ENSSDUG00000019840	polr3a	100	90.576	Seriola_dumerili
ENSTGUG00000006423	-	100	90.576	ENSSLDG00000023908	polr3a	100	90.576	Seriola_lalandi_dorsalis
ENSTGUG00000006423	-	69	95.298	ENSSARG00000009916	POLR3A	89	95.298	Sorex_araneus
ENSTGUG00000006423	-	100	95.180	ENSSPUG00000013209	POLR3A	100	95.180	Sphenodon_punctatus
ENSTGUG00000006423	-	100	90.576	ENSSPAG00000017712	polr3a	100	90.576	Stegastes_partitus
ENSTGUG00000006423	-	100	95.755	ENSSSCG00000010327	POLR3A	100	95.847	Sus_scrofa
ENSTGUG00000006423	-	100	89.424	ENSTRUG00000013488	polr3a	100	89.424	Takifugu_rubripes
ENSTGUG00000006423	-	100	89.583	ENSTNIG00000013151	polr3a	100	89.583	Tetraodon_nigroviridis
ENSTGUG00000006423	-	71	94.681	ENSTBEG00000015288	POLR3A	75	94.681	Tupaia_belangeri
ENSTGUG00000006423	-	96	94.653	ENSTTRG00000007817	POLR3A	100	94.653	Tursiops_truncatus
ENSTGUG00000006423	-	100	93.381	ENSUAMG00000011283	POLR3A	100	93.381	Ursus_americanus
ENSTGUG00000006423	-	100	95.755	ENSUMAG00000013913	POLR3A	100	95.755	Ursus_maritimus
ENSTGUG00000006423	-	99	87.418	ENSVPAG00000003285	POLR3A	100	87.418	Vicugna_pacos
ENSTGUG00000006423	-	100	95.683	ENSVVUG00000025523	POLR3A	100	95.683	Vulpes_vulpes
ENSTGUG00000006423	-	86	92.815	ENSXETG00000018101	polr3a	100	92.815	Xenopus_tropicalis
ENSTGUG00000006423	-	100	90.072	ENSXMAG00000015213	polr3a	100	90.072	Xiphophorus_maculatus