EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTGUG00000006606 (Gene tree)
Gene ID
100219835
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Minus strand
Length
143224 bases
Position
chr7:11185855-11329078
Accession
100219835
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000006825RRM_1PF00076.225.5e-3312
ENSTGUP00000006825RRM_1PF00076.225.5e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000006893RBMS1-2011336-ENSTGUP00000006825403 (aa)XP_002196753H0Z8C2
Gene Model
Click here to download ENSTGUG00000006606's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006606's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTGUG00000006606RBMS17472.455ENSTGUG00000003572RBMS310072.455
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000006606RBMS110092.611ENSG00000153250RBMS110098.425Homo_sapiens
ENSTGUG00000006606RBMS18664.928ENSAPOG00000013761rbms1a8965.116Acanthochromis_polyacanthus
ENSTGUG00000006606RBMS18779.603ENSAPOG00000024437-9578.215Acanthochromis_polyacanthus
ENSTGUG00000006606RBMS19492.188ENSAMEG00000012661RBMS110092.188Ailuropoda_melanoleuca
ENSTGUG00000006606RBMS17465.772ENSACIG00000000113rbms1a8165.993Amphilophus_citrinellus
ENSTGUG00000006606RBMS19677.635ENSACIG00000021498RBMS19479.521Amphilophus_citrinellus
ENSTGUG00000006606RBMS18664.928ENSAOCG00000010066rbms1a8965.217Amphiprion_ocellaris
ENSTGUG00000006606RBMS19379.474ENSAOCG00000014482-9579.474Amphiprion_ocellaris
ENSTGUG00000006606RBMS19379.211ENSAPEG00000018371-9579.211Amphiprion_percula
ENSTGUG00000006606RBMS18964.444ENSAPEG00000023563rbms1a8965.217Amphiprion_percula
ENSTGUG00000006606RBMS19576.166ENSATEG00000018573RBMS18979.261Anabas_testudineus
ENSTGUG00000006606RBMS18965.278ENSATEG00000015450rbms1a8965.988Anabas_testudineus
ENSTGUG00000006606RBMS19899.494ENSAPLG00000007282RBMS110099.494Anas_platyrhynchos
ENSTGUG00000006606RBMS19594.560ENSACAG00000011984RBMS18094.560Anolis_carolinensis
ENSTGUG00000006606RBMS17992.236ENSANAG00000024424RBMS110092.236Aotus_nancymaae
ENSTGUG00000006606RBMS18665.029ENSACLG00000021512rbms1a9065.217Astatotilapia_calliptera
ENSTGUG00000006606RBMS19576.562ENSACLG00000013048RBMS19676.562Astatotilapia_calliptera
ENSTGUG00000006606RBMS110075.735ENSAMXG00000009969RBMS110074.755Astyanax_mexicanus
ENSTGUG00000006606RBMS18773.864ENSAMXG00000002146rbms1a8873.864Astyanax_mexicanus
ENSTGUG00000006606RBMS110090.284ENSBTAG00000005180RBMS110090.284Bos_taurus
ENSTGUG00000006606RBMS19187.705ENSCJAG00000022465-9887.335Callithrix_jacchus
ENSTGUG00000006606RBMS19987.032ENSCJAG00000012871-9990.617Callithrix_jacchus
ENSTGUG00000006606RBMS110092.857ENSCJAG00000014861-10092.857Callithrix_jacchus
ENSTGUG00000006606RBMS19592.188ENSCAFG00000009922RBMS19592.188Canis_familiaris
ENSTGUG00000006606RBMS110093.548ENSCAFG00020006120RBMS110093.548Canis_lupus_dingo
ENSTGUG00000006606RBMS110094.541ENSCHIG00000023380RBMS110094.541Capra_hircus
ENSTGUG00000006606RBMS110092.857ENSTSYG00000005584RBMS110092.857Carlito_syrichta
ENSTGUG00000006606RBMS110093.052ENSCPOG00000012310RBMS110093.052Cavia_porcellus
ENSTGUG00000006606RBMS110092.857ENSCCAG00000033841RBMS110092.857Cebus_capucinus
ENSTGUG00000006606RBMS110092.857ENSCATG00000043032RBMS110092.857Cercocebus_atys
ENSTGUG00000006606RBMS110093.300ENSCLAG00000003031RBMS110093.300Chinchilla_lanigera
ENSTGUG00000006606RBMS110092.857ENSCSAG00000015687RBMS110092.857Chlorocebus_sabaeus
ENSTGUG00000006606RBMS15495.522ENSCHOG00000001579RBMS17395.522Choloepus_hoffmanni
ENSTGUG00000006606RBMS110097.291ENSCPBG00000026455RBMS110097.291Chrysemys_picta_bellii
ENSTGUG00000006606RBMS110092.857ENSCANG00000042152RBMS110092.857Colobus_angolensis_palliatus
ENSTGUG00000006606RBMS110093.548ENSCGRG00001022833Rbms110093.548Cricetulus_griseus_chok1gshd
ENSTGUG00000006606RBMS110093.548ENSCGRG00000008824Rbms110093.548Cricetulus_griseus_crigri
ENSTGUG00000006606RBMS19474.870ENSCSEG00000010652RBMS19475.568Cynoglossus_semilaevis
ENSTGUG00000006606RBMS18962.778ENSCSEG00000000889rbms1a9063.372Cynoglossus_semilaevis
ENSTGUG00000006606RBMS19376.862ENSCVAG00000002027RBMS19678.409Cyprinodon_variegatus
ENSTGUG00000006606RBMS18965.278ENSCVAG00000014698rbms1a8965.698Cyprinodon_variegatus
ENSTGUG00000006606RBMS18774.148ENSDARG00000074023rbms1a8774.148Danio_rerio
ENSTGUG00000006606RBMS18788.587ENSDNOG00000040691RBMS19588.587Dasypus_novemcinctus
ENSTGUG00000006606RBMS110093.052ENSDORG00000007103Rbms110093.052Dipodomys_ordii
ENSTGUG00000006606RBMS19481.365ENSETEG00000012135RBMS110081.365Echinops_telfairi
ENSTGUG00000006606RBMS110089.336ENSEASG00005023132RBMS110089.336Equus_asinus_asinus
ENSTGUG00000006606RBMS110092.857ENSECAG00000019894RBMS110092.857Equus_caballus
ENSTGUG00000006606RBMS17997.087ENSEEUG00000005628RBMS17997.087Erinaceus_europaeus
ENSTGUG00000006606RBMS19165.860ENSELUG00000018923rbms1a9567.422Esox_lucius
ENSTGUG00000006606RBMS19372.105ENSELUG00000019328RBMS19472.105Esox_lucius
ENSTGUG00000006606RBMS110092.611ENSFCAG00000012524RBMS110092.611Felis_catus
ENSTGUG00000006606RBMS192100.000ENSFALG00000004440RBMS1100100.000Ficedula_albicollis
ENSTGUG00000006606RBMS110093.548ENSFDAG00000015692RBMS110093.548Fukomys_damarensis
ENSTGUG00000006606RBMS18965.556ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSTGUG00000006606RBMS19375.798ENSFHEG00000000720RBMS18977.557Fundulus_heteroclitus
ENSTGUG00000006606RBMS18262.974ENSGMOG00000000525rbms1a9961.972Gadus_morhua
ENSTGUG00000006606RBMS19499.736ENSGALG00000011132RBMS1100100.000Gallus_gallus
ENSTGUG00000006606RBMS18965.278ENSGAFG00000011633rbms1a9565.988Gambusia_affinis
ENSTGUG00000006606RBMS18776.989ENSGAFG00000007708RBMS18876.989Gambusia_affinis
ENSTGUG00000006606RBMS18776.771ENSGACG00000005671RBMS18976.989Gasterosteus_aculeatus
ENSTGUG00000006606RBMS18960.372ENSGACG00000015174rbms1a9166.563Gasterosteus_aculeatus
ENSTGUG00000006606RBMS110097.044ENSGAGG00000007866RBMS110097.044Gopherus_agassizii
ENSTGUG00000006606RBMS19589.583ENSGGOG00000043756-9589.583Gorilla_gorilla
ENSTGUG00000006606RBMS19691.282ENSGGOG00000001264RBMS19892.388Gorilla_gorilla
ENSTGUG00000006606RBMS18878.552ENSHBUG00000004516RBMS19478.552Haplochromis_burtoni
ENSTGUG00000006606RBMS18665.029ENSHBUG00000004802rbms1a9065.217Haplochromis_burtoni
ENSTGUG00000006606RBMS110092.804ENSHGLG00000010387RBMS110092.804Heterocephalus_glaber_female
ENSTGUG00000006606RBMS19889.447ENSHGLG00100014105RBMS110088.832Heterocephalus_glaber_male
ENSTGUG00000006606RBMS19374.468ENSHCOG00000016668RBMS19474.468Hippocampus_comes
ENSTGUG00000006606RBMS18963.611ENSHCOG00000020097rbms1a8964.244Hippocampus_comes
ENSTGUG00000006606RBMS18774.148ENSIPUG00000010131RBMS18874.148Ictalurus_punctatus
ENSTGUG00000006606RBMS110078.870ENSIPUG00000014677RBMS110076.904Ictalurus_punctatus
ENSTGUG00000006606RBMS110093.300ENSSTOG00000012501RBMS110093.300Ictidomys_tridecemlineatus
ENSTGUG00000006606RBMS110092.804ENSJJAG00000016543Rbms110092.804Jaculus_jaculus
ENSTGUG00000006606RBMS19379.255ENSKMAG00000013911RBMS19479.255Kryptolebias_marmoratus
ENSTGUG00000006606RBMS18963.712ENSKMAG00000011839-8964.348Kryptolebias_marmoratus
ENSTGUG00000006606RBMS18664.928ENSLBEG00000025962rbms1a8965.116Labrus_bergylta
ENSTGUG00000006606RBMS19378.723ENSLBEG00000005787RBMS19478.723Labrus_bergylta
ENSTGUG00000006606RBMS19980.244ENSLACG00000004324RBMS110079.038Latimeria_chalumnae
ENSTGUG00000006606RBMS19882.872ENSLOCG00000008622rbms1a9684.856Lepisosteus_oculatus
ENSTGUG00000006606RBMS19492.876ENSLAFG00000017217RBMS110092.876Loxodonta_africana
ENSTGUG00000006606RBMS110092.857ENSMFAG00000000274RBMS110092.857Macaca_fascicularis
ENSTGUG00000006606RBMS110092.857ENSMMUG00000016825RBMS110092.857Macaca_mulatta
ENSTGUG00000006606RBMS110092.857ENSMNEG00000039425RBMS110092.857Macaca_nemestrina
ENSTGUG00000006606RBMS19988.148ENSMLEG00000031517RBMS19992.408Mandrillus_leucophaeus
ENSTGUG00000006606RBMS18777.620ENSMAMG00000003159-9278.063Mastacembelus_armatus
ENSTGUG00000006606RBMS18962.778ENSMAMG00000005018rbms1a8963.372Mastacembelus_armatus
ENSTGUG00000006606RBMS18179.268ENSMZEG00005007313RBMS19179.511Maylandia_zebra
ENSTGUG00000006606RBMS18665.029ENSMZEG00005005661rbms1a9065.217Maylandia_zebra
ENSTGUG00000006606RBMS19299.196ENSMGAG00000011054RBMS110099.196Meleagris_gallopavo
ENSTGUG00000006606RBMS110093.052ENSMAUG00000008550Rbms110093.052Mesocricetus_auratus
ENSTGUG00000006606RBMS110093.103ENSMICG00000008325RBMS110093.103Microcebus_murinus
ENSTGUG00000006606RBMS110092.556ENSMOCG00000022617Rbms110092.556Microtus_ochrogaster
ENSTGUG00000006606RBMS19277.867ENSMMOG00000003707RBMS19477.867Mola_mola
ENSTGUG00000006606RBMS17468.350ENSMMOG00000018249rbms1a8169.463Mola_mola
ENSTGUG00000006606RBMS110096.526ENSMODG00000005250RBMS110096.526Monodelphis_domestica
ENSTGUG00000006606RBMS18280.299ENSMALG00000015715-9078.693Monopterus_albus
ENSTGUG00000006606RBMS18964.444ENSMALG00000014235rbms1a8965.116Monopterus_albus
ENSTGUG00000006606RBMS110092.060MGP_CAROLIEiJ_G0023586Rbms110092.060Mus_caroli
ENSTGUG00000006606RBMS110092.060ENSMUSG00000026970Rbms110092.060Mus_musculus
ENSTGUG00000006606RBMS110091.563MGP_PahariEiJ_G0025037Rbms110091.563Mus_pahari
ENSTGUG00000006606RBMS110092.308MGP_SPRETEiJ_G0024508Rbms110092.308Mus_spretus
ENSTGUG00000006606RBMS110090.215ENSMPUG00000000539RBMS110090.215Mustela_putorius_furo
ENSTGUG00000006606RBMS19985.203ENSMLUG00000008762RBMS19688.250Myotis_lucifugus
ENSTGUG00000006606RBMS110093.548ENSNGAG00000013636Rbms110093.548Nannospalax_galili
ENSTGUG00000006606RBMS18774.504ENSNBRG00000015151RBMS19474.716Neolamprologus_brichardi
ENSTGUG00000006606RBMS17468.439ENSNBRG00000020217rbms1a8568.667Neolamprologus_brichardi
ENSTGUG00000006606RBMS110092.611ENSNLEG00000001667RBMS110092.611Nomascus_leucogenys
ENSTGUG00000006606RBMS17982.609ENSMEUG00000000746RBMS110082.609Notamacropus_eugenii
ENSTGUG00000006606RBMS110086.453ENSOPRG00000012431RBMS110086.453Ochotona_princeps
ENSTGUG00000006606RBMS110093.300ENSODEG00000013934RBMS110093.300Octodon_degus
ENSTGUG00000006606RBMS19577.344ENSONIG00000008934RBMS19677.344Oreochromis_niloticus
ENSTGUG00000006606RBMS18665.896ENSONIG00000003329rbms1a8866.087Oreochromis_niloticus
ENSTGUG00000006606RBMS15357.676ENSOANG00000004477-9958.264Ornithorhynchus_anatinus
ENSTGUG00000006606RBMS19496.325ENSOANG00000006166RBMS19696.325Ornithorhynchus_anatinus
ENSTGUG00000006606RBMS19492.612ENSOCUG00000017365RBMS18992.612Oryctolagus_cuniculus
ENSTGUG00000006606RBMS18874.860ENSORLG00000016818RBMS18976.487Oryzias_latipes
ENSTGUG00000006606RBMS18963.056ENSORLG00000003917rbms1a9063.663Oryzias_latipes
ENSTGUG00000006606RBMS18874.581ENSORLG00020022335RBMS18976.204Oryzias_latipes_hni
ENSTGUG00000006606RBMS18962.778ENSORLG00020018663rbms1a9063.372Oryzias_latipes_hni
ENSTGUG00000006606RBMS18963.056ENSORLG00015016556rbms1a9063.663Oryzias_latipes_hsok
ENSTGUG00000006606RBMS18875.140ENSORLG00015018208RBMS18976.771Oryzias_latipes_hsok
ENSTGUG00000006606RBMS18975.346ENSOMEG00000002394RBMS19474.339Oryzias_melastigma
ENSTGUG00000006606RBMS18790.960ENSOGAG00000002900RBMS19490.960Otolemur_garnettii
ENSTGUG00000006606RBMS110094.541ENSOARG00000006870RBMS110094.541Ovis_aries
ENSTGUG00000006606RBMS19388.564ENSPPAG00000036520-9988.564Pan_paniscus
ENSTGUG00000006606RBMS19691.282ENSPPAG00000040083RBMS110092.147Pan_paniscus
ENSTGUG00000006606RBMS110092.611ENSPPRG00000005040RBMS110092.611Panthera_pardus
ENSTGUG00000006606RBMS19492.388ENSPTIG00000021240RBMS19492.837Panthera_tigris_altaica
ENSTGUG00000006606RBMS110092.611ENSPTRG00000052304RBMS110092.611Pan_troglodytes
ENSTGUG00000006606RBMS19588.860ENSPTRG00000039358-9988.831Pan_troglodytes
ENSTGUG00000006606RBMS110093.548ENSPANG00000001383RBMS110093.548Papio_anubis
ENSTGUG00000006606RBMS18779.545ENSPKIG00000012818rbms1a10075.556Paramormyrops_kingsleyae
ENSTGUG00000006606RBMS110078.973ENSPKIG00000001498rbms1a10077.017Paramormyrops_kingsleyae
ENSTGUG00000006606RBMS110097.767ENSPSIG00000010240RBMS110097.767Pelodiscus_sinensis
ENSTGUG00000006606RBMS18661.272ENSPMGG00000004341rbms1a9061.449Periophthalmus_magnuspinnatus
ENSTGUG00000006606RBMS18178.248ENSPMGG00000006310RBMS19570.445Periophthalmus_magnuspinnatus
ENSTGUG00000006606RBMS110093.300ENSPEMG00000009449Rbms110093.300Peromyscus_maniculatus_bairdii
ENSTGUG00000006606RBMS110096.526ENSPCIG00000018405RBMS110096.526Phascolarctos_cinereus
ENSTGUG00000006606RBMS18965.278ENSPFOG00000016116rbms1a8965.988Poecilia_formosa
ENSTGUG00000006606RBMS19873.684ENSPFOG00000017483RBMS19476.862Poecilia_formosa
ENSTGUG00000006606RBMS18776.989ENSPLAG00000000920RBMS18876.989Poecilia_latipinna
ENSTGUG00000006606RBMS18965.278ENSPLAG00000013864rbms1a8965.988Poecilia_latipinna
ENSTGUG00000006606RBMS18965.278ENSPMEG00000016185rbms1a8965.988Poecilia_mexicana
ENSTGUG00000006606RBMS19376.862ENSPMEG00000015838RBMS19476.862Poecilia_mexicana
ENSTGUG00000006606RBMS19377.128ENSPREG00000008146RBMS19477.128Poecilia_reticulata
ENSTGUG00000006606RBMS18965.278ENSPREG00000020161rbms1a8965.988Poecilia_reticulata
ENSTGUG00000006606RBMS110088.863ENSPPYG00000012879-10088.863Pongo_abelii
ENSTGUG00000006606RBMS110087.192ENSPCAG00000009673RBMS110087.192Procavia_capensis
ENSTGUG00000006606RBMS110093.103ENSPCOG00000027294RBMS110093.103Propithecus_coquereli
ENSTGUG00000006606RBMS110081.527ENSPVAG00000010429RBMS110081.527Pteropus_vampyrus
ENSTGUG00000006606RBMS19577.083ENSPNYG00000002643RBMS19677.083Pundamilia_nyererei
ENSTGUG00000006606RBMS110076.961ENSPNAG00000023479RBMS110075.980Pygocentrus_nattereri
ENSTGUG00000006606RBMS18774.432ENSPNAG00000010225rbms1a8874.432Pygocentrus_nattereri
ENSTGUG00000006606RBMS110092.804ENSRNOG00000008482Rbms110092.804Rattus_norvegicus
ENSTGUG00000006606RBMS110092.857ENSRBIG00000044262RBMS110092.857Rhinopithecus_bieti
ENSTGUG00000006606RBMS110089.336ENSRROG00000043108RBMS19992.670Rhinopithecus_roxellana
ENSTGUG00000006606RBMS19491.667ENSSBOG00000034705RBMS19991.667Saimiri_boliviensis_boliviensis
ENSTGUG00000006606RBMS110096.278ENSSHAG00000012271RBMS110096.278Sarcophilus_harrisii
ENSTGUG00000006606RBMS18779.830ENSSFOG00015014493rbms1a9579.830Scleropages_formosus
ENSTGUG00000006606RBMS19981.235ENSSFOG00015022929rbms19980.247Scleropages_formosus
ENSTGUG00000006606RBMS18664.348ENSSMAG00000012722rbms1a9564.535Scophthalmus_maximus
ENSTGUG00000006606RBMS18776.771ENSSMAG00000012152RBMS19478.063Scophthalmus_maximus
ENSTGUG00000006606RBMS19379.787ENSSDUG00000018803RBMS19479.787Seriola_dumerili
ENSTGUG00000006606RBMS18964.722ENSSDUG00000020602rbms1a9565.507Seriola_dumerili
ENSTGUG00000006606RBMS18964.722ENSSLDG00000009495rbms1a8965.407Seriola_lalandi_dorsalis
ENSTGUG00000006606RBMS19379.521ENSSLDG00000016556RBMS19479.521Seriola_lalandi_dorsalis
ENSTGUG00000006606RBMS110065.517ENSSARG00000011085RBMS110065.517Sorex_araneus
ENSTGUG00000006606RBMS19297.059ENSSPUG00000017163RBMS110097.059Sphenodon_punctatus
ENSTGUG00000006606RBMS18664.638ENSSPAG00000005371rbms1a8964.826Stegastes_partitus
ENSTGUG00000006606RBMS19380.053ENSSPAG00000000059RBMS19480.053Stegastes_partitus
ENSTGUG00000006606RBMS110090.453ENSSSCG00000015888RBMS110090.453Sus_scrofa
ENSTGUG00000006606RBMS18564.035ENSTRUG00000017155rbms1a8964.638Takifugu_rubripes
ENSTGUG00000006606RBMS18776.487ENSTRUG00000005466-9673.834Takifugu_rubripes
ENSTGUG00000006606RBMS19376.393ENSTNIG00000016496RBMS110076.393Tetraodon_nigroviridis
ENSTGUG00000006606RBMS18762.393ENSTNIG00000009477rbms1a9962.539Tetraodon_nigroviridis
ENSTGUG00000006606RBMS19483.990ENSTBEG00000016156RBMS110083.990Tupaia_belangeri
ENSTGUG00000006606RBMS19492.651ENSTTRG00000011058RBMS110092.651Tursiops_truncatus
ENSTGUG00000006606RBMS110093.548ENSUAMG00000022331RBMS110093.548Ursus_americanus
ENSTGUG00000006606RBMS19493.158ENSUMAG00000008605RBMS19893.158Ursus_maritimus
ENSTGUG00000006606RBMS19491.601ENSVPAG00000002716RBMS110090.551Vicugna_pacos
ENSTGUG00000006606RBMS110089.976ENSVVUG00000018682RBMS110089.976Vulpes_vulpes
ENSTGUG00000006606RBMS19484.856ENSXETG00000016204rbms110084.073Xenopus_tropicalis
ENSTGUG00000006606RBMS18962.222ENSXCOG00000001659rbms1a8962.791Xiphophorus_couchianus
ENSTGUG00000006606RBMS18776.989ENSXCOG00000000211RBMS19576.989Xiphophorus_couchianus
ENSTGUG00000006606RBMS18965.278ENSXMAG00000001802rbms1a8965.988Xiphophorus_maculatus
ENSTGUG00000006606RBMS19376.862ENSXMAG00000011405RBMS19476.862Xiphophorus_maculatus

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