EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000006781 (Gene tree)
Gene ID: 100226242
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 7835 bases
Position: chr4A:19721398-19729232
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000006995	TruB_N	PF01509.18	8.8e-21	1	1
ENSTGUP00000006983	TruB_N	PF01509.18	8.9e-21	1	1
ENSTGUP00000006983	PUA	PF01472.20	8.8e-18	1	1
ENSTGUP00000006995	PUA	PF01472.20	2e-17	1	1
ENSTGUP00000006995	DKCLD	PF08068.12	1.4e-25	1	1
ENSTGUP00000006983	DKCLD	PF08068.12	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007064	DKC1-202	1356	-	ENSTGUP00000006995	451 (aa)	-	H0Z8U2
ENSTGUT00000007052	DKC1-201	1383	-	ENSTGUP00000006983	460 (aa)	-	H0Z8T0

Gene Model

Click here to download ENSTGUG00000006781's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006781	DKC1	100	81.681	ENSG00000130826	DKC1	99	89.806	Homo_sapiens
ENSTGUG00000006781	DKC1	88	85.250	ENSAPOG00000007799	dkc1	78	85.570	Acanthochromis_polyacanthus
ENSTGUG00000006781	DKC1	89	85.360	ENSAMEG00000002776	DKC1	79	85.786	Ailuropoda_melanoleuca
ENSTGUG00000006781	DKC1	91	82.775	ENSACIG00000022614	dkc1	83	85.139	Amphilophus_citrinellus
ENSTGUG00000006781	DKC1	88	85.000	ENSAOCG00000013159	dkc1	85	81.971	Amphiprion_ocellaris
ENSTGUG00000006781	DKC1	88	85.000	ENSAPEG00000002284	dkc1	85	81.971	Amphiprion_percula
ENSTGUG00000006781	DKC1	88	82.725	ENSATEG00000013682	dkc1	77	84.987	Anabas_testudineus
ENSTGUG00000006781	DKC1	89	86.567	ENSACAG00000015600	DKC1	69	86.650	Anolis_carolinensis
ENSTGUG00000006781	DKC1	94	83.759	ENSANAG00000022732	DKC1	78	86.500	Aotus_nancymaae
ENSTGUG00000006781	DKC1	80	91.460	ENSACLG00000015605	dkc1	74	91.460	Astatotilapia_calliptera
ENSTGUG00000006781	DKC1	89	85.572	ENSAMXG00000017108	dkc1	72	90.884	Astyanax_mexicanus
ENSTGUG00000006781	DKC1	88	85.176	ENSBTAG00000013045	DKC1	79	85.427	Bos_taurus
ENSTGUG00000006781	DKC1	83	67.380	WBGene00010478	K01G5.5	89	64.736	Caenorhabditis_elegans
ENSTGUG00000006781	DKC1	100	81.681	ENSCJAG00000004210	DKC1	78	85.750	Callithrix_jacchus
ENSTGUG00000006781	DKC1	89	73.966	ENSCAFG00000009311	-	79	75.561	Canis_familiaris
ENSTGUG00000006781	DKC1	89	82.567	ENSCAFG00000019620	-	79	83.538	Canis_familiaris
ENSTGUG00000006781	DKC1	89	73.464	ENSCAFG00020009379	-	75	75.063	Canis_lupus_dingo
ENSTGUG00000006781	DKC1	89	82.567	ENSCAFG00020008918	-	79	83.538	Canis_lupus_dingo
ENSTGUG00000006781	DKC1	88	85.176	ENSCHIG00000017392	DKC1	79	85.427	Capra_hircus
ENSTGUG00000006781	DKC1	89	84.146	ENSTSYG00000007681	DKC1	78	84.314	Carlito_syrichta
ENSTGUG00000006781	DKC1	89	85.250	ENSCAPG00000003342	DKC1	91	85.037	Cavia_aperea
ENSTGUG00000006781	DKC1	100	81.798	ENSCPOG00000008825	DKC1	78	86.432	Cavia_porcellus
ENSTGUG00000006781	DKC1	100	73.060	ENSCCAG00000027418	DKC1	76	75.750	Cebus_capucinus
ENSTGUG00000006781	DKC1	100	81.897	ENSCATG00000033602	DKC1	78	86.000	Cercocebus_atys
ENSTGUG00000006781	DKC1	100	81.897	ENSCLAG00000000720	DKC1	79	86.500	Chinchilla_lanigera
ENSTGUG00000006781	DKC1	100	81.897	ENSCSAG00000006706	DKC1	78	86.000	Chlorocebus_sabaeus
ENSTGUG00000006781	DKC1	97	86.966	ENSCPBG00000005858	DKC1	89	87.041	Chrysemys_picta_bellii
ENSTGUG00000006781	DKC1	87	77.157	ENSCING00000004599	-	77	76.190	Ciona_intestinalis
ENSTGUG00000006781	DKC1	79	83.944	ENSCSAVG00000010047	-	89	78.030	Ciona_savignyi
ENSTGUG00000006781	DKC1	100	81.897	ENSCANG00000027987	DKC1	78	86.000	Colobus_angolensis_palliatus
ENSTGUG00000006781	DKC1	100	80.921	ENSCGRG00001014574	-	78	85.000	Cricetulus_griseus_chok1gshd
ENSTGUG00000006781	DKC1	73	69.512	ENSCGRG00001016789	-	73	69.512	Cricetulus_griseus_chok1gshd
ENSTGUG00000006781	DKC1	100	80.921	ENSCGRG00000016075	-	78	85.000	Cricetulus_griseus_crigri
ENSTGUG00000006781	DKC1	73	69.512	ENSCGRG00000014809	-	72	69.512	Cricetulus_griseus_crigri
ENSTGUG00000006781	DKC1	95	80.549	ENSCSEG00000012633	dkc1	87	83.333	Cynoglossus_semilaevis
ENSTGUG00000006781	DKC1	88	83.416	ENSCVAG00000010155	dkc1	76	85.427	Cyprinodon_variegatus
ENSTGUG00000006781	DKC1	87	86.005	ENSDARG00000016484	dkc1	80	83.251	Danio_rerio
ENSTGUG00000006781	DKC1	89	86.750	ENSDNOG00000004218	DKC1	78	87.250	Dasypus_novemcinctus
ENSTGUG00000006781	DKC1	54	75.720	ENSDORG00000013566	-	78	75.720	Dipodomys_ordii
ENSTGUG00000006781	DKC1	90	69.853	FBgn0259937	Nop60B	78	71.537	Drosophila_melanogaster
ENSTGUG00000006781	DKC1	89	82.500	ENSETEG00000016095	DKC1	81	82.915	Echinops_telfairi
ENSTGUG00000006781	DKC1	64	82.699	ENSEBUG00000015962	dkc1	98	82.699	Eptatretus_burgeri
ENSTGUG00000006781	DKC1	100	79.310	ENSEASG00005007484	DKC1	78	84.029	Equus_asinus_asinus
ENSTGUG00000006781	DKC1	100	79.310	ENSECAG00000023524	DKC1	78	84.029	Equus_caballus
ENSTGUG00000006781	DKC1	88	85.427	ENSEEUG00000003323	DKC1	94	85.930	Erinaceus_europaeus
ENSTGUG00000006781	DKC1	91	83.902	ENSELUG00000014538	dkc1	81	85.323	Esox_lucius
ENSTGUG00000006781	DKC1	89	84.367	ENSFCAG00000006577	DKC1	78	85.390	Felis_catus
ENSTGUG00000006781	DKC1	100	94.647	ENSFALG00000011496	DKC1	89	94.647	Ficedula_albicollis
ENSTGUG00000006781	DKC1	97	80.361	ENSFDAG00000002516	DKC1	90	80.088	Fukomys_damarensis
ENSTGUG00000006781	DKC1	90	84.938	ENSFHEG00000004627	dkc1	78	86.181	Fundulus_heteroclitus
ENSTGUG00000006781	DKC1	80	90.608	ENSGMOG00000017277	dkc1	93	90.608	Gadus_morhua
ENSTGUG00000006781	DKC1	95	95.195	ENSGALG00000005054	DKC1	89	94.143	Gallus_gallus
ENSTGUG00000006781	DKC1	99	78.043	ENSGAFG00000011486	dkc1	77	79.476	Gambusia_affinis
ENSTGUG00000006781	DKC1	80	89.779	ENSGACG00000004373	dkc1	96	89.362	Gasterosteus_aculeatus
ENSTGUG00000006781	DKC1	97	88.090	ENSGAGG00000011330	DKC1	89	88.121	Gopherus_agassizii
ENSTGUG00000006781	DKC1	100	81.681	ENSGGOG00000001045	DKC1	78	85.750	Gorilla_gorilla
ENSTGUG00000006781	DKC1	95	81.321	ENSHBUG00000012436	dkc1	78	86.146	Haplochromis_burtoni
ENSTGUG00000006781	DKC1	94	83.105	ENSHGLG00000000649	DKC1	77	85.930	Heterocephalus_glaber_female
ENSTGUG00000006781	DKC1	94	83.105	ENSHGLG00100001153	DKC1	78	85.930	Heterocephalus_glaber_male
ENSTGUG00000006781	DKC1	88	83.251	ENSHCOG00000021099	dkc1	77	86.005	Hippocampus_comes
ENSTGUG00000006781	DKC1	89	84.788	ENSIPUG00000010309	dkc1	77	84.673	Ictalurus_punctatus
ENSTGUG00000006781	DKC1	89	85.037	ENSSTOG00000001074	-	82	85.213	Ictidomys_tridecemlineatus
ENSTGUG00000006781	DKC1	89	77.250	ENSSTOG00000020149	-	77	77.193	Ictidomys_tridecemlineatus
ENSTGUG00000006781	DKC1	96	71.041	ENSSTOG00000011904	-	74	73.383	Ictidomys_tridecemlineatus
ENSTGUG00000006781	DKC1	54	75.720	ENSJJAG00000010086	-	78	75.720	Jaculus_jaculus
ENSTGUG00000006781	DKC1	88	83.123	ENSKMAG00000008010	dkc1	77	83.797	Kryptolebias_marmoratus
ENSTGUG00000006781	DKC1	88	83.416	ENSLBEG00000019122	dkc1	79	86.822	Labrus_bergylta
ENSTGUG00000006781	DKC1	89	84.500	ENSLACG00000014025	DKC1	82	90.884	Latimeria_chalumnae
ENSTGUG00000006781	DKC1	89	85.644	ENSLOCG00000013713	dkc1	82	86.250	Lepisosteus_oculatus
ENSTGUG00000006781	DKC1	88	84.962	ENSLAFG00000000221	DKC1	78	85.213	Loxodonta_africana
ENSTGUG00000006781	DKC1	100	81.681	ENSMFAG00000032398	DKC1	67	85.750	Macaca_fascicularis
ENSTGUG00000006781	DKC1	100	81.897	ENSMMUG00000005768	DKC1	78	86.000	Macaca_mulatta
ENSTGUG00000006781	DKC1	100	81.897	ENSMNEG00000034503	DKC1	78	86.000	Macaca_nemestrina
ENSTGUG00000006781	DKC1	100	81.897	ENSMLEG00000034422	DKC1	78	86.000	Mandrillus_leucophaeus
ENSTGUG00000006781	DKC1	81	91.553	ENSMAMG00000005427	dkc1	82	91.848	Mastacembelus_armatus
ENSTGUG00000006781	DKC1	95	81.549	ENSMZEG00005014503	dkc1	78	86.398	Maylandia_zebra
ENSTGUG00000006781	DKC1	100	94.360	ENSMGAG00000009238	DKC1	100	94.360	Meleagris_gallopavo
ENSTGUG00000006781	DKC1	54	75.309	ENSMAUG00000016454	-	78	75.309	Mesocricetus_auratus
ENSTGUG00000006781	DKC1	96	79.605	ENSMICG00000038751	-	79	84.596	Microcebus_murinus
ENSTGUG00000006781	DKC1	96	74.049	ENSMICG00000002818	-	99	78.022	Microcebus_murinus
ENSTGUG00000006781	DKC1	54	72.016	ENSMOCG00000001169	-	78	72.016	Microtus_ochrogaster
ENSTGUG00000006781	DKC1	80	90.634	ENSMMOG00000020348	dkc1	81	89.037	Mola_mola
ENSTGUG00000006781	DKC1	90	82.921	ENSMODG00000009243	DKC1	69	84.557	Monodelphis_domestica
ENSTGUG00000006781	DKC1	89	84.000	ENSMALG00000009454	dkc1	80	83.210	Monopterus_albus
ENSTGUG00000006781	DKC1	100	70.996	MGP_CAROLIEiJ_G0033191	Dkc1	63	92.391	Mus_caroli
ENSTGUG00000006781	DKC1	100	81.416	ENSMUSG00000031403	Dkc1	89	81.416	Mus_musculus
ENSTGUG00000006781	DKC1	99	80.837	MGP_PahariEiJ_G0031735	Dkc1	78	85.427	Mus_pahari
ENSTGUG00000006781	DKC1	100	81.678	MGP_SPRETEiJ_G0034351	Dkc1	89	81.898	Mus_spretus
ENSTGUG00000006781	DKC1	88	84.275	ENSMPUG00000016136	DKC1	76	84.521	Mustela_putorius_furo
ENSTGUG00000006781	DKC1	90	78.019	ENSMLUG00000011918	DKC1	77	80.250	Myotis_lucifugus
ENSTGUG00000006781	DKC1	54	75.720	ENSNGAG00000015724	-	78	75.720	Nannospalax_galili
ENSTGUG00000006781	DKC1	80	92.011	ENSNBRG00000005638	dkc1	79	86.923	Neolamprologus_brichardi
ENSTGUG00000006781	DKC1	100	81.897	ENSNLEG00000014323	DKC1	78	86.000	Nomascus_leucogenys
ENSTGUG00000006781	DKC1	88	80.808	ENSMEUG00000001066	DKC1	86	80.808	Notamacropus_eugenii
ENSTGUG00000006781	DKC1	63	91.901	ENSOPRG00000005248	DKC1	57	91.901	Ochotona_princeps
ENSTGUG00000006781	DKC1	54	75.720	ENSODEG00000000549	-	78	75.720	Octodon_degus
ENSTGUG00000006781	DKC1	84	88.064	ENSODEG00000011816	-	78	86.500	Octodon_degus
ENSTGUG00000006781	DKC1	88	84.938	ENSONIG00000013889	dkc1	72	91.713	Oreochromis_niloticus
ENSTGUG00000006781	DKC1	75	63.408	ENSOANG00000022295	-	99	63.510	Ornithorhynchus_anatinus
ENSTGUG00000006781	DKC1	99	84.565	ENSOANG00000008713	-	95	84.565	Ornithorhynchus_anatinus
ENSTGUG00000006781	DKC1	98	81.757	ENSOCUG00000012646	DKC1	89	80.879	Oryctolagus_cuniculus
ENSTGUG00000006781	DKC1	88	83.251	ENSORLG00000018748	dkc1	72	90.083	Oryzias_latipes
ENSTGUG00000006781	DKC1	90	83.704	ENSOMEG00000005786	dkc1	70	90.732	Oryzias_melastigma
ENSTGUG00000006781	DKC1	99	79.618	ENSOGAG00000003399	DKC1	78	84.559	Otolemur_garnettii
ENSTGUG00000006781	DKC1	88	85.176	ENSOARG00000003047	DKC1	79	85.427	Ovis_aries
ENSTGUG00000006781	DKC1	87	85.714	ENSPPAG00000023820	DKC1	78	86.000	Pan_paniscus
ENSTGUG00000006781	DKC1	89	84.367	ENSPPRG00000009104	DKC1	78	85.390	Panthera_pardus
ENSTGUG00000006781	DKC1	89	83.623	ENSPTIG00000017469	DKC1	78	85.496	Panthera_tigris_altaica
ENSTGUG00000006781	DKC1	89	85.250	ENSPTRG00000043416	-	68	85.750	Pan_troglodytes
ENSTGUG00000006781	DKC1	100	81.681	ENSPTRG00000022449	DKC1	78	85.750	Pan_troglodytes
ENSTGUG00000006781	DKC1	100	81.897	ENSPANG00000011978	DKC1	78	86.000	Papio_anubis
ENSTGUG00000006781	DKC1	88	86.935	ENSPKIG00000008443	dkc1	77	92.562	Paramormyrops_kingsleyae
ENSTGUG00000006781	DKC1	73	94.529	ENSPSIG00000013765	DKC1	79	94.529	Pelodiscus_sinensis
ENSTGUG00000006781	DKC1	87	78.450	ENSPMGG00000004097	dkc1	66	85.399	Periophthalmus_magnuspinnatus
ENSTGUG00000006781	DKC1	69	91.304	ENSPEMG00000013348	Dkc1	73	91.304	Peromyscus_maniculatus_bairdii
ENSTGUG00000006781	DKC1	80	90.608	ENSPCIG00000016706	DKC1	67	85.606	Phascolarctos_cinereus
ENSTGUG00000006781	DKC1	99	78.821	ENSPFOG00000018653	dkc1	89	78.166	Poecilia_formosa
ENSTGUG00000006781	DKC1	99	78.821	ENSPLAG00000003272	dkc1	80	78.166	Poecilia_latipinna
ENSTGUG00000006781	DKC1	90	85.185	ENSPMEG00000010413	dkc1	78	85.930	Poecilia_mexicana
ENSTGUG00000006781	DKC1	99	78.478	ENSPREG00000004100	dkc1	77	85.678	Poecilia_reticulata
ENSTGUG00000006781	DKC1	100	81.466	ENSPPYG00000020892	DKC1	79	85.750	Pongo_abelii
ENSTGUG00000006781	DKC1	84	87.533	ENSPCAG00000015034	DKC1	73	88.472	Procavia_capensis
ENSTGUG00000006781	DKC1	96	82.063	ENSPCOG00000026874	DKC1	78	85.750	Propithecus_coquereli
ENSTGUG00000006781	DKC1	94	80.139	ENSPVAG00000009222	DKC1	77	84.987	Pteropus_vampyrus
ENSTGUG00000006781	DKC1	89	84.367	ENSPNYG00000020063	dkc1	80	85.500	Pundamilia_nyererei
ENSTGUG00000006781	DKC1	90	84.767	ENSPNAG00000005780	dkc1	78	85.678	Pygocentrus_nattereri
ENSTGUG00000006781	DKC1	94	78.899	ENSRNOG00000055562	Dkc1	79	83.042	Rattus_norvegicus
ENSTGUG00000006781	DKC1	100	81.897	ENSRBIG00000028457	DKC1	67	86.000	Rhinopithecus_bieti
ENSTGUG00000006781	DKC1	100	81.897	ENSRROG00000044780	DKC1	78	86.000	Rhinopithecus_roxellana
ENSTGUG00000006781	DKC1	83	71.850	YLR175W	-	83	68.329	Saccharomyces_cerevisiae
ENSTGUG00000006781	DKC1	89	85.500	ENSSBOG00000033746	DKC1	78	86.000	Saimiri_boliviensis_boliviensis
ENSTGUG00000006781	DKC1	90	84.198	ENSSHAG00000002463	DKC1	84	85.427	Sarcophilus_harrisii
ENSTGUG00000006781	DKC1	91	83.455	ENSSFOG00015009585	dkc1	76	86.923	Scleropages_formosus
ENSTGUG00000006781	DKC1	92	81.598	ENSSMAG00000002552	dkc1	82	82.716	Scophthalmus_maximus
ENSTGUG00000006781	DKC1	95	80.092	ENSSDUG00000009963	dkc1	77	86.041	Seriola_dumerili
ENSTGUG00000006781	DKC1	95	80.866	ENSSLDG00000019342	dkc1	84	84.577	Seriola_lalandi_dorsalis
ENSTGUG00000006781	DKC1	94	77.541	ENSSARG00000001822	DKC1	79	80.653	Sorex_araneus
ENSTGUG00000006781	DKC1	100	82.415	ENSSPUG00000018907	DKC1	77	86.207	Sphenodon_punctatus
ENSTGUG00000006781	DKC1	88	83.911	ENSSPAG00000002585	dkc1	78	83.538	Stegastes_partitus
ENSTGUG00000006781	DKC1	88	82.801	ENSSSCG00000012823	DKC1	81	86.528	Sus_scrofa
ENSTGUG00000006781	DKC1	89	84.367	ENSTRUG00000004413	dkc1	73	91.436	Takifugu_rubripes
ENSTGUG00000006781	DKC1	90	67.883	ENSTNIG00000002582	dkc1	79	68.069	Tetraodon_nigroviridis
ENSTGUG00000006781	DKC1	66	83.612	ENSTBEG00000011262	DKC1	85	82.468	Tupaia_belangeri
ENSTGUG00000006781	DKC1	94	79.582	ENSUAMG00000022721	DKC1	82	86.632	Ursus_americanus
ENSTGUG00000006781	DKC1	94	79.118	ENSUMAG00000016899	DKC1	96	84.224	Ursus_maritimus
ENSTGUG00000006781	DKC1	89	80.660	ENSVVUG00000020734	-	71	82.367	Vulpes_vulpes
ENSTGUG00000006781	DKC1	83	72.074	ENSVVUG00000021671	-	68	72.849	Vulpes_vulpes
ENSTGUG00000006781	DKC1	94	82.742	ENSXETG00000032517	DKC1	80	84.559	Xenopus_tropicalis
ENSTGUG00000006781	DKC1	89	82.968	ENSXCOG00000005498	dkc1	84	85.176	Xiphophorus_couchianus
ENSTGUG00000006781	DKC1	99	78.603	ENSXMAG00000004919	dkc1	90	78.867	Xiphophorus_maculatus