EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000006889 (Gene tree)
Gene ID: 100225885
Gene Symbol: -
Alias: -
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 13561 bases
Position: chr17:10016421-10029981
Accession: 100225885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007126	zf-CCCH	PF00642.24	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007196	-	3576	XM_012578379	ENSTGUP00000007126	1191 (aa)	XP_002189968	H0Z973

Gene Model

Click here to download ENSTGUG00000006889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000006889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000006889	-	93	51.644	ENSTGUG00000004090	RC3H1	97	51.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000006889	-	100	90.544	ENSG00000056586	RC3H2	95	98.896	Homo_sapiens
ENSTGUG00000006889	-	92	57.581	ENSAPOG00000002117	rc3h2	93	57.581	Acanthochromis_polyacanthus
ENSTGUG00000006889	-	100	91.213	ENSAMEG00000006498	RC3H2	100	91.213	Ailuropoda_melanoleuca
ENSTGUG00000006889	-	92	57.756	ENSAPEG00000007757	rc3h2	93	57.756	Amphiprion_percula
ENSTGUG00000006889	-	91	57.409	ENSATEG00000019414	rc3h2	91	56.991	Anabas_testudineus
ENSTGUG00000006889	-	100	98.741	ENSAPLG00000013920	RC3H2	100	98.741	Anas_platyrhynchos
ENSTGUG00000006889	-	100	90.628	ENSANAG00000030862	RC3H2	95	98.896	Aotus_nancymaae
ENSTGUG00000006889	-	91	57.118	ENSACLG00000023136	rc3h2	92	56.991	Astatotilapia_calliptera
ENSTGUG00000006889	-	81	59.340	ENSAMXG00000006778	rc3h2	94	63.325	Astyanax_mexicanus
ENSTGUG00000006889	-	100	91.031	ENSBTAG00000023867	RC3H2	100	91.031	Bos_taurus
ENSTGUG00000006889	-	100	90.628	ENSCJAG00000020050	RC3H2	95	98.896	Callithrix_jacchus
ENSTGUG00000006889	-	100	91.282	ENSCAFG00020015288	RC3H2	95	98.896	Canis_lupus_dingo
ENSTGUG00000006889	-	100	91.282	ENSCHIG00000019319	RC3H2	100	91.282	Capra_hircus
ENSTGUG00000006889	-	84	75.797	ENSCAPG00000017086	RC3H2	93	75.797	Cavia_aperea
ENSTGUG00000006889	-	100	90.612	ENSCPOG00000008511	RC3H2	100	90.612	Cavia_porcellus
ENSTGUG00000006889	-	100	90.612	ENSCCAG00000001404	RC3H2	95	98.896	Cebus_capucinus
ENSTGUG00000006889	-	100	90.628	ENSCATG00000036655	RC3H2	95	98.896	Cercocebus_atys
ENSTGUG00000006889	-	100	90.780	ENSCLAG00000013261	RC3H2	100	90.780	Chinchilla_lanigera
ENSTGUG00000006889	-	89	89.775	ENSCSAG00000013416	RC3H2	100	89.775	Chlorocebus_sabaeus
ENSTGUG00000006889	-	100	94.626	ENSCPBG00000009811	RC3H2	100	94.626	Chrysemys_picta_bellii
ENSTGUG00000006889	-	100	90.628	ENSCANG00000043140	RC3H2	95	98.896	Colobus_angolensis_palliatus
ENSTGUG00000006889	-	100	89.355	ENSCGRG00001010006	Rc3h2	100	88.842	Cricetulus_griseus_chok1gshd
ENSTGUG00000006889	-	90	89.988	ENSCGRG00000009255	Rc3h2	100	89.242	Cricetulus_griseus_crigri
ENSTGUG00000006889	-	90	56.390	ENSCSEG00000017460	rc3h2	96	56.798	Cynoglossus_semilaevis
ENSTGUG00000006889	-	91	56.436	ENSCVAG00000012202	rc3h2	91	56.087	Cyprinodon_variegatus
ENSTGUG00000006889	-	91	55.658	ENSDARG00000063050	rc3h2	96	55.106	Danio_rerio
ENSTGUG00000006889	-	100	91.031	ENSDNOG00000014557	RC3H2	100	91.031	Dasypus_novemcinctus
ENSTGUG00000006889	-	100	90.193	ENSDORG00000006398	Rc3h2	100	90.193	Dipodomys_ordii
ENSTGUG00000006889	-	100	88.349	ENSEASG00005020897	RC3H2	100	88.349	Equus_asinus_asinus
ENSTGUG00000006889	-	100	91.199	ENSECAG00000022176	RC3H2	100	91.199	Equus_caballus
ENSTGUG00000006889	-	91	58.893	ENSELUG00000006105	rc3h2	93	58.492	Esox_lucius
ENSTGUG00000006889	-	100	91.199	ENSFCAG00000007375	RC3H2	100	91.199	Felis_catus
ENSTGUG00000006889	-	100	99.244	ENSFALG00000002011	RC3H2	100	99.244	Ficedula_albicollis
ENSTGUG00000006889	-	100	90.780	ENSFDAG00000012477	RC3H2	100	90.780	Fukomys_damarensis
ENSTGUG00000006889	-	92	56.139	ENSFHEG00000012272	rc3h2	93	56.139	Fundulus_heteroclitus
ENSTGUG00000006889	-	65	53.015	ENSGMOG00000016709	-	100	53.208	Gadus_morhua
ENSTGUG00000006889	-	100	98.573	ENSGALG00000001253	RC3H2	100	98.573	Gallus_gallus
ENSTGUG00000006889	-	92	56.278	ENSGAFG00000007679	rc3h2	96	55.911	Gambusia_affinis
ENSTGUG00000006889	-	70	59.954	ENSGACG00000017369	rc3h2	100	87.104	Gasterosteus_aculeatus
ENSTGUG00000006889	-	100	94.962	ENSGAGG00000018295	RC3H2	100	94.962	Gopherus_agassizii
ENSTGUG00000006889	-	100	90.544	ENSGGOG00000017062	RC3H2	95	98.896	Gorilla_gorilla
ENSTGUG00000006889	-	91	57.730	ENSHBUG00000003976	rc3h2	92	57.603	Haplochromis_burtoni
ENSTGUG00000006889	-	100	90.871	ENSHGLG00100018015	RC3H2	100	90.871	Heterocephalus_glaber_male
ENSTGUG00000006889	-	80	58.918	ENSHCOG00000003006	rc3h2	87	58.597	Hippocampus_comes
ENSTGUG00000006889	-	81	57.895	ENSIPUG00000021433	rc3h2	90	58.041	Ictalurus_punctatus
ENSTGUG00000006889	-	100	91.031	ENSSTOG00000010655	RC3H2	100	91.031	Ictidomys_tridecemlineatus
ENSTGUG00000006889	-	100	90.377	ENSJJAG00000022376	Rc3h2	100	90.377	Jaculus_jaculus
ENSTGUG00000006889	-	91	57.310	ENSKMAG00000010936	rc3h2	92	56.926	Kryptolebias_marmoratus
ENSTGUG00000006889	-	93	63.144	ENSLOCG00000002894	rc3h2	95	63.740	Lepisosteus_oculatus
ENSTGUG00000006889	-	100	90.863	ENSLAFG00000003521	RC3H2	100	90.863	Loxodonta_africana
ENSTGUG00000006889	-	94	99.093	ENSMFAG00000035621	RC3H2	95	98.896	Macaca_fascicularis
ENSTGUG00000006889	-	100	90.628	ENSMMUG00000021134	RC3H2	95	98.896	Macaca_mulatta
ENSTGUG00000006889	-	100	90.628	ENSMNEG00000031599	RC3H2	95	96.468	Macaca_nemestrina
ENSTGUG00000006889	-	96	90.035	ENSMLEG00000033809	RC3H2	95	98.896	Mandrillus_leucophaeus
ENSTGUG00000006889	-	91	57.819	ENSMZEG00005017019	rc3h2	92	57.692	Maylandia_zebra
ENSTGUG00000006889	-	100	98.659	ENSMGAG00000007984	RC3H2	100	98.659	Meleagris_gallopavo
ENSTGUG00000006889	-	84	85.904	ENSMAUG00000003117	Rc3h2	95	84.896	Mesocricetus_auratus
ENSTGUG00000006889	-	100	90.612	ENSMICG00000003227	RC3H2	95	98.675	Microcebus_murinus
ENSTGUG00000006889	-	100	89.271	ENSMOCG00000009592	Rc3h2	100	89.271	Microtus_ochrogaster
ENSTGUG00000006889	-	74	86.976	ENSMMOG00000021305	rc3h2	96	86.976	Mola_mola
ENSTGUG00000006889	-	94	91.889	ENSMODG00000019725	RC3H2	79	91.889	Monodelphis_domestica
ENSTGUG00000006889	-	100	88.265	MGP_CAROLIEiJ_G0023516	Rc3h2	95	98.896	Mus_caroli
ENSTGUG00000006889	-	100	90.109	ENSMUSG00000075376	Rc3h2	95	98.896	Mus_musculus
ENSTGUG00000006889	-	100	90.444	MGP_PahariEiJ_G0024969	Rc3h2	95	98.896	Mus_pahari
ENSTGUG00000006889	-	100	90.277	MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	Mus_spretus
ENSTGUG00000006889	-	100	91.031	ENSMPUG00000014141	RC3H2	100	90.947	Mustela_putorius_furo
ENSTGUG00000006889	-	100	90.696	ENSMLUG00000013992	RC3H2	100	90.696	Myotis_lucifugus
ENSTGUG00000006889	-	91	57.754	ENSNBRG00000009276	rc3h2	92	57.627	Neolamprologus_brichardi
ENSTGUG00000006889	-	100	89.372	ENSNLEG00000017204	RC3H2	95	98.896	Nomascus_leucogenys
ENSTGUG00000006889	-	60	99.605	ENSMEUG00000001299	-	64	99.605	Notamacropus_eugenii
ENSTGUG00000006889	-	82	85.750	ENSOPRG00000000135	RC3H2	93	85.750	Ochotona_princeps
ENSTGUG00000006889	-	91	59.836	ENSONIG00000003945	rc3h2	100	59.872	Oreochromis_niloticus
ENSTGUG00000006889	-	90	92.407	ENSOANG00000008194	RC3H2	100	92.407	Ornithorhynchus_anatinus
ENSTGUG00000006889	-	100	90.863	ENSOCUG00000008804	RC3H2	100	90.863	Oryctolagus_cuniculus
ENSTGUG00000006889	-	91	56.495	ENSORLG00000010018	rc3h2	92	56.417	Oryzias_latipes
ENSTGUG00000006889	-	91	56.317	ENSORLG00020013257	rc3h2	92	56.239	Oryzias_latipes_hni
ENSTGUG00000006889	-	91	56.533	ENSORLG00015001525	rc3h2	92	56.557	Oryzias_latipes_hsok
ENSTGUG00000006889	-	92	56.764	ENSOMEG00000023540	rc3h2	93	56.929	Oryzias_melastigma
ENSTGUG00000006889	-	100	90.377	ENSOGAG00000010678	RC3H2	100	90.377	Otolemur_garnettii
ENSTGUG00000006889	-	100	91.046	ENSOARG00000013965	RC3H2	100	91.046	Ovis_aries
ENSTGUG00000006889	-	100	90.460	ENSPPAG00000036013	RC3H2	95	98.675	Pan_paniscus
ENSTGUG00000006889	-	100	91.130	ENSPPRG00000008698	RC3H2	100	91.130	Panthera_pardus
ENSTGUG00000006889	-	100	91.130	ENSPTIG00000014257	RC3H2	100	91.130	Panthera_tigris_altaica
ENSTGUG00000006889	-	100	90.460	ENSPTRG00000021339	RC3H2	95	98.675	Pan_troglodytes
ENSTGUG00000006889	-	100	89.038	ENSPANG00000025840	RC3H2	95	94.481	Papio_anubis
ENSTGUG00000006889	-	93	61.759	ENSPKIG00000021910	rc3h2	90	61.400	Paramormyrops_kingsleyae
ENSTGUG00000006889	-	100	95.382	ENSPSIG00000005393	RC3H2	100	95.382	Pelodiscus_sinensis
ENSTGUG00000006889	-	80	78.107	ENSPMGG00000023963	rc3h2	94	86.682	Periophthalmus_magnuspinnatus
ENSTGUG00000006889	-	100	90.025	ENSPEMG00000023441	Rc3h2	100	90.025	Peromyscus_maniculatus_bairdii
ENSTGUG00000006889	-	94	99.546	ENSPCIG00000025559	RC3H2	100	91.625	Phascolarctos_cinereus
ENSTGUG00000006889	-	91	56.076	ENSPFOG00000019699	rc3h2	100	59.549	Poecilia_formosa
ENSTGUG00000006889	-	81	55.646	ENSPLAG00000005799	rc3h2	90	64.768	Poecilia_latipinna
ENSTGUG00000006889	-	92	55.654	ENSPMEG00000014187	rc3h2	93	55.922	Poecilia_mexicana
ENSTGUG00000006889	-	92	55.654	ENSPREG00000008979	rc3h2	92	55.744	Poecilia_reticulata
ENSTGUG00000006889	-	87	86.561	ENSPCAG00000010154	RC3H2	86	86.561	Procavia_capensis
ENSTGUG00000006889	-	91	57.155	ENSPNYG00000012063	rc3h2	92	57.029	Pundamilia_nyererei
ENSTGUG00000006889	-	82	60.041	ENSPNAG00000017502	rc3h2	88	59.714	Pygocentrus_nattereri
ENSTGUG00000006889	-	100	90.193	ENSRNOG00000009196	Rc3h2	100	90.193	Rattus_norvegicus
ENSTGUG00000006889	-	95	90.957	ENSRBIG00000032579	RC3H2	95	98.896	Rhinopithecus_bieti
ENSTGUG00000006889	-	100	90.780	ENSRROG00000043784	RC3H2	95	98.896	Rhinopithecus_roxellana
ENSTGUG00000006889	-	100	90.544	ENSSBOG00000029100	RC3H2	95	98.896	Saimiri_boliviensis_boliviensis
ENSTGUG00000006889	-	100	91.388	ENSSHAG00000007498	RC3H2	100	91.388	Sarcophilus_harrisii
ENSTGUG00000006889	-	91	57.282	ENSSMAG00000020048	rc3h2	93	57.080	Scophthalmus_maximus
ENSTGUG00000006889	-	92	57.743	ENSSDUG00000016022	rc3h2	93	57.655	Seriola_dumerili
ENSTGUG00000006889	-	92	57.655	ENSSLDG00000016070	rc3h2	93	57.406	Seriola_lalandi_dorsalis
ENSTGUG00000006889	-	100	89.958	ENSSARG00000012329	RC3H2	100	89.958	Sorex_araneus
ENSTGUG00000006889	-	100	92.379	ENSSPUG00000001457	RC3H2	100	92.379	Sphenodon_punctatus
ENSTGUG00000006889	-	92	57.666	ENSSPAG00000005233	rc3h2	93	57.642	Stegastes_partitus
ENSTGUG00000006889	-	100	90.871	ENSSSCG00000005575	RC3H2	93	98.675	Sus_scrofa
ENSTGUG00000006889	-	81	58.617	ENSTNIG00000004942	rc3h2	100	58.216	Tetraodon_nigroviridis
ENSTGUG00000006889	-	75	95.833	ENSTBEG00000009622	RC3H2	86	95.833	Tupaia_belangeri
ENSTGUG00000006889	-	94	92.676	ENSTTRG00000016954	RC3H2	94	92.676	Tursiops_truncatus
ENSTGUG00000006889	-	100	91.450	ENSUAMG00000015355	RC3H2	100	91.450	Ursus_americanus
ENSTGUG00000006889	-	100	91.450	ENSUMAG00000003161	RC3H2	95	98.896	Ursus_maritimus
ENSTGUG00000006889	-	100	90.711	ENSVPAG00000005994	RC3H2	100	90.711	Vicugna_pacos
ENSTGUG00000006889	-	100	91.282	ENSVVUG00000009519	RC3H2	100	91.282	Vulpes_vulpes
ENSTGUG00000006889	-	81	57.711	ENSXCOG00000005002	rc3h2	97	85.210	Xiphophorus_couchianus
ENSTGUG00000006889	-	91	56.706	ENSXMAG00000001724	rc3h2	91	56.396	Xiphophorus_maculatus