EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000007002 (Gene tree)
Gene ID: 100220989
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 1929 bases
Position: chr5:7313510-7315438
Accession: 100220989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007203	Clp1	PF06807.14	2.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007274	CLP1-201	1278	-	ENSTGUP00000007203	425 (aa)	XP_002194451	H0Z9F0

Gene Model

Click here to download ENSTGUG00000007002's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007002	CLP1	100	92.471	ENSG00000172409	CLP1	100	92.471	Homo_sapiens
ENSTGUG00000007002	CLP1	98	76.179	ENSAPOG00000008242	clp1	96	76.179	Acanthochromis_polyacanthus
ENSTGUG00000007002	CLP1	100	92.000	ENSAMEG00000014551	CLP1	98	92.000	Ailuropoda_melanoleuca
ENSTGUG00000007002	CLP1	98	75.943	ENSACIG00000006310	clp1	95	75.943	Amphilophus_citrinellus
ENSTGUG00000007002	CLP1	99	75.234	ENSAOCG00000010681	clp1	99	75.234	Amphiprion_ocellaris
ENSTGUG00000007002	CLP1	99	75.581	ENSAPEG00000012165	clp1	100	75.581	Amphiprion_percula
ENSTGUG00000007002	CLP1	99	75.231	ENSATEG00000012374	clp1	98	75.231	Anabas_testudineus
ENSTGUG00000007002	CLP1	100	94.118	ENSACAG00000007139	CLP1	100	94.118	Anolis_carolinensis
ENSTGUG00000007002	CLP1	100	92.471	ENSANAG00000034935	CLP1	100	92.471	Aotus_nancymaae
ENSTGUG00000007002	CLP1	99	74.769	ENSACLG00000013573	clp1	98	74.769	Astatotilapia_calliptera
ENSTGUG00000007002	CLP1	97	78.810	ENSAMXG00000014194	clp1	97	78.810	Astyanax_mexicanus
ENSTGUG00000007002	CLP1	100	92.000	ENSBTAG00000006493	CLP1	100	92.000	Bos_taurus
ENSTGUG00000007002	CLP1	98	47.867	WBGene00010304	clpf-1	98	47.867	Caenorhabditis_elegans
ENSTGUG00000007002	CLP1	100	92.471	ENSCJAG00000008748	CLP1	100	92.471	Callithrix_jacchus
ENSTGUG00000007002	CLP1	100	92.000	ENSCAFG00000007815	CLP1	100	92.000	Canis_familiaris
ENSTGUG00000007002	CLP1	100	92.000	ENSCAFG00020000903	CLP1	100	92.000	Canis_lupus_dingo
ENSTGUG00000007002	CLP1	100	91.765	ENSCHIG00000023497	CLP1	100	91.765	Capra_hircus
ENSTGUG00000007002	CLP1	100	92.471	ENSTSYG00000006824	CLP1	99	92.471	Carlito_syrichta
ENSTGUG00000007002	CLP1	100	92.000	ENSCAPG00000009703	CLP1	100	92.000	Cavia_aperea
ENSTGUG00000007002	CLP1	98	93.750	ENSCPOG00000012554	CLP1	99	93.750	Cavia_porcellus
ENSTGUG00000007002	CLP1	100	92.235	ENSCCAG00000031957	CLP1	100	92.235	Cebus_capucinus
ENSTGUG00000007002	CLP1	100	92.471	ENSCATG00000044628	CLP1	100	92.471	Cercocebus_atys
ENSTGUG00000007002	CLP1	100	92.235	ENSCLAG00000004094	CLP1	100	92.235	Chinchilla_lanigera
ENSTGUG00000007002	CLP1	100	92.471	ENSCSAG00000005994	CLP1	100	92.471	Chlorocebus_sabaeus
ENSTGUG00000007002	CLP1	100	94.824	ENSCPBG00000016843	CLP1	100	94.824	Chrysemys_picta_bellii
ENSTGUG00000007002	CLP1	97	63.504	ENSCING00000003779	-	96	63.504	Ciona_intestinalis
ENSTGUG00000007002	CLP1	99	61.702	ENSCSAVG00000003437	-	99	61.702	Ciona_savignyi
ENSTGUG00000007002	CLP1	100	92.471	ENSCANG00000034335	CLP1	100	92.471	Colobus_angolensis_palliatus
ENSTGUG00000007002	CLP1	100	92.235	ENSCGRG00001002227	CLP1	100	92.235	Cricetulus_griseus_chok1gshd
ENSTGUG00000007002	CLP1	100	92.235	ENSCGRG00000004328	CLP1	100	92.235	Cricetulus_griseus_crigri
ENSTGUG00000007002	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSTGUG00000007002	CLP1	99	75.694	ENSCVAG00000020101	clp1	98	75.694	Cyprinodon_variegatus
ENSTGUG00000007002	CLP1	97	79.187	ENSDARG00000063663	clp1	96	77.934	Danio_rerio
ENSTGUG00000007002	CLP1	99	91.981	ENSDNOG00000042415	CLP1	90	91.981	Dasypus_novemcinctus
ENSTGUG00000007002	CLP1	100	92.000	ENSDORG00000014685	Clp1	100	92.000	Dipodomys_ordii
ENSTGUG00000007002	CLP1	99	54.930	FBgn0033842	cbc	99	54.930	Drosophila_melanogaster
ENSTGUG00000007002	CLP1	100	92.235	ENSETEG00000003009	CLP1	100	92.235	Echinops_telfairi
ENSTGUG00000007002	CLP1	98	72.662	ENSEBUG00000011648	clp1	98	72.662	Eptatretus_burgeri
ENSTGUG00000007002	CLP1	100	92.471	ENSEASG00005002093	CLP1	100	92.471	Equus_asinus_asinus
ENSTGUG00000007002	CLP1	100	92.471	ENSECAG00000011597	CLP1	100	92.471	Equus_caballus
ENSTGUG00000007002	CLP1	100	91.765	ENSEEUG00000012771	CLP1	100	91.765	Erinaceus_europaeus
ENSTGUG00000007002	CLP1	97	79.048	ENSELUG00000024048	clp1	95	79.048	Esox_lucius
ENSTGUG00000007002	CLP1	100	92.000	ENSFCAG00000006633	CLP1	100	92.000	Felis_catus
ENSTGUG00000007002	CLP1	100	99.529	ENSFALG00000011145	CLP1	100	99.529	Ficedula_albicollis
ENSTGUG00000007002	CLP1	100	92.235	ENSFDAG00000000234	CLP1	100	92.235	Fukomys_damarensis
ENSTGUG00000007002	CLP1	99	75.000	ENSFHEG00000014760	CLP1	98	75.000	Fundulus_heteroclitus
ENSTGUG00000007002	CLP1	97	79.376	ENSGMOG00000019340	clp1	95	79.376	Gadus_morhua
ENSTGUG00000007002	CLP1	100	97.647	ENSGALG00000007370	CLP1	100	97.647	Gallus_gallus
ENSTGUG00000007002	CLP1	99	75.463	ENSGAFG00000003020	clp1	99	75.463	Gambusia_affinis
ENSTGUG00000007002	CLP1	100	75.057	ENSGACG00000017832	clp1	100	75.057	Gasterosteus_aculeatus
ENSTGUG00000007002	CLP1	100	94.824	ENSGAGG00000013279	CLP1	100	94.824	Gopherus_agassizii
ENSTGUG00000007002	CLP1	100	92.471	ENSGGOG00000023006	CLP1	100	92.471	Gorilla_gorilla
ENSTGUG00000007002	CLP1	99	74.537	ENSHBUG00000010436	clp1	98	74.537	Haplochromis_burtoni
ENSTGUG00000007002	CLP1	100	92.235	ENSHGLG00000009914	CLP1	100	92.235	Heterocephalus_glaber_female
ENSTGUG00000007002	CLP1	100	92.235	ENSHGLG00100006105	CLP1	100	92.235	Heterocephalus_glaber_male
ENSTGUG00000007002	CLP1	99	76.620	ENSHCOG00000010072	clp1	98	76.620	Hippocampus_comes
ENSTGUG00000007002	CLP1	97	79.286	ENSIPUG00000016238	clp1	96	77.546	Ictalurus_punctatus
ENSTGUG00000007002	CLP1	100	92.235	ENSSTOG00000029257	CLP1	100	92.235	Ictidomys_tridecemlineatus
ENSTGUG00000007002	CLP1	100	91.529	ENSJJAG00000023691	Clp1	100	91.529	Jaculus_jaculus
ENSTGUG00000007002	CLP1	99	75.231	ENSKMAG00000011990	clp1	98	75.231	Kryptolebias_marmoratus
ENSTGUG00000007002	CLP1	99	75.231	ENSLBEG00000010201	clp1	98	75.231	Labrus_bergylta
ENSTGUG00000007002	CLP1	100	86.588	ENSLACG00000003160	CLP1	100	86.588	Latimeria_chalumnae
ENSTGUG00000007002	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.019	Lepisosteus_oculatus
ENSTGUG00000007002	CLP1	100	92.000	ENSLAFG00000014907	CLP1	100	92.000	Loxodonta_africana
ENSTGUG00000007002	CLP1	100	92.471	ENSMFAG00000046074	CLP1	100	92.471	Macaca_fascicularis
ENSTGUG00000007002	CLP1	100	92.471	ENSMMUG00000038007	CLP1	99	92.471	Macaca_mulatta
ENSTGUG00000007002	CLP1	100	92.471	ENSMNEG00000000259	CLP1	100	92.471	Macaca_nemestrina
ENSTGUG00000007002	CLP1	100	92.471	ENSMLEG00000043556	CLP1	100	92.471	Mandrillus_leucophaeus
ENSTGUG00000007002	CLP1	100	75.289	ENSMAMG00000002149	clp1	98	75.289	Mastacembelus_armatus
ENSTGUG00000007002	CLP1	99	74.769	ENSMZEG00005002850	clp1	98	74.769	Maylandia_zebra
ENSTGUG00000007002	CLP1	100	97.647	ENSMGAG00000009643	CLP1	100	97.647	Meleagris_gallopavo
ENSTGUG00000007002	CLP1	100	92.471	ENSMAUG00000016261	Clp1	100	92.471	Mesocricetus_auratus
ENSTGUG00000007002	CLP1	100	92.000	ENSMICG00000004895	CLP1	100	92.000	Microcebus_murinus
ENSTGUG00000007002	CLP1	100	92.000	ENSMOCG00000005498	Clp1	100	92.000	Microtus_ochrogaster
ENSTGUG00000007002	CLP1	99	76.389	ENSMMOG00000003229	clp1	98	76.389	Mola_mola
ENSTGUG00000007002	CLP1	100	92.706	ENSMODG00000024148	-	100	92.706	Monodelphis_domestica
ENSTGUG00000007002	CLP1	100	92.706	ENSMODG00000020107	-	100	92.706	Monodelphis_domestica
ENSTGUG00000007002	CLP1	100	74.827	ENSMALG00000014239	clp1	98	74.827	Monopterus_albus
ENSTGUG00000007002	CLP1	100	91.529	MGP_CAROLIEiJ_G0023726	Clp1	100	91.529	Mus_caroli
ENSTGUG00000007002	CLP1	100	91.529	ENSMUSG00000027079	Clp1	100	91.529	Mus_musculus
ENSTGUG00000007002	CLP1	100	91.294	MGP_PahariEiJ_G0025177	Clp1	100	91.294	Mus_pahari
ENSTGUG00000007002	CLP1	100	91.529	MGP_SPRETEiJ_G0024646	Clp1	100	91.529	Mus_spretus
ENSTGUG00000007002	CLP1	100	92.000	ENSMPUG00000000268	CLP1	100	92.000	Mustela_putorius_furo
ENSTGUG00000007002	CLP1	100	92.235	ENSMLUG00000007904	CLP1	100	92.235	Myotis_lucifugus
ENSTGUG00000007002	CLP1	100	91.765	ENSNGAG00000006165	Clp1	100	91.765	Nannospalax_galili
ENSTGUG00000007002	CLP1	99	74.769	ENSNBRG00000005225	clp1	98	74.769	Neolamprologus_brichardi
ENSTGUG00000007002	CLP1	82	87.600	ENSNLEG00000012809	-	100	87.600	Nomascus_leucogenys
ENSTGUG00000007002	CLP1	100	92.235	ENSMEUG00000010949	CLP1	99	92.235	Notamacropus_eugenii
ENSTGUG00000007002	CLP1	70	94.631	ENSOPRG00000007329	CLP1	100	94.631	Ochotona_princeps
ENSTGUG00000007002	CLP1	100	92.235	ENSODEG00000011410	CLP1	100	92.235	Octodon_degus
ENSTGUG00000007002	CLP1	99	74.537	ENSONIG00000005089	clp1	98	74.537	Oreochromis_niloticus
ENSTGUG00000007002	CLP1	100	92.235	ENSOCUG00000007045	CLP1	100	92.235	Oryctolagus_cuniculus
ENSTGUG00000007002	CLP1	99	74.537	ENSORLG00000003647	clp1	98	74.537	Oryzias_latipes
ENSTGUG00000007002	CLP1	99	74.306	ENSORLG00020016676	clp1	98	74.306	Oryzias_latipes_hni
ENSTGUG00000007002	CLP1	99	74.537	ENSORLG00015019484	clp1	98	74.537	Oryzias_latipes_hsok
ENSTGUG00000007002	CLP1	99	75.174	ENSOMEG00000021303	clp1	98	75.174	Oryzias_melastigma
ENSTGUG00000007002	CLP1	100	92.000	ENSOGAG00000004508	CLP1	100	92.000	Otolemur_garnettii
ENSTGUG00000007002	CLP1	100	90.588	ENSOARG00000010145	CLP1	98	90.588	Ovis_aries
ENSTGUG00000007002	CLP1	100	92.471	ENSPPAG00000041519	CLP1	100	92.471	Pan_paniscus
ENSTGUG00000007002	CLP1	100	92.000	ENSPPRG00000006135	CLP1	100	92.000	Panthera_pardus
ENSTGUG00000007002	CLP1	100	92.000	ENSPTIG00000015866	CLP1	100	92.000	Panthera_tigris_altaica
ENSTGUG00000007002	CLP1	100	92.471	ENSPTRG00000047318	CLP1	100	92.471	Pan_troglodytes
ENSTGUG00000007002	CLP1	100	92.471	ENSPANG00000017078	CLP1	97	92.471	Papio_anubis
ENSTGUG00000007002	CLP1	97	80.145	ENSPKIG00000007697	clp1	94	80.145	Paramormyrops_kingsleyae
ENSTGUG00000007002	CLP1	95	92.537	ENSPSIG00000005468	CLP1	100	92.537	Pelodiscus_sinensis
ENSTGUG00000007002	CLP1	97	77.857	ENSPMGG00000012171	clp1	95	77.857	Periophthalmus_magnuspinnatus
ENSTGUG00000007002	CLP1	100	92.000	ENSPEMG00000011213	-	100	92.000	Peromyscus_maniculatus_bairdii
ENSTGUG00000007002	CLP1	99	75.355	ENSPMAG00000006707	clp1	99	75.355	Petromyzon_marinus
ENSTGUG00000007002	CLP1	100	92.706	ENSPCIG00000011899	CLP1	99	92.706	Phascolarctos_cinereus
ENSTGUG00000007002	CLP1	99	75.231	ENSPFOG00000008169	clp1	98	75.231	Poecilia_formosa
ENSTGUG00000007002	CLP1	99	75.406	ENSPLAG00000022388	clp1	99	75.406	Poecilia_latipinna
ENSTGUG00000007002	CLP1	99	75.406	ENSPMEG00000021088	clp1	99	75.406	Poecilia_mexicana
ENSTGUG00000007002	CLP1	99	75.231	ENSPREG00000017802	clp1	98	75.231	Poecilia_reticulata
ENSTGUG00000007002	CLP1	53	94.643	ENSPPYG00000003266	-	100	94.643	Pongo_abelii
ENSTGUG00000007002	CLP1	100	92.000	ENSPCOG00000000360	CLP1	98	92.000	Propithecus_coquereli
ENSTGUG00000007002	CLP1	100	92.000	ENSPVAG00000016270	CLP1	100	92.000	Pteropus_vampyrus
ENSTGUG00000007002	CLP1	99	74.537	ENSPNYG00000017274	clp1	97	74.537	Pundamilia_nyererei
ENSTGUG00000007002	CLP1	97	79.762	ENSPNAG00000026460	clp1	94	79.762	Pygocentrus_nattereri
ENSTGUG00000007002	CLP1	100	91.529	ENSRNOG00000007416	Clp1	100	91.529	Rattus_norvegicus
ENSTGUG00000007002	CLP1	100	92.471	ENSRBIG00000018191	CLP1	100	92.471	Rhinopithecus_bieti
ENSTGUG00000007002	CLP1	100	92.471	ENSRROG00000039265	CLP1	100	92.471	Rhinopithecus_roxellana
ENSTGUG00000007002	CLP1	100	92.471	ENSSBOG00000032517	-	100	92.471	Saimiri_boliviensis_boliviensis
ENSTGUG00000007002	CLP1	96	76.847	ENSSBOG00000010558	-	93	76.847	Saimiri_boliviensis_boliviensis
ENSTGUG00000007002	CLP1	100	92.471	ENSSHAG00000015695	CLP1	100	92.471	Sarcophilus_harrisii
ENSTGUG00000007002	CLP1	97	79.059	ENSSFOG00015000628	clp1	99	77.803	Scleropages_formosus
ENSTGUG00000007002	CLP1	99	74.769	ENSSMAG00000019423	clp1	97	74.769	Scophthalmus_maximus
ENSTGUG00000007002	CLP1	98	76.887	ENSSDUG00000014495	clp1	96	76.887	Seriola_dumerili
ENSTGUG00000007002	CLP1	98	76.651	ENSSLDG00000000937	clp1	96	76.651	Seriola_lalandi_dorsalis
ENSTGUG00000007002	CLP1	52	94.170	ENSSARG00000002459	CLP1	100	94.170	Sorex_araneus
ENSTGUG00000007002	CLP1	100	94.824	ENSSPUG00000016811	CLP1	100	94.824	Sphenodon_punctatus
ENSTGUG00000007002	CLP1	98	75.708	ENSSPAG00000016052	clp1	96	75.708	Stegastes_partitus
ENSTGUG00000007002	CLP1	100	92.000	ENSSSCG00000031442	CLP1	100	92.000	Sus_scrofa
ENSTGUG00000007002	CLP1	99	76.168	ENSTRUG00000012602	clp1	98	76.168	Takifugu_rubripes
ENSTGUG00000007002	CLP1	99	75.701	ENSTNIG00000013125	clp1	98	75.701	Tetraodon_nigroviridis
ENSTGUG00000007002	CLP1	100	91.294	ENSTBEG00000009975	CLP1	100	91.294	Tupaia_belangeri
ENSTGUG00000007002	CLP1	100	91.529	ENSTTRG00000002096	CLP1	100	91.529	Tursiops_truncatus
ENSTGUG00000007002	CLP1	100	92.000	ENSUAMG00000011388	CLP1	100	92.000	Ursus_americanus
ENSTGUG00000007002	CLP1	100	92.000	ENSUMAG00000018317	CLP1	100	92.000	Ursus_maritimus
ENSTGUG00000007002	CLP1	100	92.000	ENSVVUG00000017138	CLP1	97	92.000	Vulpes_vulpes
ENSTGUG00000007002	CLP1	97	78.502	ENSXETG00000007088	clp1	95	78.986	Xenopus_tropicalis
ENSTGUG00000007002	CLP1	99	75.231	ENSXCOG00000002287	clp1	98	75.231	Xiphophorus_couchianus
ENSTGUG00000007002	CLP1	99	75.231	ENSXMAG00000009783	clp1	98	75.231	Xiphophorus_maculatus