EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000007476 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 66998 bases
Position: chr11:8871500-8938497
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007722	ResIII	PF04851.15	2.5e-06	1	1
ENSTGUP00000007722	BRK	PF07533.16	1.9e-33	1	2
ENSTGUP00000007722	BRK	PF07533.16	1.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007803	CHD9-201	7818	-	ENSTGUP00000007722	2606 (aa)	-	H0ZAW5

Gene Model

Click here to download ENSTGUG00000007476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000007476	CHD9	83	71.528	ENSTGUG00000011196	CHD7	87	54.709
ENSTGUG00000007476	CHD9	71	64.944	ENSTGUG00000003179	CHD6	74	63.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007476	CHD9	100	85.889	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSTGUG00000007476	CHD9	86	73.377	ENSAPOG00000023034	chd9	87	72.608	Acanthochromis_polyacanthus
ENSTGUG00000007476	CHD9	100	85.703	ENSAMEG00000016232	CHD9	90	85.512	Ailuropoda_melanoleuca
ENSTGUG00000007476	CHD9	67	74.725	ENSACIG00000004097	chd9	73	62.511	Amphilophus_citrinellus
ENSTGUG00000007476	CHD9	86	73.893	ENSAOCG00000005487	chd9	87	73.043	Amphiprion_ocellaris
ENSTGUG00000007476	CHD9	95	73.823	ENSAPEG00000009859	chd9	87	72.616	Amphiprion_percula
ENSTGUG00000007476	CHD9	62	77.974	ENSATEG00000002748	chd9	89	64.264	Anabas_testudineus
ENSTGUG00000007476	CHD9	100	94.438	ENSAPLG00000002826	CHD9	74	96.000	Anas_platyrhynchos
ENSTGUG00000007476	CHD9	100	84.621	ENSACAG00000016150	CHD9	89	84.889	Anolis_carolinensis
ENSTGUG00000007476	CHD9	100	85.163	ENSANAG00000015630	CHD9	90	85.124	Aotus_nancymaae
ENSTGUG00000007476	CHD9	99	64.388	ENSAMXG00000005652	chd9	88	72.265	Astyanax_mexicanus
ENSTGUG00000007476	CHD9	100	85.966	ENSBTAG00000002287	CHD9	90	85.736	Bos_taurus
ENSTGUG00000007476	CHD9	100	84.818	ENSCJAG00000001573	CHD9	90	84.436	Callithrix_jacchus
ENSTGUG00000007476	CHD9	100	85.851	ENSCAFG00000009699	CHD9	90	85.660	Canis_familiaris
ENSTGUG00000007476	CHD9	100	85.851	ENSCAFG00020002879	CHD9	90	85.660	Canis_lupus_dingo
ENSTGUG00000007476	CHD9	100	85.463	ENSTSYG00000007693	CHD9	90	85.272	Carlito_syrichta
ENSTGUG00000007476	CHD9	79	69.085	ENSCAPG00000011604	CHD9	70	71.311	Cavia_aperea
ENSTGUG00000007476	CHD9	100	81.491	ENSCPOG00000036544	CHD9	90	81.453	Cavia_porcellus
ENSTGUG00000007476	CHD9	100	84.512	ENSCCAG00000036178	CHD9	90	84.474	Cebus_capucinus
ENSTGUG00000007476	CHD9	100	85.201	ENSCATG00000036753	CHD9	90	85.010	Cercocebus_atys
ENSTGUG00000007476	CHD9	100	84.971	ENSCLAG00000007137	CHD9	99	91.389	Chinchilla_lanigera
ENSTGUG00000007476	CHD9	100	85.621	ENSCSAG00000005311	CHD9	90	85.660	Chlorocebus_sabaeus
ENSTGUG00000007476	CHD9	71	94.231	ENSCHOG00000003935	CHD9	66	94.231	Choloepus_hoffmanni
ENSTGUG00000007476	CHD9	100	92.449	ENSCPBG00000012459	CHD9	99	90.292	Chrysemys_picta_bellii
ENSTGUG00000007476	CHD9	100	85.774	ENSCANG00000030349	CHD9	90	85.583	Colobus_angolensis_palliatus
ENSTGUG00000007476	CHD9	100	83.136	ENSCGRG00001016150	Chd9	90	83.059	Cricetulus_griseus_chok1gshd
ENSTGUG00000007476	CHD9	100	83.136	ENSCGRG00000012850	Chd9	99	90.471	Cricetulus_griseus_crigri
ENSTGUG00000007476	CHD9	81	72.325	ENSCSEG00000009209	chd9	87	62.001	Cynoglossus_semilaevis
ENSTGUG00000007476	CHD9	62	74.727	ENSDARG00000074498	chd9	88	70.556	Danio_rerio
ENSTGUG00000007476	CHD9	79	89.588	ENSDNOG00000006045	CHD9	88	88.620	Dasypus_novemcinctus
ENSTGUG00000007476	CHD9	66	87.645	ENSDORG00000008523	-	85	87.529	Dipodomys_ordii
ENSTGUG00000007476	CHD9	91	98.425	ENSETEG00000009565	CHD9	82	98.425	Echinops_telfairi
ENSTGUG00000007476	CHD9	100	85.545	ENSEASG00005014832	CHD9	98	83.333	Equus_asinus_asinus
ENSTGUG00000007476	CHD9	100	85.583	ENSECAG00000011505	CHD9	90	85.354	Equus_caballus
ENSTGUG00000007476	CHD9	86	93.370	ENSEEUG00000014515	CHD9	81	93.370	Erinaceus_europaeus
ENSTGUG00000007476	CHD9	74	73.122	ENSELUG00000006031	chd9	86	71.345	Esox_lucius
ENSTGUG00000007476	CHD9	100	85.338	ENSFCAG00000022534	CHD9	90	85.567	Felis_catus
ENSTGUG00000007476	CHD9	82	98.592	ENSFALG00000013276	CHD9	88	98.592	Ficedula_albicollis
ENSTGUG00000007476	CHD9	100	84.933	ENSFDAG00000021037	CHD9	90	84.895	Fukomys_damarensis
ENSTGUG00000007476	CHD9	87	71.985	ENSFHEG00000006068	chd9	85	73.443	Fundulus_heteroclitus
ENSTGUG00000007476	CHD9	71	77.642	ENSGMOG00000006040	chd9	78	77.846	Gadus_morhua
ENSTGUG00000007476	CHD9	100	95.397	ENSGALG00000039178	CHD9	92	95.397	Gallus_gallus
ENSTGUG00000007476	CHD9	86	72.537	ENSGAFG00000010014	chd9	86	71.774	Gambusia_affinis
ENSTGUG00000007476	CHD9	80	70.849	ENSGACG00000016694	chd9	84	76.017	Gasterosteus_aculeatus
ENSTGUG00000007476	CHD9	100	85.703	ENSGGOG00000014816	CHD9	90	85.474	Gorilla_gorilla
ENSTGUG00000007476	CHD9	80	73.451	ENSHBUG00000023322	chd9	87	72.376	Haplochromis_burtoni
ENSTGUG00000007476	CHD9	100	84.933	ENSHGLG00000014938	CHD9	99	91.619	Heterocephalus_glaber_female
ENSTGUG00000007476	CHD9	99	61.393	ENSHCOG00000000937	chd9	88	70.497	Hippocampus_comes
ENSTGUG00000007476	CHD9	80	73.664	ENSIPUG00000016448	chd9	87	73.039	Ictalurus_punctatus
ENSTGUG00000007476	CHD9	100	84.627	ENSSTOG00000022273	CHD9	99	91.619	Ictidomys_tridecemlineatus
ENSTGUG00000007476	CHD9	66	88.341	ENSJJAG00000015741	-	85	87.993	Jaculus_jaculus
ENSTGUG00000007476	CHD9	86	72.845	ENSKMAG00000016784	chd9	86	72.536	Kryptolebias_marmoratus
ENSTGUG00000007476	CHD9	90	66.912	ENSLBEG00000012077	chd9	86	72.197	Labrus_bergylta
ENSTGUG00000007476	CHD9	100	74.161	ENSLACG00000005557	CHD9	73	74.182	Latimeria_chalumnae
ENSTGUG00000007476	CHD9	87	75.517	ENSLOCG00000007225	chd9	87	76.411	Lepisosteus_oculatus
ENSTGUG00000007476	CHD9	100	85.627	ENSLAFG00000015374	CHD9	90	84.862	Loxodonta_africana
ENSTGUG00000007476	CHD9	100	85.813	ENSMFAG00000041354	CHD9	86	89.854	Macaca_fascicularis
ENSTGUG00000007476	CHD9	100	85.813	ENSMMUG00000016310	CHD9	90	85.621	Macaca_mulatta
ENSTGUG00000007476	CHD9	100	85.966	ENSMNEG00000031494	CHD9	100	85.471	Macaca_nemestrina
ENSTGUG00000007476	CHD9	100	85.813	ENSMLEG00000043219	CHD9	90	85.621	Mandrillus_leucophaeus
ENSTGUG00000007476	CHD9	80	73.439	ENSMAMG00000003909	chd9	88	63.209	Mastacembelus_armatus
ENSTGUG00000007476	CHD9	86	73.804	ENSMZEG00005006581	chd9	86	72.768	Maylandia_zebra
ENSTGUG00000007476	CHD9	95	88.457	ENSMGAG00000004642	CHD9	72	89.502	Meleagris_gallopavo
ENSTGUG00000007476	CHD9	100	85.315	ENSMICG00000016679	CHD9	90	84.971	Microcebus_murinus
ENSTGUG00000007476	CHD9	67	76.133	ENSMMOG00000016406	chd9	74	64.060	Mola_mola
ENSTGUG00000007476	CHD9	70	80.960	ENSMODG00000013142	-	85	92.603	Monodelphis_domestica
ENSTGUG00000007476	CHD9	80	73.534	ENSMALG00000013306	chd9	73	63.487	Monopterus_albus
ENSTGUG00000007476	CHD9	100	82.645	MGP_CAROLIEiJ_G0031364	Chd9	90	82.187	Mus_caroli
ENSTGUG00000007476	CHD9	100	82.034	ENSMUSG00000056608	Chd9	99	89.897	Mus_musculus
ENSTGUG00000007476	CHD9	100	80.810	MGP_PahariEiJ_G0022964	Chd9	90	80.352	Mus_pahari
ENSTGUG00000007476	CHD9	100	82.263	MGP_SPRETEiJ_G0032483	Chd9	90	81.804	Mus_spretus
ENSTGUG00000007476	CHD9	100	85.927	ENSMPUG00000003285	CHD9	90	85.736	Mustela_putorius_furo
ENSTGUG00000007476	CHD9	100	84.742	ENSMLUG00000004456	CHD9	90	84.665	Myotis_lucifugus
ENSTGUG00000007476	CHD9	86	73.467	ENSNBRG00000009423	chd9	86	72.393	Neolamprologus_brichardi
ENSTGUG00000007476	CHD9	100	85.927	ENSNLEG00000001026	CHD9	100	85.583	Nomascus_leucogenys
ENSTGUG00000007476	CHD9	82	100.000	ENSMEUG00000008222	-	84	100.000	Notamacropus_eugenii
ENSTGUG00000007476	CHD9	82	97.744	ENSOPRG00000011168	CHD9	76	95.442	Ochotona_princeps
ENSTGUG00000007476	CHD9	100	84.748	ENSODEG00000004466	CHD9	90	84.327	Octodon_degus
ENSTGUG00000007476	CHD9	80	74.138	ENSONIG00000002816	chd9	94	68.170	Oreochromis_niloticus
ENSTGUG00000007476	CHD9	100	86.611	ENSOANG00000013401	CHD9	90	86.611	Ornithorhynchus_anatinus
ENSTGUG00000007476	CHD9	82	89.587	ENSOCUG00000001016	CHD9	87	89.493	Oryctolagus_cuniculus
ENSTGUG00000007476	CHD9	80	72.076	ENSORLG00000013810	chd9	77	67.977	Oryzias_latipes
ENSTGUG00000007476	CHD9	95	72.032	ENSORLG00020020665	chd9	90	63.101	Oryzias_latipes_hni
ENSTGUG00000007476	CHD9	87	72.639	ENSORLG00015019126	chd9	99	62.584	Oryzias_latipes_hsok
ENSTGUG00000007476	CHD9	100	84.983	ENSOGAG00000002110	CHD9	90	84.589	Otolemur_garnettii
ENSTGUG00000007476	CHD9	100	85.867	ENSOARG00000017664	CHD9	90	85.638	Ovis_aries
ENSTGUG00000007476	CHD9	81	89.030	ENSPPAG00000039388	-	88	88.936	Pan_paniscus
ENSTGUG00000007476	CHD9	100	85.338	ENSPPRG00000004801	CHD9	90	85.567	Panthera_pardus
ENSTGUG00000007476	CHD9	100	84.154	ENSPTIG00000021854	CHD9	90	84.383	Panthera_tigris_altaica
ENSTGUG00000007476	CHD9	100	85.851	ENSPTRG00000008113	CHD9	90	85.621	Pan_troglodytes
ENSTGUG00000007476	CHD9	100	85.813	ENSPANG00000019307	CHD9	88	89.822	Papio_anubis
ENSTGUG00000007476	CHD9	100	64.328	ENSPKIG00000021876	chd9	69	77.243	Paramormyrops_kingsleyae
ENSTGUG00000007476	CHD9	100	60.650	ENSPKIG00000025401	-	72	62.140	Paramormyrops_kingsleyae
ENSTGUG00000007476	CHD9	71	90.417	ENSPSIG00000008099	CHD9	99	90.417	Pelodiscus_sinensis
ENSTGUG00000007476	CHD9	66	57.094	ENSPMAG00000006035	-	72	67.849	Petromyzon_marinus
ENSTGUG00000007476	CHD9	93	84.938	ENSPCIG00000017215	CHD9	97	90.502	Phascolarctos_cinereus
ENSTGUG00000007476	CHD9	86	72.545	ENSPFOG00000015839	chd9	80	69.726	Poecilia_formosa
ENSTGUG00000007476	CHD9	80	73.773	ENSPLAG00000011118	chd9	86	72.840	Poecilia_latipinna
ENSTGUG00000007476	CHD9	80	72.911	ENSPMEG00000015106	chd9	75	70.088	Poecilia_mexicana
ENSTGUG00000007476	CHD9	86	73.509	ENSPREG00000006473	chd9	86	71.715	Poecilia_reticulata
ENSTGUG00000007476	CHD9	100	85.851	ENSPPYG00000007348	CHD9	90	85.660	Pongo_abelii
ENSTGUG00000007476	CHD9	86	91.842	ENSPCAG00000007564	CHD9	86	91.842	Procavia_capensis
ENSTGUG00000007476	CHD9	100	84.245	ENSPCOG00000028433	CHD9	90	83.939	Propithecus_coquereli
ENSTGUG00000007476	CHD9	97	84.197	ENSPVAG00000015617	CHD9	90	79.426	Pteropus_vampyrus
ENSTGUG00000007476	CHD9	95	72.833	ENSPNYG00000010947	chd9	86	72.723	Pundamilia_nyererei
ENSTGUG00000007476	CHD9	92	68.834	ENSPNAG00000024141	chd9	88	72.856	Pygocentrus_nattereri
ENSTGUG00000007476	CHD9	100	79.702	ENSRNOG00000049302	Chd9	100	81.127	Rattus_norvegicus
ENSTGUG00000007476	CHD9	82	89.944	ENSRBIG00000035553	CHD9	88	89.709	Rhinopithecus_bieti
ENSTGUG00000007476	CHD9	81	90.123	ENSRROG00000033278	CHD9	88	89.886	Rhinopithecus_roxellana
ENSTGUG00000007476	CHD9	100	85.315	ENSSBOG00000030240	CHD9	90	84.933	Saimiri_boliviensis_boliviensis
ENSTGUG00000007476	CHD9	100	86.358	ENSSHAG00000002719	CHD9	90	86.282	Sarcophilus_harrisii
ENSTGUG00000007476	CHD9	100	64.795	ENSSFOG00015020209	chd9	87	73.469	Scleropages_formosus
ENSTGUG00000007476	CHD9	86	69.709	ENSSFOG00015001327	chd9	67	75.915	Scleropages_formosus
ENSTGUG00000007476	CHD9	86	72.626	ENSSMAG00000008953	chd9	99	62.833	Scophthalmus_maximus
ENSTGUG00000007476	CHD9	86	73.660	ENSSDUG00000006139	chd9	86	72.368	Seriola_dumerili
ENSTGUG00000007476	CHD9	86	74.197	ENSSLDG00000017818	chd9	86	72.892	Seriola_lalandi_dorsalis
ENSTGUG00000007476	CHD9	78	91.959	ENSSARG00000010632	CHD9	71	91.959	Sorex_araneus
ENSTGUG00000007476	CHD9	86	73.694	ENSSPAG00000021649	chd9	87	72.401	Stegastes_partitus
ENSTGUG00000007476	CHD9	67	76.061	ENSTRUG00000009125	chd9	84	69.320	Takifugu_rubripes
ENSTGUG00000007476	CHD9	61	83.495	ENSTNIG00000003825	chd9	84	83.495	Tetraodon_nigroviridis
ENSTGUG00000007476	CHD9	71	96.667	ENSTBEG00000016052	-	79	96.667	Tupaia_belangeri
ENSTGUG00000007476	CHD9	100	85.048	ENSTTRG00000012674	CHD9	90	84.665	Tursiops_truncatus
ENSTGUG00000007476	CHD9	60	87.571	ENSUAMG00000022706	CHD9	84	87.254	Ursus_americanus
ENSTGUG00000007476	CHD9	100	83.651	ENSUMAG00000004043	CHD9	99	85.077	Ursus_maritimus
ENSTGUG00000007476	CHD9	97	88.494	ENSVPAG00000001374	CHD9	87	88.099	Vicugna_pacos
ENSTGUG00000007476	CHD9	100	85.774	ENSVVUG00000019435	CHD9	90	85.583	Vulpes_vulpes
ENSTGUG00000007476	CHD9	100	75.686	ENSXETG00000000349	chd9	96	78.065	Xenopus_tropicalis
ENSTGUG00000007476	CHD9	80	73.534	ENSXCOG00000012997	chd9	86	72.719	Xiphophorus_couchianus
ENSTGUG00000007476	CHD9	86	73.120	ENSXMAG00000016192	chd9	86	73.488	Xiphophorus_maculatus