EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000007535 (Gene tree)
Gene ID: 100225776
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 33742 bases
Position: chr3:29230498-29264239
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007805	XRN_N	PF03159.18	8e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007890	XRN2-201	3367	-	ENSTGUP00000007805	950 (aa)	-	H0ZB47

Gene Model

Click here to download ENSTGUG00000007535's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007535	XRN2	100	81.648	ENSG00000088930	XRN2	100	81.211	Homo_sapiens
ENSTGUG00000007535	XRN2	97	70.414	ENSAPOG00000009818	xrn2	96	70.719	Acanthochromis_polyacanthus
ENSTGUG00000007535	XRN2	100	82.150	ENSAMEG00000012581	XRN2	100	81.733	Ailuropoda_melanoleuca
ENSTGUG00000007535	XRN2	90	70.080	ENSACIG00000015047	xrn2	95	74.280	Amphilophus_citrinellus
ENSTGUG00000007535	XRN2	97	70.758	ENSAOCG00000023632	xrn2	96	70.719	Amphiprion_ocellaris
ENSTGUG00000007535	XRN2	97	70.488	ENSAPEG00000014871	xrn2	96	70.613	Amphiprion_percula
ENSTGUG00000007535	XRN2	89	74.737	ENSATEG00000001273	xrn2	98	70.285	Anabas_testudineus
ENSTGUG00000007535	XRN2	97	93.211	ENSAPLG00000013869	XRN2	100	93.211	Anas_platyrhynchos
ENSTGUG00000007535	XRN2	100	81.120	ENSACAG00000005565	XRN2	100	81.120	Anolis_carolinensis
ENSTGUG00000007535	XRN2	100	81.942	ENSANAG00000020126	XRN2	100	81.524	Aotus_nancymaae
ENSTGUG00000007535	XRN2	90	71.889	ENSACLG00000010522	xrn2	97	71.889	Astatotilapia_calliptera
ENSTGUG00000007535	XRN2	100	69.765	ENSAMXG00000018301	xrn2	100	69.765	Astyanax_mexicanus
ENSTGUG00000007535	XRN2	100	81.524	ENSBTAG00000011304	XRN2	100	81.106	Bos_taurus
ENSTGUG00000007535	XRN2	87	52.975	WBGene00006964	xrn-2	88	52.710	Caenorhabditis_elegans
ENSTGUG00000007535	XRN2	100	81.837	ENSCJAG00000005611	XRN2	100	81.420	Callithrix_jacchus
ENSTGUG00000007535	XRN2	100	82.255	ENSCAFG00000005185	XRN2	100	81.837	Canis_familiaris
ENSTGUG00000007535	XRN2	100	82.255	ENSCAFG00020027479	XRN2	100	81.837	Canis_lupus_dingo
ENSTGUG00000007535	XRN2	100	81.628	ENSCHIG00000006921	XRN2	100	81.211	Capra_hircus
ENSTGUG00000007535	XRN2	100	81.420	ENSTSYG00000008315	XRN2	100	81.002	Carlito_syrichta
ENSTGUG00000007535	XRN2	97	69.486	ENSCAPG00000010773	XRN2	99	68.201	Cavia_aperea
ENSTGUG00000007535	XRN2	100	82.359	ENSCPOG00000009407	XRN2	100	81.942	Cavia_porcellus
ENSTGUG00000007535	XRN2	100	81.837	ENSCATG00000040350	XRN2	100	81.420	Cercocebus_atys
ENSTGUG00000007535	XRN2	100	82.672	ENSCLAG00000013419	XRN2	100	82.255	Chinchilla_lanigera
ENSTGUG00000007535	XRN2	100	81.837	ENSCSAG00000011094	XRN2	100	81.420	Chlorocebus_sabaeus
ENSTGUG00000007535	XRN2	68	86.702	ENSCHOG00000013404	XRN2	63	86.702	Choloepus_hoffmanni
ENSTGUG00000007535	XRN2	100	86.785	ENSCPBG00000023533	XRN2	100	86.785	Chrysemys_picta_bellii
ENSTGUG00000007535	XRN2	86	59.069	ENSCING00000022336	-	100	59.547	Ciona_intestinalis
ENSTGUG00000007535	XRN2	87	57.551	ENSCSAVG00000011217	-	100	59.546	Ciona_savignyi
ENSTGUG00000007535	XRN2	100	81.837	ENSCANG00000040240	XRN2	100	81.420	Colobus_angolensis_palliatus
ENSTGUG00000007535	XRN2	98	81.470	ENSCGRG00001010676	Xrn2	99	82.002	Cricetulus_griseus_chok1gshd
ENSTGUG00000007535	XRN2	97	80.300	ENSCGRG00000006378	Xrn2	99	80.407	Cricetulus_griseus_crigri
ENSTGUG00000007535	XRN2	54	71.735	ENSCSEG00000005628	xrn2	100	71.735	Cynoglossus_semilaevis
ENSTGUG00000007535	XRN2	90	70.387	ENSCVAG00000018999	xrn2	98	76.000	Cyprinodon_variegatus
ENSTGUG00000007535	XRN2	100	70.062	ENSDARG00000101900	xrn2	96	78.394	Danio_rerio
ENSTGUG00000007535	XRN2	100	81.837	ENSDNOG00000001895	XRN2	100	81.420	Dasypus_novemcinctus
ENSTGUG00000007535	XRN2	100	80.585	ENSDORG00000005434	Xrn2	100	80.167	Dipodomys_ordii
ENSTGUG00000007535	XRN2	87	54.699	FBgn0031868	Rat1	91	53.526	Drosophila_melanogaster
ENSTGUG00000007535	XRN2	100	71.757	ENSETEG00000001740	XRN2	100	71.339	Echinops_telfairi
ENSTGUG00000007535	XRN2	85	69.444	ENSEBUG00000016136	xrn2	100	69.444	Eptatretus_burgeri
ENSTGUG00000007535	XRN2	100	81.733	ENSEASG00005002484	XRN2	100	81.315	Equus_asinus_asinus
ENSTGUG00000007535	XRN2	94	100.000	ENSECAG00000018988	XRN2	95	100.000	Equus_caballus
ENSTGUG00000007535	XRN2	80	100.000	ENSEEUG00000009265	XRN2	76	100.000	Erinaceus_europaeus
ENSTGUG00000007535	XRN2	100	68.077	ENSELUG00000000552	xrn2	98	69.833	Esox_lucius
ENSTGUG00000007535	XRN2	100	81.942	ENSFCAG00000007970	XRN2	100	81.524	Felis_catus
ENSTGUG00000007535	XRN2	100	96.004	ENSFALG00000004508	XRN2	100	96.004	Ficedula_albicollis
ENSTGUG00000007535	XRN2	100	82.255	ENSFDAG00000016311	XRN2	100	81.837	Fukomys_damarensis
ENSTGUG00000007535	XRN2	54	69.275	ENSFHEG00000013039	xrn2	98	69.275	Fundulus_heteroclitus
ENSTGUG00000007535	XRN2	86	73.455	ENSGMOG00000013436	xrn2	100	73.455	Gadus_morhua
ENSTGUG00000007535	XRN2	100	92.752	ENSGALG00000008372	XRN2	100	92.752	Gallus_gallus
ENSTGUG00000007535	XRN2	90	72.727	ENSGAFG00000014284	xrn2	99	72.727	Gambusia_affinis
ENSTGUG00000007535	XRN2	87	74.430	ENSGACG00000011870	xrn2	99	74.430	Gasterosteus_aculeatus
ENSTGUG00000007535	XRN2	100	86.785	ENSGAGG00000004884	XRN2	100	86.785	Gopherus_agassizii
ENSTGUG00000007535	XRN2	100	81.837	ENSGGOG00000013738	XRN2	100	81.420	Gorilla_gorilla
ENSTGUG00000007535	XRN2	54	72.275	ENSHBUG00000005077	xrn2	94	72.275	Haplochromis_burtoni
ENSTGUG00000007535	XRN2	100	81.420	ENSHGLG00000014831	XRN2	100	80.793	Heterocephalus_glaber_female
ENSTGUG00000007535	XRN2	100	81.420	ENSHGLG00100013130	XRN2	100	80.793	Heterocephalus_glaber_male
ENSTGUG00000007535	XRN2	99	66.867	ENSHCOG00000011994	xrn2	98	68.802	Hippocampus_comes
ENSTGUG00000007535	XRN2	100	68.560	ENSIPUG00000006639	xrn2	100	68.560	Ictalurus_punctatus
ENSTGUG00000007535	XRN2	100	82.359	ENSSTOG00000000589	XRN2	100	81.942	Ictidomys_tridecemlineatus
ENSTGUG00000007535	XRN2	100	81.733	ENSJJAG00000022128	Xrn2	100	81.315	Jaculus_jaculus
ENSTGUG00000007535	XRN2	54	78.988	ENSLBEG00000010041	xrn2	100	78.988	Labrus_bergylta
ENSTGUG00000007535	XRN2	93	74.778	ENSLACG00000008307	XRN2	97	78.563	Latimeria_chalumnae
ENSTGUG00000007535	XRN2	99	71.682	ENSLOCG00000016874	xrn2	100	71.682	Lepisosteus_oculatus
ENSTGUG00000007535	XRN2	100	81.420	ENSLAFG00000014624	XRN2	100	81.002	Loxodonta_africana
ENSTGUG00000007535	XRN2	100	81.837	ENSMFAG00000038122	XRN2	100	81.420	Macaca_fascicularis
ENSTGUG00000007535	XRN2	100	81.837	ENSMMUG00000011405	XRN2	100	81.420	Macaca_mulatta
ENSTGUG00000007535	XRN2	100	81.942	ENSMNEG00000040626	XRN2	100	81.524	Macaca_nemestrina
ENSTGUG00000007535	XRN2	100	81.837	ENSMLEG00000041897	XRN2	100	81.420	Mandrillus_leucophaeus
ENSTGUG00000007535	XRN2	90	74.913	ENSMAMG00000008633	xrn2	97	70.626	Mastacembelus_armatus
ENSTGUG00000007535	XRN2	90	73.848	ENSMZEG00005022362	xrn2	97	73.848	Maylandia_zebra
ENSTGUG00000007535	XRN2	99	91.023	ENSMGAG00000003196	XRN2	98	92.529	Meleagris_gallopavo
ENSTGUG00000007535	XRN2	100	82.150	ENSMAUG00000021842	Xrn2	100	81.733	Mesocricetus_auratus
ENSTGUG00000007535	XRN2	100	81.420	ENSMICG00000008126	XRN2	100	81.002	Microcebus_murinus
ENSTGUG00000007535	XRN2	100	81.609	ENSMOCG00000012588	Xrn2	100	81.714	Microtus_ochrogaster
ENSTGUG00000007535	XRN2	89	73.788	ENSMMOG00000017576	xrn2	96	73.055	Mola_mola
ENSTGUG00000007535	XRN2	100	82.932	ENSMODG00000006163	XRN2	100	82.932	Monodelphis_domestica
ENSTGUG00000007535	XRN2	91	72.328	ENSMALG00000011355	xrn2	99	72.328	Monopterus_albus
ENSTGUG00000007535	XRN2	100	81.191	MGP_CAROLIEiJ_G0024400	Xrn2	100	80.773	Mus_caroli
ENSTGUG00000007535	XRN2	100	81.400	ENSMUSG00000027433	Xrn2	100	80.982	Mus_musculus
ENSTGUG00000007535	XRN2	100	81.296	MGP_PahariEiJ_G0025843	Xrn2	100	80.878	Mus_pahari
ENSTGUG00000007535	XRN2	100	81.400	MGP_SPRETEiJ_G0025318	Xrn2	100	80.982	Mus_spretus
ENSTGUG00000007535	XRN2	100	80.718	ENSMPUG00000001198	XRN2	93	80.308	Mustela_putorius_furo
ENSTGUG00000007535	XRN2	100	82.150	ENSMLUG00000001536	XRN2	100	81.733	Myotis_lucifugus
ENSTGUG00000007535	XRN2	100	82.046	ENSNGAG00000018138	Xrn2	100	81.628	Nannospalax_galili
ENSTGUG00000007535	XRN2	90	74.480	ENSNBRG00000008062	xrn2	97	74.480	Neolamprologus_brichardi
ENSTGUG00000007535	XRN2	100	81.733	ENSNLEG00000009991	XRN2	100	81.315	Nomascus_leucogenys
ENSTGUG00000007535	XRN2	66	95.556	ENSMEUG00000008622	-	67	95.556	Notamacropus_eugenii
ENSTGUG00000007535	XRN2	75	69.792	ENSOPRG00000001397	-	77	69.792	Ochotona_princeps
ENSTGUG00000007535	XRN2	100	82.463	ENSODEG00000010745	-	100	82.046	Octodon_degus
ENSTGUG00000007535	XRN2	98	74.518	ENSODEG00000000860	-	98	75.027	Octodon_degus
ENSTGUG00000007535	XRN2	100	69.294	ENSONIG00000018720	xrn2	100	69.806	Oreochromis_niloticus
ENSTGUG00000007535	XRN2	100	82.341	ENSOANG00000015673	XRN2	100	82.341	Ornithorhynchus_anatinus
ENSTGUG00000007535	XRN2	100	82.046	ENSOCUG00000013468	XRN2	100	81.628	Oryctolagus_cuniculus
ENSTGUG00000007535	XRN2	96	71.413	ENSORLG00000017213	xrn2	96	74.710	Oryzias_latipes
ENSTGUG00000007535	XRN2	96	71.598	ENSORLG00020001824	xrn2	95	71.598	Oryzias_latipes_hni
ENSTGUG00000007535	XRN2	96	70.936	ENSORLG00015019747	xrn2	95	70.936	Oryzias_latipes_hsok
ENSTGUG00000007535	XRN2	89	73.898	ENSOMEG00000019820	xrn2	100	68.528	Oryzias_melastigma
ENSTGUG00000007535	XRN2	100	81.648	ENSOGAG00000001068	XRN2	100	81.230	Otolemur_garnettii
ENSTGUG00000007535	XRN2	97	81.116	ENSOARG00000004443	XRN2	99	80.687	Ovis_aries
ENSTGUG00000007535	XRN2	100	81.837	ENSPPAG00000033549	XRN2	100	81.420	Pan_paniscus
ENSTGUG00000007535	XRN2	100	81.942	ENSPPRG00000008732	XRN2	100	81.524	Panthera_pardus
ENSTGUG00000007535	XRN2	97	81.545	ENSPTIG00000015683	XRN2	97	81.116	Panthera_tigris_altaica
ENSTGUG00000007535	XRN2	100	81.837	ENSPTRG00000013308	XRN2	100	81.420	Pan_troglodytes
ENSTGUG00000007535	XRN2	100	81.837	ENSPANG00000018088	XRN2	100	81.420	Papio_anubis
ENSTGUG00000007535	XRN2	100	69.765	ENSPKIG00000016889	xrn2	94	72.432	Paramormyrops_kingsleyae
ENSTGUG00000007535	XRN2	81	88.052	ENSPSIG00000014666	XRN2	100	88.052	Pelodiscus_sinensis
ENSTGUG00000007535	XRN2	100	81.106	ENSPEMG00000000111	Xrn2	100	80.689	Peromyscus_maniculatus_bairdii
ENSTGUG00000007535	XRN2	100	67.788	ENSPFOG00000004182	xrn2	97	69.652	Poecilia_formosa
ENSTGUG00000007535	XRN2	90	73.188	ENSPLAG00000007351	xrn2	97	73.188	Poecilia_latipinna
ENSTGUG00000007535	XRN2	94	66.559	ENSPMEG00000011798	xrn2	97	68.492	Poecilia_mexicana
ENSTGUG00000007535	XRN2	90	73.157	ENSPREG00000012452	xrn2	99	71.924	Poecilia_reticulata
ENSTGUG00000007535	XRN2	100	81.420	ENSPPYG00000010755	XRN2	100	81.002	Pongo_abelii
ENSTGUG00000007535	XRN2	100	76.979	ENSPCAG00000011191	XRN2	100	76.562	Procavia_capensis
ENSTGUG00000007535	XRN2	100	74.635	ENSPCOG00000016468	XRN2	100	74.217	Propithecus_coquereli
ENSTGUG00000007535	XRN2	93	71.557	ENSPVAG00000004596	XRN2	93	71.532	Pteropus_vampyrus
ENSTGUG00000007535	XRN2	90	71.889	ENSPNYG00000001765	xrn2	97	71.889	Pundamilia_nyererei
ENSTGUG00000007535	XRN2	100	70.102	ENSPNAG00000010956	xrn2	99	70.102	Pygocentrus_nattereri
ENSTGUG00000007535	XRN2	100	81.211	ENSRNOG00000011785	Xrn2	100	81.315	Rattus_norvegicus
ENSTGUG00000007535	XRN2	86	85.419	ENSRBIG00000036193	XRN2	100	85.419	Rhinopithecus_bieti
ENSTGUG00000007535	XRN2	100	81.837	ENSRROG00000044400	XRN2	90	81.420	Rhinopithecus_roxellana
ENSTGUG00000007535	XRN2	68	50.926	YOR048C	RAT1	66	52.174	Saccharomyces_cerevisiae
ENSTGUG00000007535	XRN2	100	81.837	ENSSBOG00000021014	XRN2	100	81.420	Saimiri_boliviensis_boliviensis
ENSTGUG00000007535	XRN2	100	71.649	ENSSFOG00015001091	xrn2	100	71.649	Scleropages_formosus
ENSTGUG00000007535	XRN2	90	74.309	ENSSMAG00000007834	xrn2	96	70.084	Scophthalmus_maximus
ENSTGUG00000007535	XRN2	89	72.254	ENSSDUG00000012802	xrn2	98	71.839	Seriola_dumerili
ENSTGUG00000007535	XRN2	89	74.590	ENSSLDG00000021273	xrn2	97	73.782	Seriola_lalandi_dorsalis
ENSTGUG00000007535	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSTGUG00000007535	XRN2	98	80.085	ENSSPUG00000005485	XRN2	96	80.298	Sphenodon_punctatus
ENSTGUG00000007535	XRN2	100	69.270	ENSSPAG00000016027	xrn2	99	69.836	Stegastes_partitus
ENSTGUG00000007535	XRN2	100	81.315	ENSSSCG00000007109	XRN2	100	80.898	Sus_scrofa
ENSTGUG00000007535	XRN2	90	73.055	ENSTRUG00000015489	xrn2	93	69.612	Takifugu_rubripes
ENSTGUG00000007535	XRN2	100	68.345	ENSTNIG00000010712	xrn2	97	69.691	Tetraodon_nigroviridis
ENSTGUG00000007535	XRN2	100	81.002	ENSTBEG00000004119	XRN2	100	81.106	Tupaia_belangeri
ENSTGUG00000007535	XRN2	93	86.047	ENSTTRG00000009087	XRN2	93	86.047	Tursiops_truncatus
ENSTGUG00000007535	XRN2	100	82.150	ENSUAMG00000024634	XRN2	100	81.733	Ursus_americanus
ENSTGUG00000007535	XRN2	97	81.545	ENSUMAG00000004012	XRN2	95	81.116	Ursus_maritimus
ENSTGUG00000007535	XRN2	89	77.032	ENSVPAG00000010694	XRN2	91	76.561	Vicugna_pacos
ENSTGUG00000007535	XRN2	100	82.255	ENSVVUG00000012178	XRN2	100	81.837	Vulpes_vulpes
ENSTGUG00000007535	XRN2	100	72.832	ENSXETG00000023501	xrn2	100	73.563	Xenopus_tropicalis
ENSTGUG00000007535	XRN2	100	67.278	ENSXMAG00000000242	xrn2	92	77.724	Xiphophorus_maculatus