EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000007575 (Gene tree)
Gene ID: 100190099
Gene Symbol: SNRNP48
Alias: -
Full Name: Taeniopygia guttata small nuclear ribonucleoprotein U11/U12 subunit 48 (SNRNP48)%2C mRNA.
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 7974 bases
Position: chr2:83081698-83089671
Accession: NM_001245535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007802	zf-U11-48K	PF05253.12	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007887	-	1183	-	ENSTGUP00000007802	312 (aa)	-	H0ZB44

Gene Model

Click here to download ENSTGUG00000007575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007575	SNRNP48	92	64.583	ENSG00000168566	SNRNP48	83	64.605	Homo_sapiens
ENSTGUG00000007575	SNRNP48	73	56.410	ENSAPOG00000021430	snrnp48	82	50.662	Acanthochromis_polyacanthus
ENSTGUG00000007575	SNRNP48	93	61.616	ENSAMEG00000017349	SNRNP48	84	61.616	Ailuropoda_melanoleuca
ENSTGUG00000007575	SNRNP48	77	51.440	ENSACIG00000002032	snrnp48	76	47.552	Amphilophus_citrinellus
ENSTGUG00000007575	SNRNP48	76	54.583	ENSAOCG00000010562	snrnp48	83	49.026	Amphiprion_ocellaris
ENSTGUG00000007575	SNRNP48	65	59.024	ENSAPEG00000003231	snrnp48	82	48.867	Amphiprion_percula
ENSTGUG00000007575	SNRNP48	64	59.204	ENSATEG00000020210	snrnp48	78	50.530	Anabas_testudineus
ENSTGUG00000007575	SNRNP48	97	66.774	ENSACAG00000002811	SNRNP48	91	67.442	Anolis_carolinensis
ENSTGUG00000007575	SNRNP48	92	64.236	ENSANAG00000033538	SNRNP48	83	64.261	Aotus_nancymaae
ENSTGUG00000007575	SNRNP48	90	49.117	ENSAMXG00000015309	snrnp48	87	48.667	Astyanax_mexicanus
ENSTGUG00000007575	SNRNP48	92	65.278	ENSBTAG00000001123	SNRNP48	83	64.948	Bos_taurus
ENSTGUG00000007575	SNRNP48	92	64.931	ENSCJAG00000021330	SNRNP48	83	64.948	Callithrix_jacchus
ENSTGUG00000007575	SNRNP48	93	64.261	ENSCAFG00000009574	SNRNP48	70	64.261	Canis_familiaris
ENSTGUG00000007575	SNRNP48	95	63.514	ENSCAFG00020013203	SNRNP48	85	63.514	Canis_lupus_dingo
ENSTGUG00000007575	SNRNP48	92	63.889	ENSCHIG00000015216	SNRNP48	83	63.574	Capra_hircus
ENSTGUG00000007575	SNRNP48	93	64.014	ENSTSYG00000000698	SNRNP48	83	63.918	Carlito_syrichta
ENSTGUG00000007575	SNRNP48	93	65.636	ENSCAPG00000006768	SNRNP48	92	65.636	Cavia_aperea
ENSTGUG00000007575	SNRNP48	92	65.278	ENSCPOG00000007910	SNRNP48	83	65.292	Cavia_porcellus
ENSTGUG00000007575	SNRNP48	92	64.236	ENSCCAG00000035652	SNRNP48	83	64.846	Cebus_capucinus
ENSTGUG00000007575	SNRNP48	92	64.583	ENSCATG00000033947	SNRNP48	83	64.605	Cercocebus_atys
ENSTGUG00000007575	SNRNP48	92	65.972	ENSCLAG00000003765	SNRNP48	83	65.292	Chinchilla_lanigera
ENSTGUG00000007575	SNRNP48	93	64.948	ENSCSAG00000007409	SNRNP48	83	64.948	Chlorocebus_sabaeus
ENSTGUG00000007575	SNRNP48	100	73.030	ENSCPBG00000019146	SNRNP48	92	75.410	Chrysemys_picta_bellii
ENSTGUG00000007575	SNRNP48	65	34.783	ENSCING00000004121	-	62	34.783	Ciona_intestinalis
ENSTGUG00000007575	SNRNP48	92	64.583	ENSCANG00000030017	SNRNP48	83	64.605	Colobus_angolensis_palliatus
ENSTGUG00000007575	SNRNP48	93	52.414	ENSCGRG00001008805	-	82	52.414	Cricetulus_griseus_chok1gshd
ENSTGUG00000007575	SNRNP48	93	63.230	ENSCGRG00001001076	-	83	63.230	Cricetulus_griseus_chok1gshd
ENSTGUG00000007575	SNRNP48	93	63.230	ENSCGRG00000007781	Snrnp48	83	63.230	Cricetulus_griseus_crigri
ENSTGUG00000007575	SNRNP48	65	54.854	ENSCSEG00000000722	snrnp48	74	47.985	Cynoglossus_semilaevis
ENSTGUG00000007575	SNRNP48	92	49.310	ENSCVAG00000019829	snrnp48	81	46.130	Cyprinodon_variegatus
ENSTGUG00000007575	SNRNP48	80	51.172	ENSDARG00000039989	snrnp48	81	49.477	Danio_rerio
ENSTGUG00000007575	SNRNP48	93	63.574	ENSDNOG00000014978	SNRNP48	83	63.574	Dasypus_novemcinctus
ENSTGUG00000007575	SNRNP48	93	62.284	ENSDORG00000015140	Snrnp48	83	61.856	Dipodomys_ordii
ENSTGUG00000007575	SNRNP48	93	62.887	ENSEASG00005012021	SNRNP48	83	62.887	Equus_asinus_asinus
ENSTGUG00000007575	SNRNP48	93	63.230	ENSECAG00000026937	SNRNP48	83	63.230	Equus_caballus
ENSTGUG00000007575	SNRNP48	93	47.782	ENSEEUG00000015437	SNRNP48	83	47.782	Erinaceus_europaeus
ENSTGUG00000007575	SNRNP48	86	52.963	ENSELUG00000009766	snrnp48	82	49.333	Esox_lucius
ENSTGUG00000007575	SNRNP48	93	64.014	ENSFCAG00000018853	SNRNP48	85	63.423	Felis_catus
ENSTGUG00000007575	SNRNP48	100	90.415	ENSFALG00000007797	SNRNP48	95	93.243	Ficedula_albicollis
ENSTGUG00000007575	SNRNP48	93	63.918	ENSFDAG00000009231	SNRNP48	83	63.918	Fukomys_damarensis
ENSTGUG00000007575	SNRNP48	64	58.416	ENSFHEG00000014647	snrnp48	90	49.466	Fundulus_heteroclitus
ENSTGUG00000007575	SNRNP48	63	56.716	ENSGMOG00000018599	-	87	45.907	Gadus_morhua
ENSTGUG00000007575	SNRNP48	91	87.676	ENSGALG00000013005	SNRNP48	93	88.448	Gallus_gallus
ENSTGUG00000007575	SNRNP48	65	57.843	ENSGAFG00000021639	snrnp48	78	49.643	Gambusia_affinis
ENSTGUG00000007575	SNRNP48	64	58.416	ENSGACG00000017756	-	83	49.502	Gasterosteus_aculeatus
ENSTGUG00000007575	SNRNP48	93	76.174	ENSGAGG00000000865	SNRNP48	97	76.174	Gopherus_agassizii
ENSTGUG00000007575	SNRNP48	92	64.583	ENSGGOG00000013220	SNRNP48	83	64.605	Gorilla_gorilla
ENSTGUG00000007575	SNRNP48	66	58.571	ENSHBUG00000017066	snrnp48	84	48.658	Haplochromis_burtoni
ENSTGUG00000007575	SNRNP48	93	64.261	ENSHGLG00000015241	SNRNP48	83	64.261	Heterocephalus_glaber_female
ENSTGUG00000007575	SNRNP48	93	64.261	ENSHGLG00100010027	SNRNP48	83	64.261	Heterocephalus_glaber_male
ENSTGUG00000007575	SNRNP48	66	55.769	ENSHCOG00000014066	snrnp48	82	47.635	Hippocampus_comes
ENSTGUG00000007575	SNRNP48	93	64.261	ENSSTOG00000014635	SNRNP48	83	64.261	Ictidomys_tridecemlineatus
ENSTGUG00000007575	SNRNP48	93	62.199	ENSJJAG00000011495	Snrnp48	83	62.199	Jaculus_jaculus
ENSTGUG00000007575	SNRNP48	64	56.219	ENSKMAG00000016514	snrnp48	77	48.763	Kryptolebias_marmoratus
ENSTGUG00000007575	SNRNP48	65	57.353	ENSLBEG00000026249	snrnp48	76	49.819	Labrus_bergylta
ENSTGUG00000007575	SNRNP48	93	57.807	ENSLACG00000003958	SNRNP48	86	57.807	Latimeria_chalumnae
ENSTGUG00000007575	SNRNP48	92	53.242	ENSLOCG00000004187	snrnp48	82	53.559	Lepisosteus_oculatus
ENSTGUG00000007575	SNRNP48	92	62.847	ENSLAFG00000011152	SNRNP48	83	62.887	Loxodonta_africana
ENSTGUG00000007575	SNRNP48	92	64.931	ENSMFAG00000045216	SNRNP48	83	64.948	Macaca_fascicularis
ENSTGUG00000007575	SNRNP48	92	64.931	ENSMMUG00000014785	SNRNP48	83	64.948	Macaca_mulatta
ENSTGUG00000007575	SNRNP48	92	64.931	ENSMNEG00000042269	SNRNP48	83	64.948	Macaca_nemestrina
ENSTGUG00000007575	SNRNP48	92	64.931	ENSMLEG00000034004	SNRNP48	83	64.948	Mandrillus_leucophaeus
ENSTGUG00000007575	SNRNP48	65	55.610	ENSMAMG00000018673	snrnp48	72	46.801	Mastacembelus_armatus
ENSTGUG00000007575	SNRNP48	92	86.942	ENSMGAG00000006037	SNRNP48	99	86.942	Meleagris_gallopavo
ENSTGUG00000007575	SNRNP48	93	63.230	ENSMAUG00000011944	Snrnp48	83	63.230	Mesocricetus_auratus
ENSTGUG00000007575	SNRNP48	92	64.236	ENSMICG00000012497	SNRNP48	83	64.261	Microcebus_murinus
ENSTGUG00000007575	SNRNP48	93	63.230	ENSMOCG00000015555	Snrnp48	83	63.230	Microtus_ochrogaster
ENSTGUG00000007575	SNRNP48	59	57.527	ENSMMOG00000003072	-	58	57.527	Mola_mola
ENSTGUG00000007575	SNRNP48	79	71.600	ENSMODG00000009996	SNRNP48	80	69.360	Monodelphis_domestica
ENSTGUG00000007575	SNRNP48	65	57.767	ENSMALG00000005725	snrnp48	81	50.000	Monopterus_albus
ENSTGUG00000007575	SNRNP48	93	62.116	MGP_CAROLIEiJ_G0018441	Snrnp48	83	62.116	Mus_caroli
ENSTGUG00000007575	SNRNP48	93	61.433	ENSMUSG00000021431	Snrnp48	83	61.433	Mus_musculus
ENSTGUG00000007575	SNRNP48	93	62.799	MGP_PahariEiJ_G0019509	Snrnp48	83	62.799	Mus_pahari
ENSTGUG00000007575	SNRNP48	93	61.775	MGP_SPRETEiJ_G0019321	Snrnp48	83	61.775	Mus_spretus
ENSTGUG00000007575	SNRNP48	93	62.887	ENSNGAG00000004849	Snrnp48	83	62.887	Nannospalax_galili
ENSTGUG00000007575	SNRNP48	66	58.571	ENSNBRG00000012127	snrnp48	82	49.020	Neolamprologus_brichardi
ENSTGUG00000007575	SNRNP48	92	64.583	ENSNLEG00000011667	SNRNP48	83	64.605	Nomascus_leucogenys
ENSTGUG00000007575	SNRNP48	89	61.151	ENSOPRG00000015471	SNRNP48	84	61.511	Ochotona_princeps
ENSTGUG00000007575	SNRNP48	91	50.174	ENSONIG00000001520	snrnp48	81	50.495	Oreochromis_niloticus
ENSTGUG00000007575	SNRNP48	82	68.750	ENSOCUG00000005168	SNRNP48	82	68.605	Oryctolagus_cuniculus
ENSTGUG00000007575	SNRNP48	84	52.830	ENSORLG00000015654	snrnp48	80	50.331	Oryzias_latipes
ENSTGUG00000007575	SNRNP48	84	52.075	ENSORLG00020015976	snrnp48	68	49.669	Oryzias_latipes_hni
ENSTGUG00000007575	SNRNP48	84	52.852	ENSORLG00015022379	snrnp48	69	50.331	Oryzias_latipes_hsok
ENSTGUG00000007575	SNRNP48	78	55.466	ENSOMEG00000022007	snrnp48	81	50.662	Oryzias_melastigma
ENSTGUG00000007575	SNRNP48	88	63.370	ENSOGAG00000005275	SNRNP48	83	62.544	Otolemur_garnettii
ENSTGUG00000007575	SNRNP48	93	63.918	ENSOARG00000017319	SNRNP48	99	63.918	Ovis_aries
ENSTGUG00000007575	SNRNP48	92	64.583	ENSPPAG00000032873	SNRNP48	83	64.605	Pan_paniscus
ENSTGUG00000007575	SNRNP48	93	64.014	ENSPPRG00000004283	SNRNP48	83	64.605	Panthera_pardus
ENSTGUG00000007575	SNRNP48	93	64.014	ENSPTIG00000013502	SNRNP48	98	64.605	Panthera_tigris_altaica
ENSTGUG00000007575	SNRNP48	92	64.583	ENSPTRG00000017703	SNRNP48	83	64.605	Pan_troglodytes
ENSTGUG00000007575	SNRNP48	92	64.931	ENSPANG00000000771	SNRNP48	83	64.948	Papio_anubis
ENSTGUG00000007575	SNRNP48	92	49.829	ENSPKIG00000013703	snrnp48	61	49.829	Paramormyrops_kingsleyae
ENSTGUG00000007575	SNRNP48	93	74.411	ENSPSIG00000002213	SNRNP48	94	75.758	Pelodiscus_sinensis
ENSTGUG00000007575	SNRNP48	71	49.550	ENSPMGG00000008120	snrnp48	73	53.589	Periophthalmus_magnuspinnatus
ENSTGUG00000007575	SNRNP48	93	63.574	ENSPEMG00000008872	Snrnp48	83	63.574	Peromyscus_maniculatus_bairdii
ENSTGUG00000007575	SNRNP48	68	56.075	ENSPFOG00000003578	snrnp48	79	48.763	Poecilia_formosa
ENSTGUG00000007575	SNRNP48	62	54.639	ENSPLAG00000002290	snrnp48	66	54.124	Poecilia_latipinna
ENSTGUG00000007575	SNRNP48	68	56.075	ENSPMEG00000018033	snrnp48	79	48.763	Poecilia_mexicana
ENSTGUG00000007575	SNRNP48	67	55.924	ENSPREG00000018541	snrnp48	78	48.814	Poecilia_reticulata
ENSTGUG00000007575	SNRNP48	92	63.542	ENSPPYG00000016209	SNRNP48	83	63.574	Pongo_abelii
ENSTGUG00000007575	SNRNP48	65	53.202	ENSPCAG00000011991	SNRNP48	77	53.398	Procavia_capensis
ENSTGUG00000007575	SNRNP48	92	63.889	ENSPVAG00000002854	SNRNP48	83	63.918	Pteropus_vampyrus
ENSTGUG00000007575	SNRNP48	66	58.571	ENSPNYG00000015399	snrnp48	83	50.877	Pundamilia_nyererei
ENSTGUG00000007575	SNRNP48	95	63.545	ENSRNOG00000013756	Snrnp48	86	63.545	Rattus_norvegicus
ENSTGUG00000007575	SNRNP48	82	68.093	ENSRBIG00000043856	SNRNP48	80	68.077	Rhinopithecus_bieti
ENSTGUG00000007575	SNRNP48	92	64.583	ENSRROG00000043229	SNRNP48	83	64.605	Rhinopithecus_roxellana
ENSTGUG00000007575	SNRNP48	92	64.583	ENSSBOG00000019486	SNRNP48	83	64.605	Saimiri_boliviensis_boliviensis
ENSTGUG00000007575	SNRNP48	94	69.831	ENSSHAG00000014483	SNRNP48	84	69.831	Sarcophilus_harrisii
ENSTGUG00000007575	SNRNP48	66	59.524	ENSSFOG00015006610	snrnp48	68	53.512	Scleropages_formosus
ENSTGUG00000007575	SNRNP48	79	53.386	ENSSDUG00000014953	snrnp48	77	51.418	Seriola_dumerili
ENSTGUG00000007575	SNRNP48	79	52.988	ENSSLDG00000005989	snrnp48	76	51.064	Seriola_lalandi_dorsalis
ENSTGUG00000007575	SNRNP48	100	68.224	ENSSPUG00000006257	SNRNP48	86	70.297	Sphenodon_punctatus
ENSTGUG00000007575	SNRNP48	66	56.667	ENSSPAG00000006454	snrnp48	78	50.173	Stegastes_partitus
ENSTGUG00000007575	SNRNP48	64	54.726	ENSTRUG00000007031	snrnp48	85	46.622	Takifugu_rubripes
ENSTGUG00000007575	SNRNP48	94	45.875	ENSTNIG00000012977	-	79	45.875	Tetraodon_nigroviridis
ENSTGUG00000007575	SNRNP48	66	69.417	ENSTBEG00000015620	SNRNP48	61	69.417	Tupaia_belangeri
ENSTGUG00000007575	SNRNP48	92	64.236	ENSTTRG00000016715	SNRNP48	83	63.918	Tursiops_truncatus
ENSTGUG00000007575	SNRNP48	93	62.543	ENSUAMG00000003690	SNRNP48	84	62.543	Ursus_americanus
ENSTGUG00000007575	SNRNP48	93	62.887	ENSVPAG00000003557	SNRNP48	99	62.887	Vicugna_pacos
ENSTGUG00000007575	SNRNP48	95	62.838	ENSVVUG00000004996	SNRNP48	85	62.838	Vulpes_vulpes
ENSTGUG00000007575	SNRNP48	82	56.589	ENSXETG00000020447	snrnp48	86	54.153	Xenopus_tropicalis
ENSTGUG00000007575	SNRNP48	62	56.410	ENSXCOG00000004478	snrnp48	59	55.897	Xiphophorus_couchianus
ENSTGUG00000007575	SNRNP48	68	57.209	ENSXMAG00000013595	snrnp48	80	50.000	Xiphophorus_maculatus