EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000007645 (Gene tree)
Gene ID: 100219081
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 9393 bases
Position: chr3:29561549-29570941
Accession: 100219081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007887	HAT	PF02184.16	8e-37	1	2
ENSTGUP00000007887	HAT	PF02184.16	8e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000007972	CRNKL1-201	2094	XM_002197327	ENSTGUP00000007887	698 (aa)	XP_002197363	H0ZBC9

Gene Model

Click here to download ENSTGUG00000007645's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007645	CRNKL1	98	91.837	ENSG00000101343	CRNKL1	99	91.837	Homo_sapiens
ENSTGUG00000007645	CRNKL1	98	85.735	ENSAPOG00000009705	crnkl1	97	86.222	Acanthochromis_polyacanthus
ENSTGUG00000007645	CRNKL1	98	92.658	ENSAMEG00000000270	CRNKL1	83	92.711	Ailuropoda_melanoleuca
ENSTGUG00000007645	CRNKL1	96	86.826	ENSACIG00000015267	crnkl1	89	86.826	Amphilophus_citrinellus
ENSTGUG00000007645	CRNKL1	98	85.881	ENSAOCG00000021964	crnkl1	91	85.881	Amphiprion_ocellaris
ENSTGUG00000007645	CRNKL1	98	85.735	ENSAPEG00000015041	crnkl1	91	85.735	Amphiprion_percula
ENSTGUG00000007645	CRNKL1	98	85.756	ENSATEG00000001068	crnkl1	89	85.756	Anabas_testudineus
ENSTGUG00000007645	CRNKL1	99	93.469	ENSAPLG00000013105	CRNKL1	99	93.723	Anas_platyrhynchos
ENSTGUG00000007645	CRNKL1	98	91.971	ENSACAG00000005284	CRNKL1	99	91.971	Anolis_carolinensis
ENSTGUG00000007645	CRNKL1	90	92.710	ENSANAG00000024889	CRNKL1	99	92.710	Aotus_nancymaae
ENSTGUG00000007645	CRNKL1	98	85.944	ENSACLG00000010813	crnkl1	88	87.575	Astatotilapia_calliptera
ENSTGUG00000007645	CRNKL1	95	87.538	ENSAMXG00000018334	crnkl1	90	87.612	Astyanax_mexicanus
ENSTGUG00000007645	CRNKL1	98	91.691	ENSBTAG00000008472	CRNKL1	99	91.691	Bos_taurus
ENSTGUG00000007645	CRNKL1	92	61.586	WBGene00019762	M03F8.3	91	61.119	Caenorhabditis_elegans
ENSTGUG00000007645	CRNKL1	98	91.691	ENSCJAG00000005393	CRNKL1	99	91.691	Callithrix_jacchus
ENSTGUG00000007645	CRNKL1	99	89.787	ENSCAFG00000005333	CRNKL1	94	92.420	Canis_familiaris
ENSTGUG00000007645	CRNKL1	98	92.420	ENSCAFG00020027488	CRNKL1	99	92.420	Canis_lupus_dingo
ENSTGUG00000007645	CRNKL1	98	90.816	ENSCHIG00000013171	CRNKL1	99	90.816	Capra_hircus
ENSTGUG00000007645	CRNKL1	98	91.691	ENSTSYG00000004197	CRNKL1	99	91.691	Carlito_syrichta
ENSTGUG00000007645	CRNKL1	94	90.484	ENSCAPG00000010501	CRNKL1	99	90.484	Cavia_aperea
ENSTGUG00000007645	CRNKL1	98	91.108	ENSCPOG00000004418	CRNKL1	99	91.108	Cavia_porcellus
ENSTGUG00000007645	CRNKL1	98	91.691	ENSCCAG00000027037	CRNKL1	99	91.691	Cebus_capucinus
ENSTGUG00000007645	CRNKL1	98	91.691	ENSCATG00000034247	CRNKL1	99	91.691	Cercocebus_atys
ENSTGUG00000007645	CRNKL1	98	91.545	ENSCLAG00000013859	CRNKL1	99	91.545	Chinchilla_lanigera
ENSTGUG00000007645	CRNKL1	98	91.691	ENSCSAG00000011434	CRNKL1	99	91.691	Chlorocebus_sabaeus
ENSTGUG00000007645	CRNKL1	98	91.777	ENSCHOG00000006371	CRNKL1	84	91.837	Choloepus_hoffmanni
ENSTGUG00000007645	CRNKL1	98	93.013	ENSCPBG00000023501	CRNKL1	100	93.013	Chrysemys_picta_bellii
ENSTGUG00000007645	CRNKL1	95	68.271	ENSCING00000002709	-	98	67.359	Ciona_intestinalis
ENSTGUG00000007645	CRNKL1	98	91.837	ENSCANG00000038789	CRNKL1	99	91.837	Colobus_angolensis_palliatus
ENSTGUG00000007645	CRNKL1	98	91.837	ENSCGRG00001001115	-	99	91.837	Cricetulus_griseus_chok1gshd
ENSTGUG00000007645	CRNKL1	98	91.837	ENSCGRG00001000687	-	99	91.837	Cricetulus_griseus_chok1gshd
ENSTGUG00000007645	CRNKL1	98	91.837	ENSCGRG00000007854	Crnkl1	99	91.837	Cricetulus_griseus_crigri
ENSTGUG00000007645	CRNKL1	97	86.115	ENSCSEG00000005594	crnkl1	86	86.115	Cynoglossus_semilaevis
ENSTGUG00000007645	CRNKL1	96	86.976	ENSCVAG00000015172	crnkl1	90	86.976	Cyprinodon_variegatus
ENSTGUG00000007645	CRNKL1	95	86.446	ENSDARG00000007901	crnkl1	90	85.255	Danio_rerio
ENSTGUG00000007645	CRNKL1	98	92.679	ENSDNOG00000016226	CRNKL1	95	92.679	Dasypus_novemcinctus
ENSTGUG00000007645	CRNKL1	96	84.006	ENSDORG00000030174	-	99	84.006	Dipodomys_ordii
ENSTGUG00000007645	CRNKL1	95	84.858	ENSDORG00000023724	-	99	83.976	Dipodomys_ordii
ENSTGUG00000007645	CRNKL1	98	90.883	ENSDORG00000000394	-	99	90.883	Dipodomys_ordii
ENSTGUG00000007645	CRNKL1	95	68.955	FBgn0000377	crn	95	68.955	Drosophila_melanogaster
ENSTGUG00000007645	CRNKL1	98	80.466	ENSETEG00000003711	CRNKL1	84	80.466	Echinops_telfairi
ENSTGUG00000007645	CRNKL1	98	60.558	ENSEBUG00000013461	crnkl1	96	60.558	Eptatretus_burgeri
ENSTGUG00000007645	CRNKL1	98	92.566	ENSEASG00005002072	CRNKL1	99	92.566	Equus_asinus_asinus
ENSTGUG00000007645	CRNKL1	98	92.566	ENSECAG00000022215	CRNKL1	99	92.566	Equus_caballus
ENSTGUG00000007645	CRNKL1	98	89.721	ENSEEUG00000000413	CRNKL1	92	89.796	Erinaceus_europaeus
ENSTGUG00000007645	CRNKL1	96	86.140	ENSELUG00000015424	crnkl1	97	84.425	Esox_lucius
ENSTGUG00000007645	CRNKL1	98	92.711	ENSFCAG00000000714	CRNKL1	99	92.711	Felis_catus
ENSTGUG00000007645	CRNKL1	96	97.768	ENSFALG00000004611	CRNKL1	100	97.768	Ficedula_albicollis
ENSTGUG00000007645	CRNKL1	98	91.947	ENSFDAG00000000604	CRNKL1	99	91.691	Fukomys_damarensis
ENSTGUG00000007645	CRNKL1	96	86.826	ENSFHEG00000013163	crnkl1	87	86.826	Fundulus_heteroclitus
ENSTGUG00000007645	CRNKL1	96	85.202	ENSGMOG00000007609	crnkl1	94	83.552	Gadus_morhua
ENSTGUG00000007645	CRNKL1	98	95.633	ENSGALG00000008429	CRNKL1	100	95.633	Gallus_gallus
ENSTGUG00000007645	CRNKL1	96	86.716	ENSGAFG00000014249	crnkl1	88	86.826	Gambusia_affinis
ENSTGUG00000007645	CRNKL1	96	85.778	ENSGACG00000011852	crnkl1	89	85.778	Gasterosteus_aculeatus
ENSTGUG00000007645	CRNKL1	94	91.629	ENSGAGG00000021233	CRNKL1	100	91.681	Gopherus_agassizii
ENSTGUG00000007645	CRNKL1	98	91.837	ENSGGOG00000014176	CRNKL1	99	91.837	Gorilla_gorilla
ENSTGUG00000007645	CRNKL1	97	86.303	ENSHBUG00000005246	crnkl1	88	87.425	Haplochromis_burtoni
ENSTGUG00000007645	CRNKL1	98	91.691	ENSHGLG00000010856	CRNKL1	99	91.691	Heterocephalus_glaber_female
ENSTGUG00000007645	CRNKL1	98	91.691	ENSHGLG00100011521	CRNKL1	99	91.691	Heterocephalus_glaber_male
ENSTGUG00000007645	CRNKL1	96	84.948	ENSHCOG00000006420	crnkl1	98	83.772	Hippocampus_comes
ENSTGUG00000007645	CRNKL1	93	86.903	ENSIPUG00000006751	crnkl1	93	85.075	Ictalurus_punctatus
ENSTGUG00000007645	CRNKL1	95	74.849	ENSIPUG00000006836	-	98	74.627	Ictalurus_punctatus
ENSTGUG00000007645	CRNKL1	91	68.760	ENSIPUG00000000315	-	99	69.969	Ictalurus_punctatus
ENSTGUG00000007645	CRNKL1	98	92.128	ENSSTOG00000014747	CRNKL1	99	92.128	Ictidomys_tridecemlineatus
ENSTGUG00000007645	CRNKL1	98	90.300	ENSJJAG00000016926	Crnkl1	99	90.300	Jaculus_jaculus
ENSTGUG00000007645	CRNKL1	98	85.965	ENSKMAG00000003620	crnkl1	86	85.965	Kryptolebias_marmoratus
ENSTGUG00000007645	CRNKL1	96	61.905	ENSLBEG00000003543	crnkl1	92	70.845	Labrus_bergylta
ENSTGUG00000007645	CRNKL1	98	87.445	ENSLACG00000001129	CRNKL1	100	87.445	Latimeria_chalumnae
ENSTGUG00000007645	CRNKL1	95	89.339	ENSLOCG00000016889	crnkl1	95	87.609	Lepisosteus_oculatus
ENSTGUG00000007645	CRNKL1	98	91.412	ENSLAFG00000004512	CRNKL1	99	92.140	Loxodonta_africana
ENSTGUG00000007645	CRNKL1	98	91.691	ENSMFAG00000039893	CRNKL1	99	91.691	Macaca_fascicularis
ENSTGUG00000007645	CRNKL1	98	91.691	ENSMMUG00000007709	CRNKL1	99	91.691	Macaca_mulatta
ENSTGUG00000007645	CRNKL1	98	91.691	ENSMNEG00000037490	CRNKL1	99	91.691	Macaca_nemestrina
ENSTGUG00000007645	CRNKL1	98	91.691	ENSMLEG00000034885	CRNKL1	99	91.691	Mandrillus_leucophaeus
ENSTGUG00000007645	CRNKL1	98	85.777	ENSMAMG00000008757	crnkl1	90	85.777	Mastacembelus_armatus
ENSTGUG00000007645	CRNKL1	97	86.451	ENSMZEG00005022345	crnkl1	89	87.575	Maylandia_zebra
ENSTGUG00000007645	CRNKL1	100	95.129	ENSMGAG00000003452	CRNKL1	94	96.076	Meleagris_gallopavo
ENSTGUG00000007645	CRNKL1	98	91.691	ENSMAUG00000020764	Crnkl1	99	91.691	Mesocricetus_auratus
ENSTGUG00000007645	CRNKL1	98	92.128	ENSMICG00000006048	CRNKL1	99	92.128	Microcebus_murinus
ENSTGUG00000007645	CRNKL1	98	84.505	ENSMOCG00000000681	-	99	84.505	Microtus_ochrogaster
ENSTGUG00000007645	CRNKL1	95	65.564	ENSMOCG00000004179	-	95	65.676	Microtus_ochrogaster
ENSTGUG00000007645	CRNKL1	91	85.466	ENSMMOG00000017601	crnkl1	97	85.466	Mola_mola
ENSTGUG00000007645	CRNKL1	98	89.625	ENSMODG00000005961	-	99	89.625	Monodelphis_domestica
ENSTGUG00000007645	CRNKL1	98	84.694	ENSMODG00000010857	-	99	84.694	Monodelphis_domestica
ENSTGUG00000007645	CRNKL1	97	62.998	ENSMALG00000011211	crnkl1	88	63.274	Monopterus_albus
ENSTGUG00000007645	CRNKL1	98	91.837	MGP_CAROLIEiJ_G0024394	Crnkl1	99	91.837	Mus_caroli
ENSTGUG00000007645	CRNKL1	98	91.983	ENSMUSG00000001767	Crnkl1	99	91.983	Mus_musculus
ENSTGUG00000007645	CRNKL1	98	90.671	MGP_PahariEiJ_G0025838	Crnkl1	99	90.671	Mus_pahari
ENSTGUG00000007645	CRNKL1	98	91.983	MGP_SPRETEiJ_G0025312	Crnkl1	99	91.983	Mus_spretus
ENSTGUG00000007645	CRNKL1	98	92.857	ENSMPUG00000001226	CRNKL1	99	92.857	Mustela_putorius_furo
ENSTGUG00000007645	CRNKL1	98	92.658	ENSMLUG00000016513	CRNKL1	89	92.711	Myotis_lucifugus
ENSTGUG00000007645	CRNKL1	98	90.258	ENSNGAG00000023097	Crnkl1	99	90.258	Nannospalax_galili
ENSTGUG00000007645	CRNKL1	97	86.598	ENSNBRG00000007867	crnkl1	88	87.725	Neolamprologus_brichardi
ENSTGUG00000007645	CRNKL1	98	88.192	ENSNLEG00000009862	CRNKL1	99	88.192	Nomascus_leucogenys
ENSTGUG00000007645	CRNKL1	98	84.425	ENSMEUG00000002361	-	99	84.425	Notamacropus_eugenii
ENSTGUG00000007645	CRNKL1	96	91.803	ENSMEUG00000012167	-	100	91.803	Notamacropus_eugenii
ENSTGUG00000007645	CRNKL1	85	61.804	ENSOPRG00000009242	-	62	61.804	Ochotona_princeps
ENSTGUG00000007645	CRNKL1	98	91.691	ENSODEG00000012175	CRNKL1	99	91.691	Octodon_degus
ENSTGUG00000007645	CRNKL1	96	87.575	ENSONIG00000018728	crnkl1	88	87.575	Oreochromis_niloticus
ENSTGUG00000007645	CRNKL1	99	90.129	ENSOCUG00000015484	CRNKL1	82	91.971	Oryctolagus_cuniculus
ENSTGUG00000007645	CRNKL1	96	84.880	ENSORLG00000017240	crnkl1	94	81.602	Oryzias_latipes
ENSTGUG00000007645	CRNKL1	96	85.030	ENSORLG00020001742	crnkl1	100	85.030	Oryzias_latipes_hni
ENSTGUG00000007645	CRNKL1	96	85.030	ENSORLG00015019564	crnkl1	89	85.030	Oryzias_latipes_hsok
ENSTGUG00000007645	CRNKL1	98	83.772	ENSOMEG00000019895	crnkl1	91	83.772	Oryzias_melastigma
ENSTGUG00000007645	CRNKL1	98	91.691	ENSOGAG00000011544	CRNKL1	99	91.691	Otolemur_garnettii
ENSTGUG00000007645	CRNKL1	98	91.924	ENSOARG00000002150	CRNKL1	89	91.983	Ovis_aries
ENSTGUG00000007645	CRNKL1	98	90.455	ENSPPAG00000027847	CRNKL1	83	90.525	Pan_paniscus
ENSTGUG00000007645	CRNKL1	98	92.711	ENSPPRG00000001955	CRNKL1	99	92.711	Panthera_pardus
ENSTGUG00000007645	CRNKL1	98	92.711	ENSPTIG00000007393	CRNKL1	99	92.711	Panthera_tigris_altaica
ENSTGUG00000007645	CRNKL1	98	91.691	ENSPTRG00000030609	CRNKL1	99	91.691	Pan_troglodytes
ENSTGUG00000007645	CRNKL1	98	91.691	ENSPANG00000017420	CRNKL1	99	91.691	Papio_anubis
ENSTGUG00000007645	CRNKL1	95	82.883	ENSPKIG00000017093	crnkl1	89	81.991	Paramormyrops_kingsleyae
ENSTGUG00000007645	CRNKL1	98	91.813	ENSPSIG00000012705	CRNKL1	99	91.813	Pelodiscus_sinensis
ENSTGUG00000007645	CRNKL1	98	78.540	ENSPMGG00000006263	crnkl1	96	78.540	Periophthalmus_magnuspinnatus
ENSTGUG00000007645	CRNKL1	98	92.128	ENSPEMG00000000073	-	99	92.128	Peromyscus_maniculatus_bairdii
ENSTGUG00000007645	CRNKL1	98	81.858	ENSPMAG00000002250	crnkl1	99	81.858	Petromyzon_marinus
ENSTGUG00000007645	CRNKL1	99	90.517	ENSPCIG00000025825	CRNKL1	96	91.545	Phascolarctos_cinereus
ENSTGUG00000007645	CRNKL1	96	86.677	ENSPFOG00000005102	crnkl1	90	86.677	Poecilia_formosa
ENSTGUG00000007645	CRNKL1	96	86.567	ENSPLAG00000007288	crnkl1	87	86.677	Poecilia_latipinna
ENSTGUG00000007645	CRNKL1	96	86.826	ENSPMEG00000008865	crnkl1	91	86.826	Poecilia_mexicana
ENSTGUG00000007645	CRNKL1	96	86.377	ENSPREG00000012615	crnkl1	92	84.548	Poecilia_reticulata
ENSTGUG00000007645	CRNKL1	98	91.777	ENSPPYG00000010747	CRNKL1	81	91.837	Pongo_abelii
ENSTGUG00000007645	CRNKL1	98	86.637	ENSPCAG00000003296	CRNKL1	85	86.735	Procavia_capensis
ENSTGUG00000007645	CRNKL1	98	91.336	ENSPCOG00000017608	CRNKL1	83	91.399	Propithecus_coquereli
ENSTGUG00000007645	CRNKL1	98	92.070	ENSPVAG00000006207	CRNKL1	83	92.128	Pteropus_vampyrus
ENSTGUG00000007645	CRNKL1	97	86.303	ENSPNYG00000001977	crnkl1	88	87.425	Pundamilia_nyererei
ENSTGUG00000007645	CRNKL1	96	88.095	ENSPNAG00000001507	crnkl1	98	84.012	Pygocentrus_nattereri
ENSTGUG00000007645	CRNKL1	98	91.983	ENSRNOG00000010587	Crnkl1	99	91.983	Rattus_norvegicus
ENSTGUG00000007645	CRNKL1	98	91.691	ENSRNOG00000040045	Crnkl1	99	91.691	Rattus_norvegicus
ENSTGUG00000007645	CRNKL1	98	91.545	ENSRBIG00000031770	CRNKL1	99	91.545	Rhinopithecus_bieti
ENSTGUG00000007645	CRNKL1	98	91.399	ENSRROG00000040450	CRNKL1	99	91.399	Rhinopithecus_roxellana
ENSTGUG00000007645	CRNKL1	93	37.337	YLR117C	CLF1	99	37.428	Saccharomyces_cerevisiae
ENSTGUG00000007645	CRNKL1	98	91.691	ENSSBOG00000029672	CRNKL1	99	91.691	Saimiri_boliviensis_boliviensis
ENSTGUG00000007645	CRNKL1	94	73.636	ENSSHAG00000011199	CRNKL1	99	73.636	Sarcophilus_harrisii
ENSTGUG00000007645	CRNKL1	95	86.747	ENSSFOG00015000946	crnkl1	89	85.131	Scleropages_formosus
ENSTGUG00000007645	CRNKL1	98	84.964	ENSSMAG00000007933	crnkl1	89	84.964	Scophthalmus_maximus
ENSTGUG00000007645	CRNKL1	98	79.589	ENSSDUG00000012625	crnkl1	87	79.589	Seriola_dumerili
ENSTGUG00000007645	CRNKL1	97	86.324	ENSSLDG00000021413	crnkl1	88	86.324	Seriola_lalandi_dorsalis
ENSTGUG00000007645	CRNKL1	99	90.831	ENSSARG00000006443	CRNKL1	82	91.837	Sorex_araneus
ENSTGUG00000007645	CRNKL1	98	91.387	ENSSPUG00000005254	CRNKL1	99	91.387	Sphenodon_punctatus
ENSTGUG00000007645	CRNKL1	96	87.425	ENSSPAG00000016150	crnkl1	86	87.425	Stegastes_partitus
ENSTGUG00000007645	CRNKL1	98	92.420	ENSSSCG00000038587	CRNKL1	99	92.420	Sus_scrofa
ENSTGUG00000007645	CRNKL1	98	78.805	ENSTRUG00000015417	crnkl1	90	80.352	Takifugu_rubripes
ENSTGUG00000007645	CRNKL1	96	85.949	ENSTNIG00000010710	crnkl1	99	84.157	Tetraodon_nigroviridis
ENSTGUG00000007645	CRNKL1	90	90.895	ENSTBEG00000001304	CRNKL1	82	90.967	Tupaia_belangeri
ENSTGUG00000007645	CRNKL1	90	88.818	ENSTTRG00000000484	CRNKL1	81	88.906	Tursiops_truncatus
ENSTGUG00000007645	CRNKL1	98	92.711	ENSUAMG00000018586	CRNKL1	99	92.711	Ursus_americanus
ENSTGUG00000007645	CRNKL1	98	92.711	ENSUMAG00000024957	CRNKL1	99	92.711	Ursus_maritimus
ENSTGUG00000007645	CRNKL1	99	89.787	ENSVVUG00000012559	CRNKL1	82	92.420	Vulpes_vulpes
ENSTGUG00000007645	CRNKL1	98	89.099	ENSXETG00000009698	crnkl1	100	88.372	Xenopus_tropicalis
ENSTGUG00000007645	CRNKL1	96	86.078	ENSXCOG00000000824	crnkl1	89	86.078	Xiphophorus_couchianus
ENSTGUG00000007645	CRNKL1	96	86.826	ENSXMAG00000006896	crnkl1	89	86.826	Xiphophorus_maculatus