EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000007733 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 38776 bases
Position: chr18:7408508-7447283
Accession: 100229361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000007965	Ago_hook	PF10427.9	1.3e-20	1	1
ENSTGUP00000007965	RRM_1	PF00076.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000008050	TNRC6C-201	5199	XM_012578545	ENSTGUP00000007965	1733 (aa)	XP_012433999	H0ZBK7

Gene Model

Click here to download ENSTGUG00000007733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000007733	TNRC6C	99	42.544	ENSTGUG00000006142	TNRC6A	90	42.575
ENSTGUG00000007733	TNRC6C	90	37.919	ENSTGUG00000010138	-	88	39.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007733	TNRC6C	100	86.082	ENSG00000078687	TNRC6C	100	90.526	Homo_sapiens
ENSTGUG00000007733	TNRC6C	78	55.261	ENSAPOG00000019749	tnrc6c1	96	51.396	Acanthochromis_polyacanthus
ENSTGUG00000007733	TNRC6C	99	84.448	ENSAMEG00000013756	TNRC6C	99	84.560	Ailuropoda_melanoleuca
ENSTGUG00000007733	TNRC6C	99	47.852	ENSACIG00000008075	tnrc6c1	95	54.022	Amphilophus_citrinellus
ENSTGUG00000007733	TNRC6C	76	68.530	ENSAOCG00000023968	tnrc6c1	97	50.454	Amphiprion_ocellaris
ENSTGUG00000007733	TNRC6C	78	54.654	ENSAPEG00000009020	tnrc6c1	97	51.135	Amphiprion_percula
ENSTGUG00000007733	TNRC6C	100	92.526	ENSAPLG00000005456	TNRC6C	93	92.526	Anas_platyrhynchos
ENSTGUG00000007733	TNRC6C	100	90.991	ENSACAG00000016198	TNRC6C	91	90.597	Anolis_carolinensis
ENSTGUG00000007733	TNRC6C	100	85.570	ENSANAG00000021554	TNRC6C	100	87.995	Aotus_nancymaae
ENSTGUG00000007733	TNRC6C	99	47.873	ENSACLG00000000424	tnrc6c1	94	53.544	Astatotilapia_calliptera
ENSTGUG00000007733	TNRC6C	100	83.212	ENSBTAG00000018658	TNRC6C	100	85.343	Bos_taurus
ENSTGUG00000007733	TNRC6C	100	85.403	ENSCJAG00000019431	TNRC6C	100	87.759	Callithrix_jacchus
ENSTGUG00000007733	TNRC6C	99	85.939	ENSCAFG00000005224	TNRC6C	92	85.996	Canis_familiaris
ENSTGUG00000007733	TNRC6C	99	87.636	ENSCAFG00020006661	TNRC6C	100	86.568	Canis_lupus_dingo
ENSTGUG00000007733	TNRC6C	100	84.359	ENSCHIG00000026004	TNRC6C	100	83.225	Capra_hircus
ENSTGUG00000007733	TNRC6C	97	86.698	ENSTSYG00000005403	TNRC6C	100	86.871	Carlito_syrichta
ENSTGUG00000007733	TNRC6C	100	80.457	ENSCAPG00000007307	TNRC6C	92	80.549	Cavia_aperea
ENSTGUG00000007733	TNRC6C	100	85.460	ENSCPOG00000000467	TNRC6C	100	85.920	Cavia_porcellus
ENSTGUG00000007733	TNRC6C	100	85.794	ENSCCAG00000030524	TNRC6C	100	88.232	Cebus_capucinus
ENSTGUG00000007733	TNRC6C	100	86.074	ENSCATG00000033135	TNRC6C	100	88.468	Cercocebus_atys
ENSTGUG00000007733	TNRC6C	100	87.184	ENSCLAG00000011139	TNRC6C	92	87.414	Chinchilla_lanigera
ENSTGUG00000007733	TNRC6C	99	86.453	ENSCSAG00000005167	TNRC6C	92	86.622	Chlorocebus_sabaeus
ENSTGUG00000007733	TNRC6C	76	89.331	ENSCHOG00000000088	TNRC6C	75	90.193	Choloepus_hoffmanni
ENSTGUG00000007733	TNRC6C	100	94.131	ENSCPBG00000027960	TNRC6C	100	94.254	Chrysemys_picta_bellii
ENSTGUG00000007733	TNRC6C	100	85.794	ENSCANG00000041771	TNRC6C	100	88.232	Colobus_angolensis_palliatus
ENSTGUG00000007733	TNRC6C	100	85.134	ENSCGRG00001022686	Tnrc6c	100	84.697	Cricetulus_griseus_chok1gshd
ENSTGUG00000007733	TNRC6C	100	85.526	ENSCGRG00000018041	Tnrc6c	100	84.697	Cricetulus_griseus_crigri
ENSTGUG00000007733	TNRC6C	99	48.230	ENSCSEG00000012744	tnrc6c1	74	54.149	Cynoglossus_semilaevis
ENSTGUG00000007733	TNRC6C	99	53.537	ENSDARG00000076847	tnrc6c1	99	54.452	Danio_rerio
ENSTGUG00000007733	TNRC6C	100	86.075	ENSDNOG00000003247	TNRC6C	94	86.300	Dasypus_novemcinctus
ENSTGUG00000007733	TNRC6C	100	81.693	ENSDORG00000004558	Tnrc6c	100	81.979	Dipodomys_ordii
ENSTGUG00000007733	TNRC6C	90	79.634	ENSETEG00000005527	TNRC6C	90	79.809	Echinops_telfairi
ENSTGUG00000007733	TNRC6C	97	87.863	ENSEASG00005004799	TNRC6C	100	87.744	Equus_asinus_asinus
ENSTGUG00000007733	TNRC6C	100	87.924	ENSECAG00000012486	TNRC6C	92	87.809	Equus_caballus
ENSTGUG00000007733	TNRC6C	96	87.648	ENSEEUG00000010008	TNRC6C	96	87.479	Erinaceus_europaeus
ENSTGUG00000007733	TNRC6C	100	83.678	ENSFCAG00000028358	TNRC6C	100	86.288	Felis_catus
ENSTGUG00000007733	TNRC6C	97	94.881	ENSFALG00000000848	TNRC6C	100	94.881	Ficedula_albicollis
ENSTGUG00000007733	TNRC6C	100	87.011	ENSFDAG00000010368	TNRC6C	100	87.471	Fukomys_damarensis
ENSTGUG00000007733	TNRC6C	99	49.116	ENSFHEG00000002936	tnrc6c1	90	48.907	Fundulus_heteroclitus
ENSTGUG00000007733	TNRC6C	100	95.096	ENSGALG00000001725	TNRC6C	100	97.151	Gallus_gallus
ENSTGUG00000007733	TNRC6C	99	49.973	ENSGAFG00000019019	tnrc6c1	83	55.256	Gambusia_affinis
ENSTGUG00000007733	TNRC6C	75	55.051	ENSGACG00000012320	tnrc6c1	71	55.263	Gasterosteus_aculeatus
ENSTGUG00000007733	TNRC6C	100	93.675	ENSGAGG00000022043	TNRC6C	98	93.617	Gopherus_agassizii
ENSTGUG00000007733	TNRC6C	100	85.523	ENSGGOG00000011304	TNRC6C	100	87.766	Gorilla_gorilla
ENSTGUG00000007733	TNRC6C	99	48.459	ENSHBUG00000010846	tnrc6c1	95	53.889	Haplochromis_burtoni
ENSTGUG00000007733	TNRC6C	100	86.897	ENSHGLG00000004809	TNRC6C	92	87.184	Heterocephalus_glaber_female
ENSTGUG00000007733	TNRC6C	100	86.327	ENSHGLG00100012597	TNRC6C	92	86.613	Heterocephalus_glaber_male
ENSTGUG00000007733	TNRC6C	99	53.156	ENSIPUG00000000818	tnrc6c1	92	53.649	Ictalurus_punctatus
ENSTGUG00000007733	TNRC6C	100	86.395	ENSSTOG00000009101	TNRC6C	100	86.854	Ictidomys_tridecemlineatus
ENSTGUG00000007733	TNRC6C	100	84.277	ENSJJAG00000017055	Tnrc6c	91	84.105	Jaculus_jaculus
ENSTGUG00000007733	TNRC6C	99	48.526	ENSKMAG00000021023	tnrc6c1	97	51.634	Kryptolebias_marmoratus
ENSTGUG00000007733	TNRC6C	100	79.233	ENSLACG00000015283	TNRC6C	100	79.062	Latimeria_chalumnae
ENSTGUG00000007733	TNRC6C	100	57.878	ENSLOCG00000013377	tnrc6c1	92	58.499	Lepisosteus_oculatus
ENSTGUG00000007733	TNRC6C	100	87.787	ENSLAFG00000011122	TNRC6C	93	87.557	Loxodonta_africana
ENSTGUG00000007733	TNRC6C	100	86.130	ENSMFAG00000043943	TNRC6C	100	88.527	Macaca_fascicularis
ENSTGUG00000007733	TNRC6C	100	86.517	ENSMMUG00000011924	TNRC6C	100	88.527	Macaca_mulatta
ENSTGUG00000007733	TNRC6C	100	86.130	ENSMNEG00000030405	TNRC6C	100	88.527	Macaca_nemestrina
ENSTGUG00000007733	TNRC6C	100	86.130	ENSMLEG00000033436	TNRC6C	100	88.527	Mandrillus_leucophaeus
ENSTGUG00000007733	TNRC6C	92	53.537	ENSMAMG00000023613	tnrc6c1	100	50.306	Mastacembelus_armatus
ENSTGUG00000007733	TNRC6C	99	48.240	ENSMZEG00005010920	tnrc6c1	94	53.544	Maylandia_zebra
ENSTGUG00000007733	TNRC6C	100	86.611	ENSMGAG00000003906	TNRC6C	93	86.443	Meleagris_gallopavo
ENSTGUG00000007733	TNRC6C	97	85.462	ENSMAUG00000021618	Tnrc6c	100	85.580	Mesocricetus_auratus
ENSTGUG00000007733	TNRC6C	100	86.626	ENSMICG00000003952	TNRC6C	100	88.698	Microcebus_murinus
ENSTGUG00000007733	TNRC6C	100	87.134	ENSMOCG00000015879	Tnrc6c	100	87.249	Microtus_ochrogaster
ENSTGUG00000007733	TNRC6C	75	56.414	ENSMMOG00000005203	tnrc6c1	97	51.361	Mola_mola
ENSTGUG00000007733	TNRC6C	100	88.692	ENSMODG00000001785	TNRC6C	92	87.950	Monodelphis_domestica
ENSTGUG00000007733	TNRC6C	100	86.674	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	86.789	Mus_caroli
ENSTGUG00000007733	TNRC6C	100	86.330	ENSMUSG00000025571	Tnrc6c	100	86.445	Mus_musculus
ENSTGUG00000007733	TNRC6C	100	86.674	MGP_PahariEiJ_G0018593	Tnrc6c	100	86.789	Mus_pahari
ENSTGUG00000007733	TNRC6C	100	86.387	MGP_SPRETEiJ_G0018309	Tnrc6c	100	86.502	Mus_spretus
ENSTGUG00000007733	TNRC6C	99	83.671	ENSMPUG00000013348	TNRC6C	91	83.446	Mustela_putorius_furo
ENSTGUG00000007733	TNRC6C	100	78.651	ENSMLUG00000014431	TNRC6C	91	79.185	Myotis_lucifugus
ENSTGUG00000007733	TNRC6C	100	85.812	ENSNGAG00000012203	Tnrc6c	92	85.812	Nannospalax_galili
ENSTGUG00000007733	TNRC6C	99	48.599	ENSNBRG00000005344	tnrc6c1	95	53.665	Neolamprologus_brichardi
ENSTGUG00000007733	TNRC6C	99	83.772	ENSNLEG00000000047	TNRC6C	92	83.772	Nomascus_leucogenys
ENSTGUG00000007733	TNRC6C	98	83.294	ENSMEUG00000005104	TNRC6C	100	83.353	Notamacropus_eugenii
ENSTGUG00000007733	TNRC6C	97	87.160	ENSODEG00000012499	TNRC6C	100	87.692	Octodon_degus
ENSTGUG00000007733	TNRC6C	91	51.922	ENSONIG00000002210	tnrc6c1	96	57.133	Oreochromis_niloticus
ENSTGUG00000007733	TNRC6C	100	89.362	ENSOANG00000009758	-	92	89.362	Ornithorhynchus_anatinus
ENSTGUG00000007733	TNRC6C	99	48.300	ENSORLG00000009837	tnrc6c1	100	68.401	Oryzias_latipes
ENSTGUG00000007733	TNRC6C	99	47.121	ENSORLG00020016510	tnrc6c1	83	53.509	Oryzias_latipes_hni
ENSTGUG00000007733	TNRC6C	81	43.342	ENSORLG00015000171	tnrc6c1	76	48.387	Oryzias_latipes_hsok
ENSTGUG00000007733	TNRC6C	99	48.838	ENSOMEG00000000357	tnrc6c1	97	49.461	Oryzias_melastigma
ENSTGUG00000007733	TNRC6C	97	84.731	ENSOGAG00000007197	TNRC6C	100	84.962	Otolemur_garnettii
ENSTGUG00000007733	TNRC6C	96	79.636	ENSOARG00000006041	TNRC6C	91	79.085	Ovis_aries
ENSTGUG00000007733	TNRC6C	100	85.962	ENSPPAG00000027160	TNRC6C	100	88.291	Pan_paniscus
ENSTGUG00000007733	TNRC6C	100	83.622	ENSPPRG00000018881	TNRC6C	100	86.229	Panthera_pardus
ENSTGUG00000007733	TNRC6C	91	86.022	ENSPTIG00000008791	TNRC6C	69	72.361	Panthera_tigris_altaica
ENSTGUG00000007733	TNRC6C	100	85.962	ENSPTRG00000009699	TNRC6C	100	88.291	Pan_troglodytes
ENSTGUG00000007733	TNRC6C	100	86.130	ENSPANG00000019994	TNRC6C	100	88.409	Papio_anubis
ENSTGUG00000007733	TNRC6C	94	51.871	ENSPKIG00000005428	tnrc6c1	100	51.195	Paramormyrops_kingsleyae
ENSTGUG00000007733	TNRC6C	100	91.935	ENSPSIG00000018069	TNRC6C	100	91.878	Pelodiscus_sinensis
ENSTGUG00000007733	TNRC6C	85	55.269	ENSPMGG00000022911	tnrc6c1	97	63.563	Periophthalmus_magnuspinnatus
ENSTGUG00000007733	TNRC6C	100	86.049	ENSPEMG00000009785	Tnrc6c	100	84.226	Peromyscus_maniculatus_bairdii
ENSTGUG00000007733	TNRC6C	56	86.359	ENSPCIG00000017421	-	99	86.462	Phascolarctos_cinereus
ENSTGUG00000007733	TNRC6C	99	49.517	ENSPFOG00000012560	tnrc6c1	96	56.131	Poecilia_formosa
ENSTGUG00000007733	TNRC6C	94	50.657	ENSPLAG00000021055	tnrc6c1	97	51.140	Poecilia_latipinna
ENSTGUG00000007733	TNRC6C	100	86.517	ENSPPYG00000008679	TNRC6C	91	86.685	Pongo_abelii
ENSTGUG00000007733	TNRC6C	93	91.469	ENSPCAG00000012510	TNRC6C	94	91.469	Procavia_capensis
ENSTGUG00000007733	TNRC6C	97	88.823	ENSPCOG00000021451	TNRC6C	100	88.941	Propithecus_coquereli
ENSTGUG00000007733	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSTGUG00000007733	TNRC6C	99	47.437	ENSPNYG00000014477	tnrc6c1	95	53.103	Pundamilia_nyererei
ENSTGUG00000007733	TNRC6C	97	86.111	ENSRNOG00000022395	Tnrc6c	100	86.111	Rattus_norvegicus
ENSTGUG00000007733	TNRC6C	100	86.130	ENSRBIG00000027777	TNRC6C	100	88.587	Rhinopithecus_bieti
ENSTGUG00000007733	TNRC6C	100	86.186	ENSRROG00000042912	TNRC6C	100	88.646	Rhinopithecus_roxellana
ENSTGUG00000007733	TNRC6C	100	85.690	ENSSBOG00000023981	TNRC6C	100	85.665	Saimiri_boliviensis_boliviensis
ENSTGUG00000007733	TNRC6C	51	89.405	ENSSHAG00000018330	-	100	88.649	Sarcophilus_harrisii
ENSTGUG00000007733	TNRC6C	75	60.143	ENSSFOG00015006475	tnrc6c1	94	53.127	Scleropages_formosus
ENSTGUG00000007733	TNRC6C	72	56.257	ENSSFOG00015004735	-	99	61.880	Scleropages_formosus
ENSTGUG00000007733	TNRC6C	99	48.733	ENSSMAG00000012761	tnrc6c1	99	51.242	Scophthalmus_maximus
ENSTGUG00000007733	TNRC6C	99	50.414	ENSSDUG00000002366	tnrc6c1	96	51.488	Seriola_dumerili
ENSTGUG00000007733	TNRC6C	91	50.472	ENSSLDG00000025613	tnrc6c1	97	50.796	Seriola_lalandi_dorsalis
ENSTGUG00000007733	TNRC6C	91	90.756	ENSSARG00000006816	TNRC6C	91	90.756	Sorex_araneus
ENSTGUG00000007733	TNRC6C	80	90.056	ENSSPUG00000007341	TNRC6C	91	89.917	Sphenodon_punctatus
ENSTGUG00000007733	TNRC6C	76	54.161	ENSSPAG00000014977	tnrc6c1	96	49.704	Stegastes_partitus
ENSTGUG00000007733	TNRC6C	94	85.383	ENSSSCG00000034373	TNRC6C	100	84.878	Sus_scrofa
ENSTGUG00000007733	TNRC6C	76	53.539	ENSTRUG00000011685	tnrc6c1	100	48.592	Takifugu_rubripes
ENSTGUG00000007733	TNRC6C	95	55.580	ENSTNIG00000005273	tnrc6c1	100	60.235	Tetraodon_nigroviridis
ENSTGUG00000007733	TNRC6C	62	88.281	ENSTBEG00000005046	TNRC6C	95	88.281	Tupaia_belangeri
ENSTGUG00000007733	TNRC6C	100	87.241	ENSTTRG00000010828	TNRC6C	99	87.011	Tursiops_truncatus
ENSTGUG00000007733	TNRC6C	99	85.592	ENSUMAG00000013614	TNRC6C	92	85.535	Ursus_maritimus
ENSTGUG00000007733	TNRC6C	50	77.943	ENSVPAG00000006765	-	99	77.816	Vicugna_pacos
ENSTGUG00000007733	TNRC6C	97	87.988	ENSVVUG00000015268	TNRC6C	100	87.751	Vulpes_vulpes
ENSTGUG00000007733	TNRC6C	97	77.706	ENSXETG00000019470	tnrc6c	100	77.340	Xenopus_tropicalis
ENSTGUG00000007733	TNRC6C	99	50.809	ENSXMAG00000025971	tnrc6c1	83	55.256	Xiphophorus_maculatus