EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000007942 (Gene tree)
Gene ID: 100190598
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 5220 bases
Position: chr7:14468526-14473745
Accession: 100190598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000008231	RRM_1	PF00076.22	5.3e-14	1	1
ENSTGUP00000008231	RRM_3	PF08777.11	3.9e-26	1	1
ENSTGUP00000008231	La	PF05383.17	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000008317	-	1224	-	ENSTGUP00000008231	407 (aa)	-	B5KFT4

Gene Model

Click here to download ENSTGUG00000007942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000007942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000007942	SSB	100	74.572	ENSG00000138385	SSB	100	78.333	Homo_sapiens
ENSTGUG00000007942	SSB	90	58.021	ENSAPOG00000003448	ssb	96	57.754	Acanthochromis_polyacanthus
ENSTGUG00000007942	SSB	100	72.406	ENSAMEG00000010507	SSB	100	70.213	Ailuropoda_melanoleuca
ENSTGUG00000007942	SSB	93	57.256	ENSACIG00000001738	ssb	99	57.520	Amphilophus_citrinellus
ENSTGUG00000007942	SSB	90	58.021	ENSAOCG00000020398	ssb	96	58.289	Amphiprion_ocellaris
ENSTGUG00000007942	SSB	99	55.012	ENSAPEG00000020395	ssb	96	58.556	Amphiprion_percula
ENSTGUG00000007942	SSB	99	57.457	ENSATEG00000016884	ssb	95	57.990	Anabas_testudineus
ENSTGUG00000007942	SSB	100	88.263	ENSAPLG00000006109	SSB	100	86.150	Anas_platyrhynchos
ENSTGUG00000007942	SSB	100	68.856	ENSACAG00000017008	SSB	99	69.118	Anolis_carolinensis
ENSTGUG00000007942	SSB	100	66.830	ENSANAG00000027195	-	100	66.830	Aotus_nancymaae
ENSTGUG00000007942	SSB	99	53.827	ENSACLG00000010798	ssb	99	53.333	Astatotilapia_calliptera
ENSTGUG00000007942	SSB	99	55.825	ENSAMXG00000012606	ssb	94	56.923	Astyanax_mexicanus
ENSTGUG00000007942	SSB	100	75.550	ENSBTAG00000008716	SSB	100	74.817	Bos_taurus
ENSTGUG00000007942	SSB	73	37.171	WBGene00016653	C44E4.4	76	38.079	Caenorhabditis_elegans
ENSTGUG00000007942	SSB	100	74.572	ENSCJAG00000045073	SSB	100	74.572	Callithrix_jacchus
ENSTGUG00000007942	SSB	100	75.122	ENSCAFG00000012418	SSB	100	74.878	Canis_familiaris
ENSTGUG00000007942	SSB	100	75.122	ENSCAFG00020002900	SSB	100	74.878	Canis_lupus_dingo
ENSTGUG00000007942	SSB	100	75.061	ENSCHIG00000022624	-	100	75.061	Capra_hircus
ENSTGUG00000007942	SSB	100	70.803	ENSCHIG00000022196	-	100	70.803	Capra_hircus
ENSTGUG00000007942	SSB	100	74.572	ENSTSYG00000000097	SSB	100	74.572	Carlito_syrichta
ENSTGUG00000007942	SSB	100	77.017	ENSCPOG00000003338	SSB	100	77.017	Cavia_porcellus
ENSTGUG00000007942	SSB	100	74.817	ENSCCAG00000035147	SSB	100	74.817	Cebus_capucinus
ENSTGUG00000007942	SSB	100	55.501	ENSCATG00000042909	-	100	54.768	Cercocebus_atys
ENSTGUG00000007942	SSB	78	67.771	ENSCATG00000036701	SSB	93	67.771	Cercocebus_atys
ENSTGUG00000007942	SSB	100	75.795	ENSCLAG00000015617	-	100	75.795	Chinchilla_lanigera
ENSTGUG00000007942	SSB	98	68.579	ENSCSAG00000018390	-	93	68.649	Chlorocebus_sabaeus
ENSTGUG00000007942	SSB	100	74.572	ENSCSAG00000015200	SSB	89	74.572	Chlorocebus_sabaeus
ENSTGUG00000007942	SSB	100	74.817	ENSCHOG00000007763	SSB	100	74.817	Choloepus_hoffmanni
ENSTGUG00000007942	SSB	100	85.819	ENSCPBG00000006519	SSB	100	85.819	Chrysemys_picta_bellii
ENSTGUG00000007942	SSB	100	74.572	ENSCANG00000027695	SSB	100	74.572	Colobus_angolensis_palliatus
ENSTGUG00000007942	SSB	98	58.750	ENSCANG00000028838	-	91	59.326	Colobus_angolensis_palliatus
ENSTGUG00000007942	SSB	99	65.185	ENSCANG00000033240	-	99	63.457	Colobus_angolensis_palliatus
ENSTGUG00000007942	SSB	99	64.390	ENSCGRG00001024831	Ssb	92	67.647	Cricetulus_griseus_chok1gshd
ENSTGUG00000007942	SSB	99	64.390	ENSCGRG00000005387	Ssb	92	67.647	Cricetulus_griseus_crigri
ENSTGUG00000007942	SSB	97	55.224	ENSCSEG00000011599	ssb	94	56.283	Cynoglossus_semilaevis
ENSTGUG00000007942	SSB	99	57.561	ENSCVAG00000021558	ssb	95	57.841	Cyprinodon_variegatus
ENSTGUG00000007942	SSB	99	58.191	ENSDARG00000029252	ssb	99	57.457	Danio_rerio
ENSTGUG00000007942	SSB	100	75.550	ENSDNOG00000013450	SSB	100	75.550	Dasypus_novemcinctus
ENSTGUG00000007942	SSB	100	68.434	ENSDORG00000005543	Ssb	100	66.265	Dipodomys_ordii
ENSTGUG00000007942	SSB	81	34.111	FBgn0011638	La	79	34.441	Drosophila_melanogaster
ENSTGUG00000007942	SSB	88	48.493	ENSEBUG00000001237	ssb	94	47.123	Eptatretus_burgeri
ENSTGUG00000007942	SSB	100	75.795	ENSEASG00005022835	SSB	100	75.795	Equus_asinus_asinus
ENSTGUG00000007942	SSB	100	75.550	ENSECAG00000018495	SSB	100	75.550	Equus_caballus
ENSTGUG00000007942	SSB	75	61.438	ENSEEUG00000008077	SSB	78	61.438	Erinaceus_europaeus
ENSTGUG00000007942	SSB	99	62.500	ENSELUG00000020929	ssb	99	60.784	Esox_lucius
ENSTGUG00000007942	SSB	100	74.390	ENSFCAG00000011601	SSB	100	74.146	Felis_catus
ENSTGUG00000007942	SSB	100	97.543	ENSFALG00000000930	SSB	100	97.543	Ficedula_albicollis
ENSTGUG00000007942	SSB	100	75.550	ENSFDAG00000000598	SSB	100	75.550	Fukomys_damarensis
ENSTGUG00000007942	SSB	72	49.324	ENSFHEG00000003268	ssb	95	54.221	Fundulus_heteroclitus
ENSTGUG00000007942	SSB	97	55.882	ENSGMOG00000002664	ssb	99	53.941	Gadus_morhua
ENSTGUG00000007942	SSB	100	94.103	ENSGALG00000009677	SSB	100	93.366	Gallus_gallus
ENSTGUG00000007942	SSB	99	55.257	ENSGAFG00000002749	ssb	95	55.670	Gambusia_affinis
ENSTGUG00000007942	SSB	97	55.746	ENSGACG00000005107	ssb	94	55.297	Gasterosteus_aculeatus
ENSTGUG00000007942	SSB	100	85.330	ENSGAGG00000007807	SSB	100	85.330	Gopherus_agassizii
ENSTGUG00000007942	SSB	55	71.681	ENSGGOG00000023471	-	92	71.681	Gorilla_gorilla
ENSTGUG00000007942	SSB	100	61.369	ENSGGOG00000024891	-	100	59.413	Gorilla_gorilla
ENSTGUG00000007942	SSB	99	53.827	ENSHBUG00000006584	ssb	99	53.333	Haplochromis_burtoni
ENSTGUG00000007942	SSB	100	69.024	ENSHGLG00000004478	-	100	67.237	Heterocephalus_glaber_female
ENSTGUG00000007942	SSB	100	67.237	ENSHGLG00000005832	-	100	67.237	Heterocephalus_glaber_female
ENSTGUG00000007942	SSB	100	74.279	ENSHGLG00000017580	-	100	71.875	Heterocephalus_glaber_female
ENSTGUG00000007942	SSB	100	74.279	ENSHGLG00100003084	-	100	71.875	Heterocephalus_glaber_male
ENSTGUG00000007942	SSB	100	66.176	ENSHGLG00100008767	-	100	64.251	Heterocephalus_glaber_male
ENSTGUG00000007942	SSB	97	54.135	ENSHCOG00000019011	ssb	95	55.556	Hippocampus_comes
ENSTGUG00000007942	SSB	97	59.204	ENSIPUG00000003681	SSB	92	60.582	Ictalurus_punctatus
ENSTGUG00000007942	SSB	100	75.000	ENSSTOG00000008416	SSB	100	75.000	Ictidomys_tridecemlineatus
ENSTGUG00000007942	SSB	99	64.539	ENSJJAG00000023158	-	99	62.175	Jaculus_jaculus
ENSTGUG00000007942	SSB	99	53.580	ENSJJAG00000016250	-	99	53.580	Jaculus_jaculus
ENSTGUG00000007942	SSB	99	55.990	ENSKMAG00000017317	ssb	94	56.693	Kryptolebias_marmoratus
ENSTGUG00000007942	SSB	99	55.257	ENSLBEG00000017345	ssb	95	56.443	Labrus_bergylta
ENSTGUG00000007942	SSB	99	69.118	ENSLACG00000014056	SSB	99	67.892	Latimeria_chalumnae
ENSTGUG00000007942	SSB	97	67.500	ENSLOCG00000007933	ssb	98	67.750	Lepisosteus_oculatus
ENSTGUG00000007942	SSB	74	58.609	ENSLAFG00000026721	-	99	58.609	Loxodonta_africana
ENSTGUG00000007942	SSB	100	62.990	ENSLAFG00000028909	-	100	61.425	Loxodonta_africana
ENSTGUG00000007942	SSB	100	69.647	ENSLAFG00000000867	-	100	68.235	Loxodonta_africana
ENSTGUG00000007942	SSB	100	74.572	ENSMFAG00000039066	SSB	100	74.572	Macaca_fascicularis
ENSTGUG00000007942	SSB	87	65.546	ENSMFAG00000041478	-	91	66.564	Macaca_fascicularis
ENSTGUG00000007942	SSB	99	51.351	ENSMMUG00000039889	-	100	51.106	Macaca_mulatta
ENSTGUG00000007942	SSB	100	74.572	ENSMMUG00000023051	SSB	100	74.572	Macaca_mulatta
ENSTGUG00000007942	SSB	100	63.971	ENSMMUG00000011724	-	97	61.916	Macaca_mulatta
ENSTGUG00000007942	SSB	87	65.546	ENSMNEG00000034698	-	91	66.564	Macaca_nemestrina
ENSTGUG00000007942	SSB	100	64.146	ENSMNEG00000028321	SSB	100	64.477	Macaca_nemestrina
ENSTGUG00000007942	SSB	100	74.572	ENSMLEG00000035717	SSB	100	74.572	Mandrillus_leucophaeus
ENSTGUG00000007942	SSB	100	53.676	ENSMLEG00000042644	-	90	53.533	Mandrillus_leucophaeus
ENSTGUG00000007942	SSB	99	56.724	ENSMAMG00000004800	ssb	95	57.732	Mastacembelus_armatus
ENSTGUG00000007942	SSB	99	53.827	ENSMZEG00005005749	ssb	99	53.333	Maylandia_zebra
ENSTGUG00000007942	SSB	100	93.612	ENSMGAG00000010328	SSB	100	95.631	Meleagris_gallopavo
ENSTGUG00000007942	SSB	99	75.430	ENSMICG00000028252	-	99	75.430	Microcebus_murinus
ENSTGUG00000007942	SSB	98	69.077	ENSMICG00000033304	-	93	73.901	Microcebus_murinus
ENSTGUG00000007942	SSB	85	76.730	ENSMODG00000019271	-	99	76.730	Monodelphis_domestica
ENSTGUG00000007942	SSB	100	71.599	ENSMODG00000008227	-	100	68.974	Monodelphis_domestica
ENSTGUG00000007942	SSB	100	57.213	ENSMODG00000007027	-	100	57.213	Monodelphis_domestica
ENSTGUG00000007942	SSB	89	54.400	ENSMALG00000008045	ssb	92	56.842	Monopterus_albus
ENSTGUG00000007942	SSB	99	65.321	MGP_CAROLIEiJ_G0023629	-	100	75.543	Mus_caroli
ENSTGUG00000007942	SSB	99	64.608	ENSMUSG00000068882	Ssb	100	75.543	Mus_musculus
ENSTGUG00000007942	SSB	99	64.286	MGP_PahariEiJ_G0025081	-	100	75.000	Mus_pahari
ENSTGUG00000007942	SSB	99	64.608	MGP_SPRETEiJ_G0024551	Ssb	100	75.543	Mus_spretus
ENSTGUG00000007942	SSB	100	75.550	ENSMPUG00000000785	SSB	100	75.550	Mustela_putorius_furo
ENSTGUG00000007942	SSB	100	72.406	ENSMLUG00000016316	SSB	100	69.811	Myotis_lucifugus
ENSTGUG00000007942	SSB	99	54.321	ENSNBRG00000012661	ssb	97	53.639	Neolamprologus_brichardi
ENSTGUG00000007942	SSB	88	59.280	ENSNLEG00000028754	-	100	53.790	Nomascus_leucogenys
ENSTGUG00000007942	SSB	100	74.572	ENSNLEG00000004958	SSB	100	74.572	Nomascus_leucogenys
ENSTGUG00000007942	SSB	61	80.645	ENSMEUG00000001650	-	100	80.645	Notamacropus_eugenii
ENSTGUG00000007942	SSB	72	57.534	ENSOPRG00000008475	-	100	57.192	Ochotona_princeps
ENSTGUG00000007942	SSB	93	72.105	ENSODEG00000004202	-	99	70.789	Octodon_degus
ENSTGUG00000007942	SSB	99	54.568	ENSONIG00000008776	ssb	92	56.640	Oreochromis_niloticus
ENSTGUG00000007942	SSB	99	76.049	ENSOANG00000008543	SSB	99	76.049	Ornithorhynchus_anatinus
ENSTGUG00000007942	SSB	100	74.083	ENSOCUG00000010396	SSB	100	74.572	Oryctolagus_cuniculus
ENSTGUG00000007942	SSB	99	56.724	ENSORLG00000017208	ssb	95	57.069	Oryzias_latipes
ENSTGUG00000007942	SSB	99	56.724	ENSORLG00020022574	ssb	95	57.069	Oryzias_latipes_hni
ENSTGUG00000007942	SSB	99	56.479	ENSORLG00015016592	ssb	95	56.812	Oryzias_latipes_hsok
ENSTGUG00000007942	SSB	99	57.843	ENSOMEG00000003193	ssb	95	58.763	Oryzias_melastigma
ENSTGUG00000007942	SSB	100	70.892	ENSOGAG00000029768	SSB	100	68.779	Otolemur_garnettii
ENSTGUG00000007942	SSB	100	75.306	ENSOARG00000002906	SSB	100	75.306	Ovis_aries
ENSTGUG00000007942	SSB	100	60.636	ENSPPAG00000032427	-	100	68.217	Pan_paniscus
ENSTGUG00000007942	SSB	100	74.572	ENSPPAG00000042673	SSB	100	74.572	Pan_paniscus
ENSTGUG00000007942	SSB	88	61.773	ENSPPAG00000006189	-	92	58.611	Pan_paniscus
ENSTGUG00000007942	SSB	100	74.390	ENSPPRG00000006599	SSB	100	74.146	Panthera_pardus
ENSTGUG00000007942	SSB	100	74.390	ENSPTIG00000011021	SSB	97	74.146	Panthera_tigris_altaica
ENSTGUG00000007942	SSB	100	74.572	ENSPTRG00000012620	SSB	100	74.572	Pan_troglodytes
ENSTGUG00000007942	SSB	100	58.191	ENSPTRG00000042880	-	100	56.098	Pan_troglodytes
ENSTGUG00000007942	SSB	100	53.922	ENSPANG00000034126	-	78	57.975	Papio_anubis
ENSTGUG00000007942	SSB	97	54.937	ENSPANG00000031877	-	87	53.804	Papio_anubis
ENSTGUG00000007942	SSB	100	74.572	ENSPANG00000007440	SSB	100	74.572	Papio_anubis
ENSTGUG00000007942	SSB	99	63.260	ENSPKIG00000019325	ssb	100	63.504	Paramormyrops_kingsleyae
ENSTGUG00000007942	SSB	100	83.374	ENSPSIG00000002265	SSB	93	83.374	Pelodiscus_sinensis
ENSTGUG00000007942	SSB	86	52.394	ENSPMGG00000020075	ssb	92	53.239	Periophthalmus_magnuspinnatus
ENSTGUG00000007942	SSB	99	47.786	ENSPMAG00000002982	ssb	88	49.474	Petromyzon_marinus
ENSTGUG00000007942	SSB	100	73.171	ENSPCIG00000028591	-	100	73.659	Phascolarctos_cinereus
ENSTGUG00000007942	SSB	99	56.479	ENSPFOG00000009650	ssb	93	57.754	Poecilia_formosa
ENSTGUG00000007942	SSB	99	55.990	ENSPLAG00000020498	ssb	93	57.754	Poecilia_latipinna
ENSTGUG00000007942	SSB	99	56.235	ENSPMEG00000001051	ssb	93	57.487	Poecilia_mexicana
ENSTGUG00000007942	SSB	91	57.520	ENSPREG00000003708	ssb	98	57.256	Poecilia_reticulata
ENSTGUG00000007942	SSB	100	74.572	ENSPPYG00000012919	SSB	100	74.572	Pongo_abelii
ENSTGUG00000007942	SSB	95	72.351	ENSPCAG00000010276	SSB	100	72.351	Procavia_capensis
ENSTGUG00000007942	SSB	100	71.883	ENSPCOG00000015741	-	100	70.905	Propithecus_coquereli
ENSTGUG00000007942	SSB	100	66.015	ENSPCOG00000023189	-	100	66.015	Propithecus_coquereli
ENSTGUG00000007942	SSB	86	77.714	ENSPVAG00000006615	SSB	99	77.714	Pteropus_vampyrus
ENSTGUG00000007942	SSB	99	53.827	ENSPNYG00000006444	ssb	99	53.333	Pundamilia_nyererei
ENSTGUG00000007942	SSB	99	56.724	ENSPNAG00000011708	ssb	94	57.106	Pygocentrus_nattereri
ENSTGUG00000007942	SSB	99	64.133	ENSRNOG00000007998	Ssb	93	65.195	Rattus_norvegicus
ENSTGUG00000007942	SSB	99	64.706	ENSRNOG00000011606	AABR07061825.1	92	67.473	Rattus_norvegicus
ENSTGUG00000007942	SSB	93	64.116	ENSRBIG00000041232	-	97	62.269	Rhinopithecus_bieti
ENSTGUG00000007942	SSB	100	61.111	ENSRBIG00000041972	SSB	88	76.522	Rhinopithecus_bieti
ENSTGUG00000007942	SSB	100	52.812	ENSRBIG00000029918	-	100	55.854	Rhinopithecus_bieti
ENSTGUG00000007942	SSB	89	69.041	ENSRBIG00000041608	-	98	66.484	Rhinopithecus_bieti
ENSTGUG00000007942	SSB	100	61.463	ENSRROG00000007149	-	100	61.463	Rhinopithecus_roxellana
ENSTGUG00000007942	SSB	89	71.585	ENSRROG00000034102	-	97	67.750	Rhinopithecus_roxellana
ENSTGUG00000007942	SSB	97	64.899	ENSRROG00000031684	-	99	63.131	Rhinopithecus_roxellana
ENSTGUG00000007942	SSB	100	74.572	ENSRROG00000040346	SSB	100	74.572	Rhinopithecus_roxellana
ENSTGUG00000007942	SSB	100	74.817	ENSSBOG00000027204	SSB	100	74.817	Saimiri_boliviensis_boliviensis
ENSTGUG00000007942	SSB	100	73.415	ENSSHAG00000018062	SSB	100	73.902	Sarcophilus_harrisii
ENSTGUG00000007942	SSB	99	62.439	ENSSFOG00015000550	ssb	99	62.439	Scleropages_formosus
ENSTGUG00000007942	SSB	97	53.671	ENSSMAG00000013885	ssb	99	57.181	Scophthalmus_maximus
ENSTGUG00000007942	SSB	99	57.457	ENSSDUG00000020117	ssb	95	58.247	Seriola_dumerili
ENSTGUG00000007942	SSB	99	55.172	ENSSLDG00000002525	ssb	95	55.325	Seriola_lalandi_dorsalis
ENSTGUG00000007942	SSB	95	67.876	ENSSARG00000007747	SSB	100	67.876	Sorex_araneus
ENSTGUG00000007942	SSB	100	77.451	ENSSPUG00000012112	SSB	100	80.392	Sphenodon_punctatus
ENSTGUG00000007942	SSB	99	54.523	ENSSPAG00000005696	ssb	97	57.713	Stegastes_partitus
ENSTGUG00000007942	SSB	90	68.835	ENSSSCG00000015938	SSB	92	68.022	Sus_scrofa
ENSTGUG00000007942	SSB	99	56.511	ENSTRUG00000017839	ssb	95	56.995	Takifugu_rubripes
ENSTGUG00000007942	SSB	89	59.563	ENSTNIG00000000915	ssb	100	58.919	Tetraodon_nigroviridis
ENSTGUG00000007942	SSB	82	76.522	ENSTBEG00000009056	SSB	82	76.522	Tupaia_belangeri
ENSTGUG00000007942	SSB	100	74.878	ENSTTRG00000002152	SSB	100	74.390	Tursiops_truncatus
ENSTGUG00000007942	SSB	91	77.748	ENSUAMG00000027833	SSB	98	77.748	Ursus_americanus
ENSTGUG00000007942	SSB	100	75.366	ENSUMAG00000013907	SSB	100	74.572	Ursus_maritimus
ENSTGUG00000007942	SSB	100	75.061	ENSVPAG00000007183	SSB	100	75.061	Vicugna_pacos
ENSTGUG00000007942	SSB	100	75.122	ENSVVUG00000016573	SSB	78	74.634	Vulpes_vulpes
ENSTGUG00000007942	SSB	99	60.329	ENSXETG00000025402	ssb	99	58.588	Xenopus_tropicalis
ENSTGUG00000007942	SSB	90	55.764	ENSXCOG00000019109	ssb	93	62.500	Xiphophorus_couchianus
ENSTGUG00000007942	SSB	99	56.479	ENSXMAG00000004888	ssb	95	56.443	Xiphophorus_maculatus