EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000008233 (Gene tree)
Gene ID: -
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 16996 bases
Position: chr8:18728050-18745045
Accession: 9826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000008504	ResIII	PF04851.15	1.4e-08	1	1
ENSTGUP00000008504	DEAD	PF00270.29	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000008595	RAD54L-201	2235	-	ENSTGUP00000008504	744 (aa)	-	H0ZD43

Gene Model

Click here to download ENSTGUG00000008233's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000008233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000008233	RAD54L	67	33.624	ENSTGUG00000007157	HELLS	53	36.500
ENSTGUG00000008233	RAD54L	63	32.495	ENSTGUG00000015488	-	53	32.983
ENSTGUG00000008233	RAD54L	68	30.389	ENSTGUG00000000524	ERCC6L2	80	30.212
ENSTGUG00000008233	RAD54L	68	32.485	ENSTGUG00000013392	-	53	32.290
ENSTGUG00000008233	RAD54L	81	44.960	ENSTGUG00000011880	-	66	45.032
ENSTGUG00000008233	RAD54L	62	31.337	ENSTGUG00000004992	ERCC6L	87	30.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000008233	RAD54L	99	83.936	ENSG00000085999	RAD54L	100	92.000	Homo_sapiens
ENSTGUG00000008233	RAD54L	99	77.957	ENSAPOG00000011643	rad54l	99	77.658	Acanthochromis_polyacanthus
ENSTGUG00000008233	RAD54L	99	83.845	ENSAMEG00000013902	RAD54L	99	83.668	Ailuropoda_melanoleuca
ENSTGUG00000008233	RAD54L	99	79.812	ENSACIG00000001939	rad54l	99	79.408	Amphilophus_citrinellus
ENSTGUG00000008233	RAD54L	99	81.511	ENSAOCG00000017576	rad54l	99	81.216	Amphiprion_ocellaris
ENSTGUG00000008233	RAD54L	96	82.419	ENSAPEG00000020658	rad54l	98	82.419	Amphiprion_percula
ENSTGUG00000008233	RAD54L	94	83.548	ENSATEG00000006767	rad54l	99	83.548	Anabas_testudineus
ENSTGUG00000008233	RAD54L	94	95.726	ENSAPLG00000006389	RAD54L	100	95.726	Anas_platyrhynchos
ENSTGUG00000008233	RAD54L	100	89.785	ENSACAG00000002312	RAD54L	99	89.516	Anolis_carolinensis
ENSTGUG00000008233	RAD54L	99	84.070	ENSANAG00000035439	RAD54L	99	83.936	Aotus_nancymaae
ENSTGUG00000008233	RAD54L	99	79.408	ENSACLG00000018711	rad54l	99	79.004	Astatotilapia_calliptera
ENSTGUG00000008233	RAD54L	99	82.615	ENSAMXG00000012777	rad54l	99	82.615	Astyanax_mexicanus
ENSTGUG00000008233	RAD54L	99	84.626	ENSBTAG00000019901	RAD54L	99	84.492	Bos_taurus
ENSTGUG00000008233	RAD54L	93	59.568	WBGene00004298	rad-54	84	59.568	Caenorhabditis_elegans
ENSTGUG00000008233	RAD54L	97	84.743	ENSCJAG00000021080	RAD54L	91	84.605	Callithrix_jacchus
ENSTGUG00000008233	RAD54L	99	83.936	ENSCAFG00000004272	RAD54L	99	83.802	Canis_familiaris
ENSTGUG00000008233	RAD54L	99	83.936	ENSCAFG00020015066	RAD54L	99	83.802	Canis_lupus_dingo
ENSTGUG00000008233	RAD54L	99	84.225	ENSCHIG00000020118	RAD54L	99	84.091	Capra_hircus
ENSTGUG00000008233	RAD54L	99	82.865	ENSTSYG00000002032	RAD54L	99	82.731	Carlito_syrichta
ENSTGUG00000008233	RAD54L	99	84.873	ENSCPOG00000006768	RAD54L	99	84.739	Cavia_porcellus
ENSTGUG00000008233	RAD54L	99	84.471	ENSCCAG00000025783	RAD54L	99	84.337	Cebus_capucinus
ENSTGUG00000008233	RAD54L	99	84.337	ENSCATG00000030589	RAD54L	99	84.203	Cercocebus_atys
ENSTGUG00000008233	RAD54L	99	84.605	ENSCLAG00000004645	RAD54L	99	84.471	Chinchilla_lanigera
ENSTGUG00000008233	RAD54L	99	84.203	ENSCSAG00000001229	RAD54L	99	84.070	Chlorocebus_sabaeus
ENSTGUG00000008233	RAD54L	100	90.323	ENSCPBG00000005675	RAD54L	99	89.919	Chrysemys_picta_bellii
ENSTGUG00000008233	RAD54L	99	64.212	ENSCING00000024456	-	99	63.871	Ciona_intestinalis
ENSTGUG00000008233	RAD54L	99	63.542	ENSCSAVG00000010859	-	99	63.268	Ciona_savignyi
ENSTGUG00000008233	RAD54L	99	84.337	ENSCANG00000034891	RAD54L	99	84.203	Colobus_angolensis_palliatus
ENSTGUG00000008233	RAD54L	99	83.802	ENSCGRG00001014807	Rad54l	99	83.668	Cricetulus_griseus_chok1gshd
ENSTGUG00000008233	RAD54L	99	83.802	ENSCGRG00000016038	Rad54l	99	83.668	Cricetulus_griseus_crigri
ENSTGUG00000008233	RAD54L	99	79.920	ENSCSEG00000001983	rad54l	99	79.518	Cynoglossus_semilaevis
ENSTGUG00000008233	RAD54L	87	82.800	ENSCVAG00000019561	rad54l	99	82.800	Cyprinodon_variegatus
ENSTGUG00000008233	RAD54L	99	81.292	ENSDARG00000018623	rad54l	99	81.292	Danio_rerio
ENSTGUG00000008233	RAD54L	99	84.070	ENSDNOG00000003395	RAD54L	99	83.936	Dasypus_novemcinctus
ENSTGUG00000008233	RAD54L	99	75.567	ENSDORG00000002632	Rad54l	99	75.434	Dipodomys_ordii
ENSTGUG00000008233	RAD54L	99	55.040	FBgn0002989	okr	86	58.910	Drosophila_melanogaster
ENSTGUG00000008233	RAD54L	78	84.749	ENSETEG00000000550	RAD54L	78	84.532	Echinops_telfairi
ENSTGUG00000008233	RAD54L	99	83.802	ENSEASG00005004511	RAD54L	99	83.668	Equus_asinus_asinus
ENSTGUG00000008233	RAD54L	99	84.203	ENSECAG00000008760	RAD54L	99	84.369	Equus_caballus
ENSTGUG00000008233	RAD54L	99	80.455	ENSEEUG00000008113	RAD54L	99	80.321	Erinaceus_europaeus
ENSTGUG00000008233	RAD54L	99	81.928	ENSELUG00000002295	rad54l	99	81.526	Esox_lucius
ENSTGUG00000008233	RAD54L	99	84.112	ENSFCAG00000003444	RAD54L	99	83.936	Felis_catus
ENSTGUG00000008233	RAD54L	100	97.177	ENSFALG00000009480	RAD54L	100	97.177	Ficedula_albicollis
ENSTGUG00000008233	RAD54L	99	83.668	ENSFDAG00000007806	RAD54L	99	83.534	Fukomys_damarensis
ENSTGUG00000008233	RAD54L	61	79.157	ENSFHEG00000009824	rad54l	78	79.029	Fundulus_heteroclitus
ENSTGUG00000008233	RAD54L	99	80.888	ENSGMOG00000014568	rad54l	99	80.754	Gadus_morhua
ENSTGUG00000008233	RAD54L	100	93.683	ENSGALG00000010356	RAD54L	92	93.548	Gallus_gallus
ENSTGUG00000008233	RAD54L	91	79.649	ENSGAFG00000011110	rad54l	99	79.499	Gambusia_affinis
ENSTGUG00000008233	RAD54L	99	79.732	ENSGACG00000003111	rad54l	97	79.570	Gasterosteus_aculeatus
ENSTGUG00000008233	RAD54L	100	89.919	ENSGAGG00000014089	RAD54L	96	89.516	Gopherus_agassizii
ENSTGUG00000008233	RAD54L	99	83.802	ENSGGOG00000010602	RAD54L	99	83.668	Gorilla_gorilla
ENSTGUG00000008233	RAD54L	99	79.273	ENSHBUG00000007793	rad54l	99	78.869	Haplochromis_burtoni
ENSTGUG00000008233	RAD54L	99	84.471	ENSHGLG00000000753	RAD54L	99	84.070	Heterocephalus_glaber_female
ENSTGUG00000008233	RAD54L	99	84.471	ENSHGLG00100016987	RAD54L	99	84.070	Heterocephalus_glaber_male
ENSTGUG00000008233	RAD54L	99	80.619	ENSIPUG00000015999	rad54l	99	84.029	Ictalurus_punctatus
ENSTGUG00000008233	RAD54L	99	84.225	ENSSTOG00000029125	RAD54L	99	84.070	Ictidomys_tridecemlineatus
ENSTGUG00000008233	RAD54L	99	70.549	ENSJJAG00000000235	-	99	70.281	Jaculus_jaculus
ENSTGUG00000008233	RAD54L	99	79.139	ENSKMAG00000009944	rad54l	99	79.139	Kryptolebias_marmoratus
ENSTGUG00000008233	RAD54L	99	81.377	ENSLBEG00000014617	rad54l	97	84.226	Labrus_bergylta
ENSTGUG00000008233	RAD54L	99	82.234	ENSLOCG00000004144	rad54l	99	83.531	Lepisosteus_oculatus
ENSTGUG00000008233	RAD54L	99	83.936	ENSLAFG00000007583	RAD54L	99	84.203	Loxodonta_africana
ENSTGUG00000008233	RAD54L	99	84.471	ENSMFAG00000031241	RAD54L	99	84.337	Macaca_fascicularis
ENSTGUG00000008233	RAD54L	99	84.471	ENSMMUG00000011568	RAD54L	99	84.337	Macaca_mulatta
ENSTGUG00000008233	RAD54L	99	84.203	ENSMNEG00000038562	RAD54L	99	84.070	Macaca_nemestrina
ENSTGUG00000008233	RAD54L	99	84.337	ENSMLEG00000038145	RAD54L	99	84.203	Mandrillus_leucophaeus
ENSTGUG00000008233	RAD54L	99	80.432	ENSMAMG00000022180	rad54l	99	83.752	Mastacembelus_armatus
ENSTGUG00000008233	RAD54L	99	79.273	ENSMZEG00005018081	rad54l	99	78.869	Maylandia_zebra
ENSTGUG00000008233	RAD54L	100	93.683	ENSMGAG00000010634	RAD54L	99	93.548	Meleagris_gallopavo
ENSTGUG00000008233	RAD54L	99	83.802	ENSMAUG00000020076	Rad54l	99	83.668	Mesocricetus_auratus
ENSTGUG00000008233	RAD54L	99	84.873	ENSMICG00000003266	RAD54L	99	84.739	Microcebus_murinus
ENSTGUG00000008233	RAD54L	99	84.337	ENSMOCG00000001778	Rad54l	99	83.936	Microtus_ochrogaster
ENSTGUG00000008233	RAD54L	99	78.331	ENSMALG00000021148	rad54l	99	77.927	Monopterus_albus
ENSTGUG00000008233	RAD54L	99	80.208	MGP_CAROLIEiJ_G0026325	Rad54l	99	80.078	Mus_caroli
ENSTGUG00000008233	RAD54L	99	84.605	ENSMUSG00000028702	Rad54l	99	84.471	Mus_musculus
ENSTGUG00000008233	RAD54L	99	83.914	MGP_PahariEiJ_G0028657	Rad54l	99	83.780	Mus_pahari
ENSTGUG00000008233	RAD54L	99	84.739	MGP_SPRETEiJ_G0027297	Rad54l	99	84.605	Mus_spretus
ENSTGUG00000008233	RAD54L	99	84.000	ENSMPUG00000012883	RAD54L	99	83.824	Mustela_putorius_furo
ENSTGUG00000008233	RAD54L	99	84.471	ENSMLUG00000003763	RAD54L	99	84.337	Myotis_lucifugus
ENSTGUG00000008233	RAD54L	99	82.597	ENSNGAG00000024213	Rad54l	99	82.463	Nannospalax_galili
ENSTGUG00000008233	RAD54L	99	83.936	ENSNLEG00000016548	RAD54L	99	83.802	Nomascus_leucogenys
ENSTGUG00000008233	RAD54L	90	84.993	ENSMEUG00000006793	RAD54L	99	84.993	Notamacropus_eugenii
ENSTGUG00000008233	RAD54L	90	83.624	ENSOPRG00000016016	RAD54L	90	83.624	Ochotona_princeps
ENSTGUG00000008233	RAD54L	99	84.471	ENSODEG00000008519	RAD54L	99	84.337	Octodon_degus
ENSTGUG00000008233	RAD54L	99	79.139	ENSONIG00000007659	rad54l	99	78.735	Oreochromis_niloticus
ENSTGUG00000008233	RAD54L	99	84.203	ENSOCUG00000005229	RAD54L	99	84.070	Oryctolagus_cuniculus
ENSTGUG00000008233	RAD54L	99	78.841	ENSORLG00000002958	rad54l	99	79.245	Oryzias_latipes
ENSTGUG00000008233	RAD54L	100	79.301	ENSORLG00020006554	rad54l	99	82.379	Oryzias_latipes_hni
ENSTGUG00000008233	RAD54L	99	78.976	ENSORLG00015002907	rad54l	99	79.380	Oryzias_latipes_hsok
ENSTGUG00000008233	RAD54L	99	79.650	ENSOMEG00000007770	rad54l	99	79.650	Oryzias_melastigma
ENSTGUG00000008233	RAD54L	99	84.112	ENSOARG00000002264	RAD54L	99	83.979	Ovis_aries
ENSTGUG00000008233	RAD54L	99	84.070	ENSPPAG00000031222	RAD54L	99	83.936	Pan_paniscus
ENSTGUG00000008233	RAD54L	99	84.112	ENSPPRG00000010317	RAD54L	99	83.936	Panthera_pardus
ENSTGUG00000008233	RAD54L	99	84.112	ENSPTIG00000012200	RAD54L	99	83.936	Panthera_tigris_altaica
ENSTGUG00000008233	RAD54L	99	83.802	ENSPTRG00000000689	RAD54L	99	83.668	Pan_troglodytes
ENSTGUG00000008233	RAD54L	99	84.337	ENSPANG00000016295	RAD54L	99	84.203	Papio_anubis
ENSTGUG00000008233	RAD54L	99	78.360	ENSPKIG00000016172	rad54l	99	78.226	Paramormyrops_kingsleyae
ENSTGUG00000008233	RAD54L	99	90.489	ENSPSIG00000003258	RAD54L	98	91.099	Pelodiscus_sinensis
ENSTGUG00000008233	RAD54L	99	76.985	ENSPMGG00000016335	rad54l	99	76.985	Periophthalmus_magnuspinnatus
ENSTGUG00000008233	RAD54L	99	83.534	ENSPEMG00000011422	Rad54l	99	83.400	Peromyscus_maniculatus_bairdii
ENSTGUG00000008233	RAD54L	99	71.524	ENSPMAG00000007719	rad54l	99	71.123	Petromyzon_marinus
ENSTGUG00000008233	RAD54L	99	85.753	ENSPCIG00000029032	RAD54L	99	85.618	Phascolarctos_cinereus
ENSTGUG00000008233	RAD54L	85	83.123	ENSPFOG00000013732	rad54l	99	83.123	Poecilia_formosa
ENSTGUG00000008233	RAD54L	82	81.331	ENSPLAG00000023416	rad54l	99	81.331	Poecilia_latipinna
ENSTGUG00000008233	RAD54L	91	79.795	ENSPMEG00000008299	rad54l	99	79.794	Poecilia_mexicana
ENSTGUG00000008233	RAD54L	99	78.418	ENSPREG00000019955	rad54l	99	78.197	Poecilia_reticulata
ENSTGUG00000008233	RAD54L	99	70.989	ENSPPYG00000001398	RAD54L	99	71.658	Pongo_abelii
ENSTGUG00000008233	RAD54L	80	83.981	ENSPCAG00000005323	RAD54L	80	83.981	Procavia_capensis
ENSTGUG00000008233	RAD54L	99	84.605	ENSPCOG00000015423	RAD54L	99	84.471	Propithecus_coquereli
ENSTGUG00000008233	RAD54L	99	76.330	ENSPNYG00000002942	rad54l	99	75.464	Pundamilia_nyererei
ENSTGUG00000008233	RAD54L	99	81.561	ENSPNAG00000012483	rad54l	99	81.561	Pygocentrus_nattereri
ENSTGUG00000008233	RAD54L	99	84.605	ENSRNOG00000013148	Rad54l	99	84.471	Rattus_norvegicus
ENSTGUG00000008233	RAD54L	99	84.337	ENSRBIG00000043495	RAD54L	99	84.203	Rhinopithecus_bieti
ENSTGUG00000008233	RAD54L	99	84.471	ENSRROG00000020844	RAD54L	99	84.337	Rhinopithecus_roxellana
ENSTGUG00000008233	RAD54L	81	48.992	YGL163C	RAD54	71	48.992	Saccharomyces_cerevisiae
ENSTGUG00000008233	RAD54L	99	84.337	ENSSBOG00000024672	RAD54L	99	84.203	Saimiri_boliviensis_boliviensis
ENSTGUG00000008233	RAD54L	99	85.791	ENSSHAG00000000110	RAD54L	99	85.657	Sarcophilus_harrisii
ENSTGUG00000008233	RAD54L	99	80.888	ENSSDUG00000019147	rad54l	99	80.754	Seriola_dumerili
ENSTGUG00000008233	RAD54L	99	81.023	ENSSLDG00000012330	rad54l	99	80.888	Seriola_lalandi_dorsalis
ENSTGUG00000008233	RAD54L	84	82.051	ENSSARG00000006689	RAD54L	99	81.891	Sorex_araneus
ENSTGUG00000008233	RAD54L	99	79.946	ENSSPAG00000011016	rad54l	99	79.677	Stegastes_partitus
ENSTGUG00000008233	RAD54L	99	83.888	ENSSSCG00000003905	RAD54L	99	83.936	Sus_scrofa
ENSTGUG00000008233	RAD54L	99	76.613	ENSTRUG00000008410	rad54l	99	76.210	Takifugu_rubripes
ENSTGUG00000008233	RAD54L	99	76.312	ENSTNIG00000004716	rad54l	99	76.242	Tetraodon_nigroviridis
ENSTGUG00000008233	RAD54L	99	78.179	ENSTTRG00000006315	RAD54L	99	78.046	Tursiops_truncatus
ENSTGUG00000008233	RAD54L	99	83.266	ENSUAMG00000011824	RAD54L	99	83.176	Ursus_americanus
ENSTGUG00000008233	RAD54L	99	82.329	ENSUMAG00000023603	RAD54L	99	82.234	Ursus_maritimus
ENSTGUG00000008233	RAD54L	99	83.668	ENSVVUG00000007201	RAD54L	99	83.534	Vulpes_vulpes
ENSTGUG00000008233	RAD54L	96	81.145	ENSXETG00000004369	rad54l	99	81.145	Xenopus_tropicalis
ENSTGUG00000008233	RAD54L	56	75.303	ENSXCOG00000016028	rad54l	80	79.837	Xiphophorus_couchianus