EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000008548 (Gene tree)
Gene ID: 100219845
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 7343 bases
Position: chr18:8531628-8538970
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000008812	tRNA_int_end_N2	PF12928.7	7.7e-17	1	1
ENSTGUP00000008809	tRNA_int_end_N2	PF12928.7	8.6e-17	1	1
ENSTGUP00000008807	tRNA_int_end_N2	PF12928.7	9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000008902	TSEN54-202	1356	-	ENSTGUP00000008809	451 (aa)	-	H0ZDZ7
ENSTGUT00000008900	TSEN54-201	1359	-	ENSTGUP00000008807	452 (aa)	-	H0ZDZ5
ENSTGUT00000008905	TSEN54-203	1353	-	ENSTGUP00000008812	451 (aa)	-	H0ZE00

Gene Model

Click here to download ENSTGUG00000008548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000008548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000008548	TSEN54	100	53.319	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSTGUG00000008548	TSEN54	99	48.472	ENSAPOG00000009659	tsen54	99	46.512	Acanthochromis_polyacanthus
ENSTGUG00000008548	TSEN54	100	51.641	ENSAMEG00000009414	TSEN54	86	51.641	Ailuropoda_melanoleuca
ENSTGUG00000008548	TSEN54	99	48.018	ENSAOCG00000000152	tsen54	84	48.238	Amphiprion_ocellaris
ENSTGUG00000008548	TSEN54	99	48.238	ENSAPEG00000018931	tsen54	83	48.238	Amphiprion_percula
ENSTGUG00000008548	TSEN54	99	44.181	ENSATEG00000019860	tsen54	86	44.181	Anabas_testudineus
ENSTGUG00000008548	TSEN54	100	82.119	ENSAPLG00000009419	TSEN54	100	82.119	Anas_platyrhynchos
ENSTGUG00000008548	TSEN54	99	58.940	ENSACAG00000006714	TSEN54	86	59.161	Anolis_carolinensis
ENSTGUG00000008548	TSEN54	100	52.655	ENSANAG00000024061	TSEN54	85	52.655	Aotus_nancymaae
ENSTGUG00000008548	TSEN54	99	44.835	ENSACLG00000019800	tsen54	86	45.254	Astatotilapia_calliptera
ENSTGUG00000008548	TSEN54	99	48.352	ENSAMXG00000006546	tsen54	85	49.020	Astyanax_mexicanus
ENSTGUG00000008548	TSEN54	100	51.762	ENSBTAG00000000824	TSEN54	86	52.632	Bos_taurus
ENSTGUG00000008548	TSEN54	100	53.097	ENSCJAG00000014278	TSEN54	85	53.097	Callithrix_jacchus
ENSTGUG00000008548	TSEN54	100	52.079	ENSCAFG00000004798	TSEN54	86	52.079	Canis_familiaris
ENSTGUG00000008548	TSEN54	100	52.079	ENSCAFG00020000312	TSEN54	86	52.079	Canis_lupus_dingo
ENSTGUG00000008548	TSEN54	100	53.187	ENSCHIG00000019908	TSEN54	86	53.084	Capra_hircus
ENSTGUG00000008548	TSEN54	100	52.308	ENSTSYG00000037439	TSEN54	100	52.308	Carlito_syrichta
ENSTGUG00000008548	TSEN54	100	52.876	ENSCCAG00000036624	TSEN54	85	52.876	Cebus_capucinus
ENSTGUG00000008548	TSEN54	100	53.097	ENSCATG00000042877	TSEN54	85	53.097	Cercocebus_atys
ENSTGUG00000008548	TSEN54	100	51.982	ENSCLAG00000002924	TSEN54	86	51.982	Chinchilla_lanigera
ENSTGUG00000008548	TSEN54	100	52.876	ENSCSAG00000004809	TSEN54	86	52.876	Chlorocebus_sabaeus
ENSTGUG00000008548	TSEN54	99	69.737	ENSCPBG00000028071	TSEN54	87	69.737	Chrysemys_picta_bellii
ENSTGUG00000008548	TSEN54	78	40.196	ENSCING00000018281	-	76	40.196	Ciona_intestinalis
ENSTGUG00000008548	TSEN54	100	52.876	ENSCANG00000028053	TSEN54	86	52.876	Colobus_angolensis_palliatus
ENSTGUG00000008548	TSEN54	100	51.656	ENSCGRG00001020029	Tsen54	86	51.656	Cricetulus_griseus_chok1gshd
ENSTGUG00000008548	TSEN54	98	51.351	ENSCGRG00000016289	Tsen54	100	51.351	Cricetulus_griseus_crigri
ENSTGUG00000008548	TSEN54	94	40.421	ENSCSEG00000020586	tsen54	99	40.421	Cynoglossus_semilaevis
ENSTGUG00000008548	TSEN54	94	45.863	ENSDARG00000036844	tsen54	99	47.086	Danio_rerio
ENSTGUG00000008548	TSEN54	100	51.422	ENSDNOG00000018452	TSEN54	86	51.844	Dasypus_novemcinctus
ENSTGUG00000008548	TSEN54	100	51.549	ENSDORG00000004073	Tsen54	86	51.549	Dipodomys_ordii
ENSTGUG00000008548	TSEN54	99	32.272	ENSEBUG00000005203	TSEN54	84	32.272	Eptatretus_burgeri
ENSTGUG00000008548	TSEN54	100	52.632	ENSEASG00005000579	TSEN54	86	52.632	Equus_asinus_asinus
ENSTGUG00000008548	TSEN54	100	52.632	ENSECAG00000004924	TSEN54	86	52.632	Equus_caballus
ENSTGUG00000008548	TSEN54	100	49.351	ENSEEUG00000008467	TSEN54	100	50.000	Erinaceus_europaeus
ENSTGUG00000008548	TSEN54	99	44.586	ENSELUG00000017703	tsen54	80	44.586	Esox_lucius
ENSTGUG00000008548	TSEN54	100	53.173	ENSFCAG00000023712	TSEN54	86	53.173	Felis_catus
ENSTGUG00000008548	TSEN54	99	93.778	ENSFALG00000001119	TSEN54	86	93.778	Ficedula_albicollis
ENSTGUG00000008548	TSEN54	100	52.097	ENSFDAG00000019090	TSEN54	99	52.097	Fukomys_damarensis
ENSTGUG00000008548	TSEN54	99	46.460	ENSFHEG00000005470	tsen54	85	47.124	Fundulus_heteroclitus
ENSTGUG00000008548	TSEN54	79	48.276	ENSGMOG00000013146	tsen54	87	48.276	Gadus_morhua
ENSTGUG00000008548	TSEN54	100	76.201	ENSGALG00000047163	TSEN54	89	76.201	Gallus_gallus
ENSTGUG00000008548	TSEN54	99	46.889	ENSGAFG00000005111	tsen54	85	47.556	Gambusia_affinis
ENSTGUG00000008548	TSEN54	99	43.107	ENSGACG00000014987	tsen54	88	43.326	Gasterosteus_aculeatus
ENSTGUG00000008548	TSEN54	100	70.961	ENSGAGG00000006825	TSEN54	86	70.961	Gopherus_agassizii
ENSTGUG00000008548	TSEN54	100	53.540	ENSGGOG00000009417	TSEN54	89	53.540	Gorilla_gorilla
ENSTGUG00000008548	TSEN54	89	44.307	ENSHBUG00000018296	tsen54	89	41.579	Haplochromis_burtoni
ENSTGUG00000008548	TSEN54	100	52.434	ENSHGLG00000007979	TSEN54	86	52.434	Heterocephalus_glaber_female
ENSTGUG00000008548	TSEN54	100	52.434	ENSHGLG00100005497	TSEN54	86	52.434	Heterocephalus_glaber_male
ENSTGUG00000008548	TSEN54	94	44.028	ENSHCOG00000007481	tsen54	99	44.028	Hippocampus_comes
ENSTGUG00000008548	TSEN54	99	43.326	ENSIPUG00000000590	tsen54	85	44.201	Ictalurus_punctatus
ENSTGUG00000008548	TSEN54	100	50.221	ENSSTOG00000012883	TSEN54	86	50.221	Ictidomys_tridecemlineatus
ENSTGUG00000008548	TSEN54	100	52.747	ENSJJAG00000007365	Tsen54	86	52.747	Jaculus_jaculus
ENSTGUG00000008548	TSEN54	99	44.492	ENSKMAG00000006944	tsen54	86	44.492	Kryptolebias_marmoratus
ENSTGUG00000008548	TSEN54	99	43.736	ENSLBEG00000004199	tsen54	86	43.736	Labrus_bergylta
ENSTGUG00000008548	TSEN54	99	44.658	ENSLACG00000009497	TSEN54	88	44.658	Latimeria_chalumnae
ENSTGUG00000008548	TSEN54	100	47.046	ENSLOCG00000011191	tsen54	86	47.046	Lepisosteus_oculatus
ENSTGUG00000008548	TSEN54	99	51.422	ENSLAFG00000011655	TSEN54	86	51.634	Loxodonta_africana
ENSTGUG00000008548	TSEN54	100	53.319	ENSMFAG00000000712	TSEN54	86	53.319	Macaca_fascicularis
ENSTGUG00000008548	TSEN54	100	53.097	ENSMNEG00000029199	TSEN54	86	53.097	Macaca_nemestrina
ENSTGUG00000008548	TSEN54	100	52.876	ENSMLEG00000044168	TSEN54	88	52.876	Mandrillus_leucophaeus
ENSTGUG00000008548	TSEN54	99	45.898	ENSMAMG00000019773	tsen54	86	45.898	Mastacembelus_armatus
ENSTGUG00000008548	TSEN54	99	45.033	ENSMZEG00005000884	tsen54	86	45.033	Maylandia_zebra
ENSTGUG00000008548	TSEN54	99	75.705	ENSMGAG00000009556	TSEN54	86	75.705	Meleagris_gallopavo
ENSTGUG00000008548	TSEN54	100	52.193	ENSMAUG00000016838	Tsen54	86	52.193	Mesocricetus_auratus
ENSTGUG00000008548	TSEN54	100	51.549	ENSMICG00000044012	TSEN54	85	51.549	Microcebus_murinus
ENSTGUG00000008548	TSEN54	100	51.991	ENSMOCG00000021585	Tsen54	86	51.991	Microtus_ochrogaster
ENSTGUG00000008548	TSEN54	73	68.000	ENSMMOG00000020189	tsen54	74	68.000	Mola_mola
ENSTGUG00000008548	TSEN54	100	52.340	ENSMODG00000007438	TSEN54	85	52.340	Monodelphis_domestica
ENSTGUG00000008548	TSEN54	99	44.118	ENSMALG00000020573	tsen54	86	43.908	Monopterus_albus
ENSTGUG00000008548	TSEN54	100	51.322	MGP_CAROLIEiJ_G0017417	Tsen54	86	51.322	Mus_caroli
ENSTGUG00000008548	TSEN54	100	52.203	ENSMUSG00000020781	Tsen54	86	52.203	Mus_musculus
ENSTGUG00000008548	TSEN54	100	51.844	MGP_PahariEiJ_G0018547	Tsen54	86	51.844	Mus_pahari
ENSTGUG00000008548	TSEN54	100	52.747	MGP_SPRETEiJ_G0018262	Tsen54	86	52.747	Mus_spretus
ENSTGUG00000008548	TSEN54	100	51.860	ENSMPUG00000013870	TSEN54	86	51.860	Mustela_putorius_furo
ENSTGUG00000008548	TSEN54	100	53.744	ENSMLUG00000015298	TSEN54	87	53.744	Myotis_lucifugus
ENSTGUG00000008548	TSEN54	100	51.876	ENSNGAG00000015673	Tsen54	86	51.876	Nannospalax_galili
ENSTGUG00000008548	TSEN54	100	49.011	ENSMEUG00000011908	TSEN54	97	49.011	Notamacropus_eugenii
ENSTGUG00000008548	TSEN54	100	49.119	ENSOPRG00000012513	TSEN54	85	49.119	Ochotona_princeps
ENSTGUG00000008548	TSEN54	99	45.055	ENSONIG00000009543	tsen54	86	45.055	Oreochromis_niloticus
ENSTGUG00000008548	TSEN54	100	49.779	ENSOCUG00000009875	TSEN54	84	50.441	Oryctolagus_cuniculus
ENSTGUG00000008548	TSEN54	99	44.444	ENSORLG00000000852	tsen54	85	44.444	Oryzias_latipes
ENSTGUG00000008548	TSEN54	99	43.584	ENSORLG00020018221	tsen54	96	44.176	Oryzias_latipes_hni
ENSTGUG00000008548	TSEN54	99	44.248	ENSORLG00015009413	tsen54	83	56.250	Oryzias_latipes_hsok
ENSTGUG00000008548	TSEN54	99	44.690	ENSOMEG00000014402	tsen54	83	44.690	Oryzias_melastigma
ENSTGUG00000008548	TSEN54	100	48.894	ENSOGAG00000001442	TSEN54	86	48.894	Otolemur_garnettii
ENSTGUG00000008548	TSEN54	100	51.198	ENSOARG00000010361	TSEN54	100	51.974	Ovis_aries
ENSTGUG00000008548	TSEN54	100	53.982	ENSPPAG00000043519	TSEN54	91	53.982	Pan_paniscus
ENSTGUG00000008548	TSEN54	100	53.173	ENSPPRG00000009162	TSEN54	86	53.173	Panthera_pardus
ENSTGUG00000008548	TSEN54	100	54.425	ENSPTIG00000019312	TSEN54	96	54.425	Panthera_tigris_altaica
ENSTGUG00000008548	TSEN54	100	53.540	ENSPTRG00000009646	TSEN54	86	53.540	Pan_troglodytes
ENSTGUG00000008548	TSEN54	100	53.097	ENSPANG00000020133	TSEN54	86	53.097	Papio_anubis
ENSTGUG00000008548	TSEN54	100	42.268	ENSPKIG00000023018	tsen54	100	45.221	Paramormyrops_kingsleyae
ENSTGUG00000008548	TSEN54	94	66.121	ENSPSIG00000012807	TSEN54	99	66.121	Pelodiscus_sinensis
ENSTGUG00000008548	TSEN54	99	34.066	ENSPMGG00000019578	tsen54	91	34.066	Periophthalmus_magnuspinnatus
ENSTGUG00000008548	TSEN54	100	53.084	ENSPEMG00000014857	Tsen54	86	53.084	Peromyscus_maniculatus_bairdii
ENSTGUG00000008548	TSEN54	99	47.473	ENSPFOG00000022740	tsen54	85	48.132	Poecilia_formosa
ENSTGUG00000008548	TSEN54	99	47.566	ENSPLAG00000014847	tsen54	85	48.230	Poecilia_latipinna
ENSTGUG00000008548	TSEN54	99	47.124	ENSPMEG00000022876	tsen54	85	47.788	Poecilia_mexicana
ENSTGUG00000008548	TSEN54	99	46.239	ENSPREG00000013090	tsen54	85	46.903	Poecilia_reticulata
ENSTGUG00000008548	TSEN54	100	50.993	ENSPPYG00000008629	TSEN54	94	51.214	Pongo_abelii
ENSTGUG00000008548	TSEN54	70	68.687	ENSPCAG00000002093	TSEN54	63	68.687	Procavia_capensis
ENSTGUG00000008548	TSEN54	100	52.655	ENSPCOG00000027880	TSEN54	86	52.655	Propithecus_coquereli
ENSTGUG00000008548	TSEN54	100	52.954	ENSPVAG00000008446	TSEN54	86	52.954	Pteropus_vampyrus
ENSTGUG00000008548	TSEN54	99	45.633	ENSPNYG00000010217	tsen54	99	42.056	Pundamilia_nyererei
ENSTGUG00000008548	TSEN54	99	47.072	ENSPNAG00000003770	tsen54	86	47.835	Pygocentrus_nattereri
ENSTGUG00000008548	TSEN54	100	53.084	ENSRNOG00000004598	Tsen54	86	53.084	Rattus_norvegicus
ENSTGUG00000008548	TSEN54	100	52.876	ENSRBIG00000043040	TSEN54	86	52.876	Rhinopithecus_bieti
ENSTGUG00000008548	TSEN54	100	52.876	ENSRROG00000030797	TSEN54	86	52.876	Rhinopithecus_roxellana
ENSTGUG00000008548	TSEN54	100	49.779	ENSSBOG00000013543	TSEN54	85	49.779	Saimiri_boliviensis_boliviensis
ENSTGUG00000008548	TSEN54	100	51.606	ENSSHAG00000018127	TSEN54	85	51.606	Sarcophilus_harrisii
ENSTGUG00000008548	TSEN54	94	44.965	ENSSFOG00015004093	tsen54	100	45.199	Scleropages_formosus
ENSTGUG00000008548	TSEN54	99	44.444	ENSSMAG00000012449	tsen54	99	44.743	Scophthalmus_maximus
ENSTGUG00000008548	TSEN54	99	46.272	ENSSDUG00000021506	tsen54	86	46.272	Seriola_dumerili
ENSTGUG00000008548	TSEN54	99	46.053	ENSSLDG00000016303	tsen54	86	46.053	Seriola_lalandi_dorsalis
ENSTGUG00000008548	TSEN54	80	56.640	ENSSPUG00000008988	TSEN54	83	56.640	Sphenodon_punctatus
ENSTGUG00000008548	TSEN54	94	43.632	ENSSPAG00000008047	tsen54	99	43.632	Stegastes_partitus
ENSTGUG00000008548	TSEN54	99	46.460	ENSSPAG00000008098	-	99	43.632	Stegastes_partitus
ENSTGUG00000008548	TSEN54	100	53.043	ENSSSCG00000036852	TSEN54	96	53.930	Sus_scrofa
ENSTGUG00000008548	TSEN54	99	43.973	ENSTRUG00000004230	tsen54	85	44.643	Takifugu_rubripes
ENSTGUG00000008548	TSEN54	99	42.299	ENSTNIG00000011281	tsen54	87	43.750	Tetraodon_nigroviridis
ENSTGUG00000008548	TSEN54	100	51.747	ENSTTRG00000015828	TSEN54	100	51.747	Tursiops_truncatus
ENSTGUG00000008548	TSEN54	94	49.535	ENSUAMG00000010045	TSEN54	100	49.535	Ursus_americanus
ENSTGUG00000008548	TSEN54	97	50.562	ENSUMAG00000008979	TSEN54	100	50.562	Ursus_maritimus
ENSTGUG00000008548	TSEN54	100	52.516	ENSVVUG00000011411	TSEN54	87	52.516	Vulpes_vulpes
ENSTGUG00000008548	TSEN54	99	50.220	ENSXETG00000012532	tsen54	74	70.968	Xenopus_tropicalis
ENSTGUG00000008548	TSEN54	77	66.000	ENSXCOG00000018245	tsen54	99	42.361	Xiphophorus_couchianus
ENSTGUG00000008548	TSEN54	99	46.222	ENSXMAG00000018818	tsen54	85	46.889	Xiphophorus_maculatus