EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000008705 (Gene tree)
Gene ID: 100232459
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 7018 bases
Position: chr4:47760452-47767469
Accession: 100232459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000008967	RRM_1	PF00076.22	3.9e-39	1	3
ENSTGUP00000008967	RRM_1	PF00076.22	3.9e-39	2	3
ENSTGUP00000008967	RRM_1	PF00076.22	3.9e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000009064	RBM47-201	1785	XM_002187738	ENSTGUP00000008967	594 (aa)	XP_002187774	H0ZEF5

Gene Model

Click here to download ENSTGUG00000008705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000008705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000008705	RBM47	54	53.870	ENSTGUG00000000880	HNRNPR	65	55.161
ENSTGUG00000008705	RBM47	53	69.108	ENSTGUG00000005307	RBM46	63	72.297
ENSTGUG00000008705	RBM47	73	58.734	ENSTGUG00000005090	A1CF	74	59.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000008705	RBM47	100	89.950	ENSG00000163694	RBM47	100	92.627	Homo_sapiens
ENSTGUG00000008705	RBM47	100	77.629	ENSAPOG00000011062	rbm47	100	81.888	Acanthochromis_polyacanthus
ENSTGUG00000008705	RBM47	100	89.316	ENSAMEG00000009672	RBM47	100	89.816	Ailuropoda_melanoleuca
ENSTGUG00000008705	RBM47	100	79.466	ENSACIG00000011531	rbm47	100	78.297	Amphilophus_citrinellus
ENSTGUG00000008705	RBM47	100	79.264	ENSAOCG00000022245	rbm47	100	81.888	Amphiprion_ocellaris
ENSTGUG00000008705	RBM47	100	78.930	ENSAPEG00000018304	rbm47	100	81.888	Amphiprion_percula
ENSTGUG00000008705	RBM47	100	77.905	ENSATEG00000018400	rbm47	100	76.923	Anabas_testudineus
ENSTGUG00000008705	RBM47	100	95.294	ENSAPLG00000013974	RBM47	100	95.294	Anas_platyrhynchos
ENSTGUG00000008705	RBM47	100	89.000	ENSACAG00000011833	RBM47	100	88.833	Anolis_carolinensis
ENSTGUG00000008705	RBM47	100	90.452	ENSANAG00000029440	RBM47	100	89.447	Aotus_nancymaae
ENSTGUG00000008705	RBM47	100	78.827	ENSACLG00000016902	rbm47	100	83.887	Astatotilapia_calliptera
ENSTGUG00000008705	RBM47	96	79.412	ENSAMXG00000021794	rbm47	100	76.596	Astyanax_mexicanus
ENSTGUG00000008705	RBM47	100	90.909	ENSBTAG00000002356	RBM47	100	90.741	Bos_taurus
ENSTGUG00000008705	RBM47	100	90.236	ENSCJAG00000019385	RBM47	100	89.130	Callithrix_jacchus
ENSTGUG00000008705	RBM47	96	90.035	ENSCAFG00000015898	RBM47	100	88.591	Canis_familiaris
ENSTGUG00000008705	RBM47	83	91.650	ENSCAFG00020010558	RBM47	94	89.706	Canis_lupus_dingo
ENSTGUG00000008705	RBM47	100	90.909	ENSCHIG00000026214	RBM47	100	90.741	Capra_hircus
ENSTGUG00000008705	RBM47	86	87.611	ENSTSYG00000033612	RBM47	93	87.611	Carlito_syrichta
ENSTGUG00000008705	RBM47	100	82.689	ENSCAPG00000008426	RBM47	100	82.689	Cavia_aperea
ENSTGUG00000008705	RBM47	100	88.739	ENSCPOG00000014100	RBM47	100	90.957	Cavia_porcellus
ENSTGUG00000008705	RBM47	99	61.474	ENSCCAG00000024397	-	99	61.149	Cebus_capucinus
ENSTGUG00000008705	RBM47	100	90.404	ENSCCAG00000030129	-	100	89.465	Cebus_capucinus
ENSTGUG00000008705	RBM47	100	89.950	ENSCATG00000042064	RBM47	100	89.447	Cercocebus_atys
ENSTGUG00000008705	RBM47	100	88.403	ENSCLAG00000001684	RBM47	100	90.957	Chinchilla_lanigera
ENSTGUG00000008705	RBM47	100	89.950	ENSCSAG00000017060	RBM47	100	89.447	Chlorocebus_sabaeus
ENSTGUG00000008705	RBM47	89	84.753	ENSCHOG00000011731	RBM47	88	84.081	Choloepus_hoffmanni
ENSTGUG00000008705	RBM47	100	94.305	ENSCPBG00000013831	RBM47	100	93.970	Chrysemys_picta_bellii
ENSTGUG00000008705	RBM47	100	90.452	ENSCANG00000019997	RBM47	100	89.447	Colobus_angolensis_palliatus
ENSTGUG00000008705	RBM47	100	87.625	ENSCGRG00001000623	-	100	87.458	Cricetulus_griseus_chok1gshd
ENSTGUG00000008705	RBM47	100	61.944	ENSCGRG00001020102	-	100	66.667	Cricetulus_griseus_chok1gshd
ENSTGUG00000008705	RBM47	100	61.779	ENSCGRG00000014760	-	100	66.162	Cricetulus_griseus_crigri
ENSTGUG00000008705	RBM47	100	86.789	ENSCGRG00000007762	-	100	87.975	Cricetulus_griseus_crigri
ENSTGUG00000008705	RBM47	100	76.294	ENSCSEG00000004545	rbm47	100	75.874	Cynoglossus_semilaevis
ENSTGUG00000008705	RBM47	100	77.554	ENSCVAG00000020144	rbm47	100	82.398	Cyprinodon_variegatus
ENSTGUG00000008705	RBM47	96	80.382	ENSDARG00000061985	rbm47	100	77.668	Danio_rerio
ENSTGUG00000008705	RBM47	100	88.721	ENSDNOG00000046854	RBM47	100	89.226	Dasypus_novemcinctus
ENSTGUG00000008705	RBM47	100	89.482	ENSDORG00000010144	Rbm47	100	89.482	Dipodomys_ordii
ENSTGUG00000008705	RBM47	97	90.189	ENSETEG00000009194	RBM47	100	89.950	Echinops_telfairi
ENSTGUG00000008705	RBM47	99	58.347	ENSEBUG00000011912	rbm47	91	61.594	Eptatretus_burgeri
ENSTGUG00000008705	RBM47	100	90.404	ENSEASG00005008443	RBM47	100	90.404	Equus_asinus_asinus
ENSTGUG00000008705	RBM47	100	90.404	ENSECAG00000004400	RBM47	100	90.404	Equus_caballus
ENSTGUG00000008705	RBM47	75	91.342	ENSEEUG00000001194	RBM47	75	91.342	Erinaceus_europaeus
ENSTGUG00000008705	RBM47	100	74.434	ENSELUG00000006148	rbm47	100	81.360	Esox_lucius
ENSTGUG00000008705	RBM47	100	90.572	ENSFCAG00000012399	RBM47	100	90.236	Felis_catus
ENSTGUG00000008705	RBM47	100	98.655	ENSFALG00000002861	RBM47	100	98.655	Ficedula_albicollis
ENSTGUG00000008705	RBM47	100	87.563	ENSFDAG00000016326	RBM47	100	87.059	Fukomys_damarensis
ENSTGUG00000008705	RBM47	100	78.727	ENSFHEG00000007938	rbm47	100	77.722	Fundulus_heteroclitus
ENSTGUG00000008705	RBM47	100	74.230	ENSGMOG00000014802	rbm47	100	74.230	Gadus_morhua
ENSTGUG00000008705	RBM47	63	98.670	ENSGALG00000014267	RBM47	99	98.670	Gallus_gallus
ENSTGUG00000008705	RBM47	63	84.043	ENSGAFG00000020571	rbm47	98	83.820	Gambusia_affinis
ENSTGUG00000008705	RBM47	100	75.000	ENSGACG00000016223	rbm47	100	79.494	Gasterosteus_aculeatus
ENSTGUG00000008705	RBM47	100	94.640	ENSGAGG00000020051	RBM47	100	94.305	Gopherus_agassizii
ENSTGUG00000008705	RBM47	100	89.950	ENSGGOG00000001367	RBM47	100	89.447	Gorilla_gorilla
ENSTGUG00000008705	RBM47	100	78.571	ENSHBUG00000003520	rbm47	100	83.887	Haplochromis_burtoni
ENSTGUG00000008705	RBM47	85	78.571	ENSHGLG00000016914	RBM47	100	87.975	Heterocephalus_glaber_female
ENSTGUG00000008705	RBM47	100	87.374	ENSHGLG00100014028	-	100	87.975	Heterocephalus_glaber_male
ENSTGUG00000008705	RBM47	100	78.451	ENSHGLG00100003071	-	100	78.620	Heterocephalus_glaber_male
ENSTGUG00000008705	RBM47	99	78.224	ENSHCOG00000002074	rbm47	99	81.122	Hippocampus_comes
ENSTGUG00000008705	RBM47	100	79.062	ENSIPUG00000004743	rbm47	100	78.559	Ictalurus_punctatus
ENSTGUG00000008705	RBM47	100	88.629	ENSSTOG00000004727	RBM47	100	89.130	Ictidomys_tridecemlineatus
ENSTGUG00000008705	RBM47	100	88.147	ENSJJAG00000013823	Rbm47	100	87.167	Jaculus_jaculus
ENSTGUG00000008705	RBM47	100	78.261	ENSKMAG00000000084	rbm47	100	80.612	Kryptolebias_marmoratus
ENSTGUG00000008705	RBM47	100	77.796	ENSLBEG00000008436	rbm47	100	80.102	Labrus_bergylta
ENSTGUG00000008705	RBM47	100	86.409	ENSLACG00000007196	RBM47	100	86.409	Latimeria_chalumnae
ENSTGUG00000008705	RBM47	100	83.585	ENSLOCG00000012966	rbm47	95	82.077	Lepisosteus_oculatus
ENSTGUG00000008705	RBM47	100	89.262	ENSLAFG00000011998	RBM47	100	89.597	Loxodonta_africana
ENSTGUG00000008705	RBM47	100	89.950	ENSMFAG00000037967	RBM47	100	89.447	Macaca_fascicularis
ENSTGUG00000008705	RBM47	100	89.950	ENSMMUG00000012036	RBM47	100	91.710	Macaca_mulatta
ENSTGUG00000008705	RBM47	100	89.950	ENSMNEG00000040774	RBM47	100	89.447	Macaca_nemestrina
ENSTGUG00000008705	RBM47	100	93.651	ENSMLEG00000041432	RBM47	100	93.651	Mandrillus_leucophaeus
ENSTGUG00000008705	RBM47	100	77.377	ENSMAMG00000019143	rbm47	99	82.776	Mastacembelus_armatus
ENSTGUG00000008705	RBM47	100	78.827	ENSMZEG00005023659	rbm47	99	83.887	Maylandia_zebra
ENSTGUG00000008705	RBM47	100	97.492	ENSMGAG00000012226	RBM47	100	97.492	Meleagris_gallopavo
ENSTGUG00000008705	RBM47	100	88.107	ENSMAUG00000006493	Rbm47	100	88.442	Mesocricetus_auratus
ENSTGUG00000008705	RBM47	100	84.007	ENSMICG00000026417	RBM47	100	86.436	Microcebus_murinus
ENSTGUG00000008705	RBM47	100	88.255	ENSMOCG00000021170	Rbm47	100	88.591	Microtus_ochrogaster
ENSTGUG00000008705	RBM47	100	77.541	ENSMMOG00000007260	rbm47	100	76.346	Mola_mola
ENSTGUG00000008705	RBM47	100	81.313	ENSMODG00000020561	-	100	80.808	Monodelphis_domestica
ENSTGUG00000008705	RBM47	100	91.275	ENSMODG00000007003	RBM47	100	90.101	Monodelphis_domestica
ENSTGUG00000008705	RBM47	52	81.962	ENSMODG00000015426	-	97	83.280	Monodelphis_domestica
ENSTGUG00000008705	RBM47	100	77.129	ENSMALG00000005167	rbm47	100	81.934	Monopterus_albus
ENSTGUG00000008705	RBM47	100	87.731	MGP_CAROLIEiJ_G0027258	Rbm47	100	88.067	Mus_caroli
ENSTGUG00000008705	RBM47	100	88.067	ENSMUSG00000070780	Rbm47	100	88.403	Mus_musculus
ENSTGUG00000008705	RBM47	100	88.067	MGP_PahariEiJ_G0017040	Rbm47	100	88.403	Mus_pahari
ENSTGUG00000008705	RBM47	100	88.047	MGP_SPRETEiJ_G0028253	Rbm47	100	88.215	Mus_spretus
ENSTGUG00000008705	RBM47	100	89.765	ENSMPUG00000006177	RBM47	94	90.101	Mustela_putorius_furo
ENSTGUG00000008705	RBM47	100	88.739	ENSMLUG00000000889	RBM47	100	89.076	Myotis_lucifugus
ENSTGUG00000008705	RBM47	100	88.610	ENSNGAG00000003325	Rbm47	100	88.945	Nannospalax_galili
ENSTGUG00000008705	RBM47	100	77.886	ENSNBRG00000015092	rbm47	100	78.049	Neolamprologus_brichardi
ENSTGUG00000008705	RBM47	100	89.782	ENSNLEG00000017151	RBM47	100	89.280	Nomascus_leucogenys
ENSTGUG00000008705	RBM47	72	87.703	ENSMEUG00000009516	-	100	86.543	Notamacropus_eugenii
ENSTGUG00000008705	RBM47	75	93.388	ENSOPRG00000016507	-	75	90.909	Ochotona_princeps
ENSTGUG00000008705	RBM47	100	88.235	ENSODEG00000004873	RBM47	100	88.739	Octodon_degus
ENSTGUG00000008705	RBM47	100	77.451	ENSONIG00000009061	rbm47	100	76.797	Oreochromis_niloticus
ENSTGUG00000008705	RBM47	100	87.167	ENSOANG00000008978	RBM47	100	87.000	Ornithorhynchus_anatinus
ENSTGUG00000008705	RBM47	100	89.916	ENSOCUG00000012034	RBM47	100	89.748	Oryctolagus_cuniculus
ENSTGUG00000008705	RBM47	100	77.219	ENSORLG00000005847	rbm47	100	81.491	Oryzias_latipes
ENSTGUG00000008705	RBM47	100	77.387	ENSORLG00020005154	rbm47	100	81.491	Oryzias_latipes_hni
ENSTGUG00000008705	RBM47	100	77.722	ENSORLG00015000066	rbm47	100	81.748	Oryzias_latipes_hsok
ENSTGUG00000008705	RBM47	100	78.894	ENSOMEG00000010730	rbm47	100	78.057	Oryzias_melastigma
ENSTGUG00000008705	RBM47	100	81.481	ENSOGAG00000025193	-	100	81.650	Otolemur_garnettii
ENSTGUG00000008705	RBM47	100	89.430	ENSOGAG00000029367	-	100	90.101	Otolemur_garnettii
ENSTGUG00000008705	RBM47	100	82.323	ENSOARG00000012711	RBM47	100	82.492	Ovis_aries
ENSTGUG00000008705	RBM47	100	89.782	ENSPPAG00000029763	RBM47	100	89.280	Pan_paniscus
ENSTGUG00000008705	RBM47	100	87.374	ENSPPRG00000012873	RBM47	99	92.021	Panthera_pardus
ENSTGUG00000008705	RBM47	85	87.723	ENSPTIG00000017046	RBM47	100	85.743	Panthera_tigris_altaica
ENSTGUG00000008705	RBM47	100	89.950	ENSPTRG00000016006	RBM47	100	89.447	Pan_troglodytes
ENSTGUG00000008705	RBM47	100	89.950	ENSPANG00000005980	RBM47	100	89.447	Papio_anubis
ENSTGUG00000008705	RBM47	96	76.562	ENSPKIG00000005037	rbm47	100	74.257	Paramormyrops_kingsleyae
ENSTGUG00000008705	RBM47	96	76.817	ENSPKIG00000013431	RBM47	98	83.204	Paramormyrops_kingsleyae
ENSTGUG00000008705	RBM47	89	94.518	ENSPSIG00000017516	RBM47	97	94.518	Pelodiscus_sinensis
ENSTGUG00000008705	RBM47	100	77.219	ENSPMGG00000018540	rbm47	100	75.960	Periophthalmus_magnuspinnatus
ENSTGUG00000008705	RBM47	100	87.940	ENSPEMG00000011088	Rbm47	100	88.275	Peromyscus_maniculatus_bairdii
ENSTGUG00000008705	RBM47	96	80.796	ENSPFOG00000007997	rbm47	100	76.911	Poecilia_formosa
ENSTGUG00000008705	RBM47	96	80.589	ENSPLAG00000002072	rbm47	100	84.043	Poecilia_latipinna
ENSTGUG00000008705	RBM47	100	79.466	ENSPMEG00000017492	rbm47	100	82.143	Poecilia_mexicana
ENSTGUG00000008705	RBM47	96	80.763	ENSPREG00000008456	rbm47	100	84.043	Poecilia_reticulata
ENSTGUG00000008705	RBM47	98	78.451	ENSPPYG00000014688	RBM47	100	77.441	Pongo_abelii
ENSTGUG00000008705	RBM47	81	91.771	ENSPCAG00000011879	RBM47	81	92.269	Procavia_capensis
ENSTGUG00000008705	RBM47	100	85.859	ENSPCOG00000023451	RBM47	100	86.700	Propithecus_coquereli
ENSTGUG00000008705	RBM47	100	89.262	ENSPVAG00000003812	RBM47	100	89.765	Pteropus_vampyrus
ENSTGUG00000008705	RBM47	100	78.444	ENSPNYG00000022868	rbm47	100	77.472	Pundamilia_nyererei
ENSTGUG00000008705	RBM47	100	76.432	ENSPNAG00000007940	rbm47	100	77.250	Pygocentrus_nattereri
ENSTGUG00000008705	RBM47	100	88.235	ENSRNOG00000002408	Rbm47	100	88.571	Rattus_norvegicus
ENSTGUG00000008705	RBM47	100	90.452	ENSRBIG00000039601	RBM47	100	89.447	Rhinopithecus_bieti
ENSTGUG00000008705	RBM47	100	90.452	ENSRROG00000044696	RBM47	100	89.447	Rhinopithecus_roxellana
ENSTGUG00000008705	RBM47	100	87.205	ENSSBOG00000028475	RBM47	100	90.515	Saimiri_boliviensis_boliviensis
ENSTGUG00000008705	RBM47	100	91.261	ENSSHAG00000017576	RBM47	100	90.420	Sarcophilus_harrisii
ENSTGUG00000008705	RBM47	98	76.342	ENSSFOG00015024101	RBM47	99	75.671	Scleropages_formosus
ENSTGUG00000008705	RBM47	100	74.257	ENSSFOG00015012445	rbm47	100	74.257	Scleropages_formosus
ENSTGUG00000008705	RBM47	100	75.407	ENSSMAG00000009744	rbm47	100	80.407	Scophthalmus_maximus
ENSTGUG00000008705	RBM47	100	79.229	ENSSDUG00000022684	rbm47	100	78.392	Seriola_dumerili
ENSTGUG00000008705	RBM47	100	79.899	ENSSLDG00000003109	rbm47	100	81.818	Seriola_lalandi_dorsalis
ENSTGUG00000008705	RBM47	85	90.828	ENSSARG00000001735	RBM47	75	91.051	Sorex_araneus
ENSTGUG00000008705	RBM47	100	91.625	ENSSPUG00000007515	RBM47	100	93.617	Sphenodon_punctatus
ENSTGUG00000008705	RBM47	100	80.134	ENSSPAG00000001257	rbm47	100	82.908	Stegastes_partitus
ENSTGUG00000008705	RBM47	100	90.404	ENSSSCG00000008796	RBM47	100	90.236	Sus_scrofa
ENSTGUG00000008705	RBM47	100	77.052	ENSTRUG00000014050	rbm47	100	76.047	Takifugu_rubripes
ENSTGUG00000008705	RBM47	100	76.557	ENSTNIG00000006127	rbm47	100	75.574	Tetraodon_nigroviridis
ENSTGUG00000008705	RBM47	77	84.840	ENSTBEG00000001607	RBM47	76	85.638	Tupaia_belangeri
ENSTGUG00000008705	RBM47	100	89.899	ENSTTRG00000002839	RBM47	100	90.067	Tursiops_truncatus
ENSTGUG00000008705	RBM47	100	90.268	ENSUAMG00000021346	RBM47	100	90.268	Ursus_americanus
ENSTGUG00000008705	RBM47	57	88.482	ENSVPAG00000000641	-	57	88.356	Vicugna_pacos
ENSTGUG00000008705	RBM47	96	90.035	ENSVVUG00000014774	RBM47	100	88.591	Vulpes_vulpes
ENSTGUG00000008705	RBM47	100	86.074	ENSXETG00000012802	rbm47	100	86.242	Xenopus_tropicalis
ENSTGUG00000008705	RBM47	88	83.777	ENSXCOG00000000780	rbm47	100	83.777	Xiphophorus_couchianus
ENSTGUG00000008705	RBM47	100	78.392	ENSXMAG00000009874	rbm47	100	81.633	Xiphophorus_maculatus