EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000009068 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 9919 bases
Position: chr9:14521341-14531259
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000009359	MMR_HSR1	PF01926.23	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000009458	LSG1-201	1788	-	ENSTGUP00000009359	595 (aa)	-	H0ZFJ7

Gene Model

Click here to download ENSTGUG00000009068's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000009068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000009068	LSG1	99	63.953	ENSG00000041802	LSG1	89	63.953	Homo_sapiens
ENSTGUG00000009068	LSG1	100	61.360	ENSAPOG00000009694	lsg1	89	61.692	Acanthochromis_polyacanthus
ENSTGUG00000009068	LSG1	100	64.489	ENSAMEG00000009343	LSG1	89	64.489	Ailuropoda_melanoleuca
ENSTGUG00000009068	LSG1	100	60.826	ENSACIG00000012406	lsg1	88	60.570	Amphilophus_citrinellus
ENSTGUG00000009068	LSG1	100	61.194	ENSAOCG00000016066	lsg1	89	61.386	Amphiprion_ocellaris
ENSTGUG00000009068	LSG1	100	60.862	ENSAPEG00000003252	lsg1	89	60.891	Amphiprion_percula
ENSTGUG00000009068	LSG1	100	61.474	ENSATEG00000011794	lsg1	88	60.496	Anabas_testudineus
ENSTGUG00000009068	LSG1	99	62.211	ENSACAG00000004222	LSG1	93	61.881	Anolis_carolinensis
ENSTGUG00000009068	LSG1	99	64.034	ENSANAG00000021153	LSG1	89	64.538	Aotus_nancymaae
ENSTGUG00000009068	LSG1	100	60.164	ENSACLG00000000520	lsg1	89	60.927	Astatotilapia_calliptera
ENSTGUG00000009068	LSG1	100	59.866	ENSAMXG00000008271	lsg1	89	59.967	Astyanax_mexicanus
ENSTGUG00000009068	LSG1	99	64.262	ENSBTAG00000008461	LSG1	89	64.430	Bos_taurus
ENSTGUG00000009068	LSG1	70	50.292	WBGene00016907	C53H9.2	83	50.292	Caenorhabditis_elegans
ENSTGUG00000009068	LSG1	99	63.697	ENSCJAG00000013962	LSG1	89	64.202	Callithrix_jacchus
ENSTGUG00000009068	LSG1	100	62.396	ENSCAFG00000013445	LSG1	94	63.423	Canis_familiaris
ENSTGUG00000009068	LSG1	100	62.833	ENSCAFG00020002216	LSG1	94	63.926	Canis_lupus_dingo
ENSTGUG00000009068	LSG1	100	65.159	ENSCHIG00000015769	LSG1	89	65.159	Capra_hircus
ENSTGUG00000009068	LSG1	99	63.866	ENSTSYG00000001447	LSG1	89	64.706	Carlito_syrichta
ENSTGUG00000009068	LSG1	99	61.873	ENSCAPG00000009856	LSG1	93	61.409	Cavia_aperea
ENSTGUG00000009068	LSG1	99	62.604	ENSCCAG00000035744	LSG1	89	63.025	Cebus_capucinus
ENSTGUG00000009068	LSG1	99	64.202	ENSCATG00000042060	LSG1	89	62.857	Cercocebus_atys
ENSTGUG00000009068	LSG1	99	63.866	ENSCSAG00000008796	LSG1	81	64.370	Chlorocebus_sabaeus
ENSTGUG00000009068	LSG1	99	71.886	ENSCPBG00000015941	LSG1	74	71.044	Chrysemys_picta_bellii
ENSTGUG00000009068	LSG1	68	58.128	ENSCING00000007079	-	85	58.128	Ciona_intestinalis
ENSTGUG00000009068	LSG1	65	58.333	ENSCSAVG00000002514	-	76	57.488	Ciona_savignyi
ENSTGUG00000009068	LSG1	99	64.034	ENSCANG00000030709	LSG1	89	64.538	Colobus_angolensis_palliatus
ENSTGUG00000009068	LSG1	99	64.094	ENSCGRG00001019846	Lsg1	89	65.101	Cricetulus_griseus_chok1gshd
ENSTGUG00000009068	LSG1	99	64.094	ENSCGRG00000014617	Lsg1	89	65.101	Cricetulus_griseus_crigri
ENSTGUG00000009068	LSG1	100	59.774	ENSCSEG00000008522	lsg1	88	59.641	Cynoglossus_semilaevis
ENSTGUG00000009068	LSG1	100	61.809	ENSCVAG00000002484	lsg1	88	61.833	Cyprinodon_variegatus
ENSTGUG00000009068	LSG1	100	61.642	ENSDARG00000015352	lsg1	88	61.642	Danio_rerio
ENSTGUG00000009068	LSG1	99	63.682	ENSDNOG00000006224	LSG1	89	63.149	Dasypus_novemcinctus
ENSTGUG00000009068	LSG1	79	58.683	FBgn0266284	Ns3	79	56.667	Drosophila_melanogaster
ENSTGUG00000009068	LSG1	87	58.767	ENSETEG00000003888	LSG1	78	59.125	Echinops_telfairi
ENSTGUG00000009068	LSG1	99	54.333	ENSEBUG00000003119	lsg1	85	53.974	Eptatretus_burgeri
ENSTGUG00000009068	LSG1	99	65.210	ENSEASG00005000678	LSG1	89	66.050	Equus_asinus_asinus
ENSTGUG00000009068	LSG1	99	65.546	ENSECAG00000017659	LSG1	89	66.387	Equus_caballus
ENSTGUG00000009068	LSG1	84	62.393	ENSEEUG00000015217	LSG1	75	62.393	Erinaceus_europaeus
ENSTGUG00000009068	LSG1	100	60.833	ENSELUG00000023973	lsg1	89	60.500	Esox_lucius
ENSTGUG00000009068	LSG1	100	64.597	ENSFCAG00000024957	LSG1	89	65.436	Felis_catus
ENSTGUG00000009068	LSG1	100	92.114	ENSFALG00000007210	LSG1	90	92.114	Ficedula_albicollis
ENSTGUG00000009068	LSG1	99	62.689	ENSFDAG00000017373	LSG1	88	63.193	Fukomys_damarensis
ENSTGUG00000009068	LSG1	100	60.231	ENSFHEG00000003680	lsg1	88	60.667	Fundulus_heteroclitus
ENSTGUG00000009068	LSG1	83	67.857	ENSGMOG00000015834	lsg1	79	67.857	Gadus_morhua
ENSTGUG00000009068	LSG1	99	85.378	ENSGALG00000007058	LSG1	79	85.378	Gallus_gallus
ENSTGUG00000009068	LSG1	100	60.267	ENSGAFG00000015831	lsg1	88	60.267	Gambusia_affinis
ENSTGUG00000009068	LSG1	100	60.099	ENSGACG00000009323	lsg1	88	59.603	Gasterosteus_aculeatus
ENSTGUG00000009068	LSG1	99	64.120	ENSGGOG00000000520	LSG1	89	64.120	Gorilla_gorilla
ENSTGUG00000009068	LSG1	100	60.631	ENSHBUG00000005659	lsg1	89	61.409	Haplochromis_burtoni
ENSTGUG00000009068	LSG1	99	61.398	ENSHGLG00000017390	LSG1	88	60.596	Heterocephalus_glaber_female
ENSTGUG00000009068	LSG1	99	61.398	ENSHGLG00100018587	LSG1	88	60.596	Heterocephalus_glaber_male
ENSTGUG00000009068	LSG1	100	59.339	ENSHCOG00000016848	lsg1	88	57.680	Hippocampus_comes
ENSTGUG00000009068	LSG1	99	60.943	ENSIPUG00000008631	lsg1	88	60.100	Ictalurus_punctatus
ENSTGUG00000009068	LSG1	86	62.115	ENSSTOG00000010234	LSG1	92	63.529	Ictidomys_tridecemlineatus
ENSTGUG00000009068	LSG1	99	62.993	ENSJJAG00000015513	Lsg1	89	62.480	Jaculus_jaculus
ENSTGUG00000009068	LSG1	100	60.500	ENSKMAG00000009681	lsg1	88	60.000	Kryptolebias_marmoratus
ENSTGUG00000009068	LSG1	100	59.496	ENSLBEG00000024261	lsg1	88	59.832	Labrus_bergylta
ENSTGUG00000009068	LSG1	100	64.851	ENSLACG00000013399	LSG1	89	64.793	Latimeria_chalumnae
ENSTGUG00000009068	LSG1	100	62.104	ENSLOCG00000004918	lsg1	89	61.614	Lepisosteus_oculatus
ENSTGUG00000009068	LSG1	99	64.500	ENSLAFG00000012919	-	89	64.500	Loxodonta_africana
ENSTGUG00000009068	LSG1	99	64.034	ENSMFAG00000039903	LSG1	89	62.689	Macaca_fascicularis
ENSTGUG00000009068	LSG1	99	64.034	ENSMMUG00000010708	LSG1	89	64.538	Macaca_mulatta
ENSTGUG00000009068	LSG1	99	64.034	ENSMNEG00000031538	LSG1	89	62.521	Macaca_nemestrina
ENSTGUG00000009068	LSG1	99	64.034	ENSMLEG00000041184	LSG1	89	64.538	Mandrillus_leucophaeus
ENSTGUG00000009068	LSG1	100	59.468	ENSMAMG00000000470	lsg1	89	59.302	Mastacembelus_armatus
ENSTGUG00000009068	LSG1	100	60.465	ENSMZEG00005017865	lsg1	89	61.242	Maylandia_zebra
ENSTGUG00000009068	LSG1	99	84.848	ENSMGAG00000007050	LSG1	99	84.848	Meleagris_gallopavo
ENSTGUG00000009068	LSG1	96	59.760	ENSMAUG00000016976	Lsg1	87	60.172	Mesocricetus_auratus
ENSTGUG00000009068	LSG1	99	63.712	ENSMICG00000049087	LSG1	89	64.775	Microcebus_murinus
ENSTGUG00000009068	LSG1	99	62.230	ENSMOCG00000022136	Lsg1	88	62.876	Microtus_ochrogaster
ENSTGUG00000009068	LSG1	82	70.261	ENSMMOG00000008884	lsg1	87	70.261	Mola_mola
ENSTGUG00000009068	LSG1	100	56.250	ENSMODG00000019828	LSG1	89	55.428	Monodelphis_domestica
ENSTGUG00000009068	LSG1	100	64.262	MGP_CAROLIEiJ_G0020648	Lsg1	89	64.597	Mus_caroli
ENSTGUG00000009068	LSG1	100	64.597	ENSMUSG00000022538	Lsg1	89	64.765	Mus_musculus
ENSTGUG00000009068	LSG1	100	65.268	MGP_PahariEiJ_G0016352	Lsg1	89	65.436	Mus_pahari
ENSTGUG00000009068	LSG1	100	65.101	MGP_SPRETEiJ_G0021544	Lsg1	89	65.101	Mus_spretus
ENSTGUG00000009068	LSG1	100	62.752	ENSMPUG00000003734	LSG1	89	63.591	Mustela_putorius_furo
ENSTGUG00000009068	LSG1	100	65.436	ENSMLUG00000012548	LSG1	89	66.275	Myotis_lucifugus
ENSTGUG00000009068	LSG1	99	63.025	ENSNGAG00000021872	Lsg1	88	62.521	Nannospalax_galili
ENSTGUG00000009068	LSG1	99	65.042	ENSNLEG00000008293	LSG1	89	65.546	Nomascus_leucogenys
ENSTGUG00000009068	LSG1	78	65.041	ENSMEUG00000009041	-	82	66.193	Notamacropus_eugenii
ENSTGUG00000009068	LSG1	100	61.913	ENSONIG00000002635	lsg1	89	62.248	Oreochromis_niloticus
ENSTGUG00000009068	LSG1	100	66.722	ENSOANG00000012742	LSG1	93	66.221	Ornithorhynchus_anatinus
ENSTGUG00000009068	LSG1	99	64.538	ENSOCUG00000004817	LSG1	89	65.042	Oryctolagus_cuniculus
ENSTGUG00000009068	LSG1	100	59.899	ENSORLG00000007695	lsg1	88	59.667	Oryzias_latipes
ENSTGUG00000009068	LSG1	100	59.966	ENSORLG00020016286	lsg1	88	59.631	Oryzias_latipes_hni
ENSTGUG00000009068	LSG1	100	59.732	ENSORLG00015012025	lsg1	88	59.564	Oryzias_latipes_hsok
ENSTGUG00000009068	LSG1	100	60.302	ENSOMEG00000022379	lsg1	88	60.100	Oryzias_melastigma
ENSTGUG00000009068	LSG1	99	63.272	ENSOGAG00000003475	LSG1	88	64.214	Otolemur_garnettii
ENSTGUG00000009068	LSG1	100	64.824	ENSOARG00000020403	LSG1	89	65.159	Ovis_aries
ENSTGUG00000009068	LSG1	99	64.120	ENSPPAG00000029271	LSG1	89	64.120	Pan_paniscus
ENSTGUG00000009068	LSG1	100	65.159	ENSPPRG00000010281	LSG1	89	65.159	Panthera_pardus
ENSTGUG00000009068	LSG1	100	64.657	ENSPTIG00000010789	LSG1	89	65.494	Panthera_tigris_altaica
ENSTGUG00000009068	LSG1	99	63.953	ENSPTRG00000015760	LSG1	89	63.953	Pan_troglodytes
ENSTGUG00000009068	LSG1	99	64.034	ENSPANG00000018249	LSG1	89	62.521	Papio_anubis
ENSTGUG00000009068	LSG1	99	59.365	ENSPKIG00000002895	lsg1	89	58.794	Paramormyrops_kingsleyae
ENSTGUG00000009068	LSG1	97	69.707	ENSPSIG00000009821	LSG1	89	68.158	Pelodiscus_sinensis
ENSTGUG00000009068	LSG1	99	62.270	ENSPMGG00000000931	lsg1	93	61.770	Periophthalmus_magnuspinnatus
ENSTGUG00000009068	LSG1	99	64.842	ENSPEMG00000012082	-	89	64.393	Peromyscus_maniculatus_bairdii
ENSTGUG00000009068	LSG1	99	58.949	ENSPMAG00000007451	lsg1	89	58.007	Petromyzon_marinus
ENSTGUG00000009068	LSG1	99	67.027	ENSPCIG00000013890	LSG1	72	67.027	Phascolarctos_cinereus
ENSTGUG00000009068	LSG1	100	61.913	ENSPFOG00000021882	lsg1	89	61.913	Poecilia_formosa
ENSTGUG00000009068	LSG1	100	60.738	ENSPLAG00000019536	lsg1	88	60.738	Poecilia_latipinna
ENSTGUG00000009068	LSG1	99	61.345	ENSPMEG00000017281	lsg1	88	61.345	Poecilia_mexicana
ENSTGUG00000009068	LSG1	100	50.328	ENSPREG00000006048	lsg1	88	49.755	Poecilia_reticulata
ENSTGUG00000009068	LSG1	91	63.043	ENSPPYG00000014425	LSG1	88	62.385	Pongo_abelii
ENSTGUG00000009068	LSG1	88	53.604	ENSPCAG00000005511	LSG1	78	53.445	Procavia_capensis
ENSTGUG00000009068	LSG1	99	64.107	ENSPCOG00000012360	LSG1	89	63.773	Propithecus_coquereli
ENSTGUG00000009068	LSG1	100	60.427	ENSPNYG00000021994	lsg1	89	61.093	Pundamilia_nyererei
ENSTGUG00000009068	LSG1	100	60.956	ENSPNAG00000015533	lsg1	89	60.661	Pygocentrus_nattereri
ENSTGUG00000009068	LSG1	100	63.115	ENSRNOG00000001727	Lsg1	89	65.391	Rattus_norvegicus
ENSTGUG00000009068	LSG1	99	63.621	ENSRBIG00000029053	LSG1	89	63.621	Rhinopithecus_bieti
ENSTGUG00000009068	LSG1	99	63.621	ENSRROG00000037702	LSG1	89	63.621	Rhinopithecus_roxellana
ENSTGUG00000009068	LSG1	58	53.086	YGL099W	LSG1	53	53.086	Saccharomyces_cerevisiae
ENSTGUG00000009068	LSG1	99	63.866	ENSSBOG00000034938	LSG1	89	64.370	Saimiri_boliviensis_boliviensis
ENSTGUG00000009068	LSG1	88	63.925	ENSSHAG00000003487	LSG1	99	62.177	Sarcophilus_harrisii
ENSTGUG00000009068	LSG1	99	62.167	ENSSFOG00015008955	lsg1	88	61.706	Scleropages_formosus
ENSTGUG00000009068	LSG1	100	61.167	ENSSDUG00000004622	lsg1	89	60.033	Seriola_dumerili
ENSTGUG00000009068	LSG1	100	61.513	ENSSLDG00000010869	lsg1	88	61.345	Seriola_lalandi_dorsalis
ENSTGUG00000009068	LSG1	78	69.298	ENSSARG00000012981	LSG1	69	69.298	Sorex_araneus
ENSTGUG00000009068	LSG1	100	69.000	ENSSPUG00000016347	LSG1	89	67.715	Sphenodon_punctatus
ENSTGUG00000009068	LSG1	100	60.601	ENSSPAG00000005508	lsg1	89	61.500	Stegastes_partitus
ENSTGUG00000009068	LSG1	100	63.211	ENSSSCG00000011827	LSG1	89	63.211	Sus_scrofa
ENSTGUG00000009068	LSG1	100	57.213	ENSTRUG00000017380	lsg1	88	56.956	Takifugu_rubripes
ENSTGUG00000009068	LSG1	100	61.307	ENSTNIG00000015570	lsg1	88	61.474	Tetraodon_nigroviridis
ENSTGUG00000009068	LSG1	90	66.180	ENSTTRG00000000559	LSG1	80	65.136	Tursiops_truncatus
ENSTGUG00000009068	LSG1	100	64.500	ENSUAMG00000012454	LSG1	89	64.500	Ursus_americanus
ENSTGUG00000009068	LSG1	100	64.500	ENSUMAG00000000855	LSG1	89	64.500	Ursus_maritimus
ENSTGUG00000009068	LSG1	100	60.797	ENSVPAG00000012400	LSG1	94	60.133	Vicugna_pacos
ENSTGUG00000009068	LSG1	100	62.000	ENSVVUG00000008956	LSG1	91	63.087	Vulpes_vulpes
ENSTGUG00000009068	LSG1	100	63.819	ENSXETG00000003451	lsg1	89	63.819	Xenopus_tropicalis
ENSTGUG00000009068	LSG1	100	60.233	ENSXCOG00000003239	lsg1	88	59.835	Xiphophorus_couchianus
ENSTGUG00000009068	LSG1	100	60.000	ENSXMAG00000005536	lsg1	89	60.097	Xiphophorus_maculatus