EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000009692 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 2164 bases
Position: chr6:21529828-21531991
Accession: 100221784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000009999	EXOSC1	PF10447.9	3.2e-14	1	1
ENSTGUP00000009999	ECR1_N	PF14382.6	9.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000010106	EXOSC1-201	867	XM_012574559	ENSTGUP00000009999	194 (aa)	XP_012430013	H0ZHD4

Gene Model

Click here to download ENSTGUG00000009692's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000009692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000009692	EXOSC1	99	81.250	ENSG00000171311	EXOSC1	98	81.250	Homo_sapiens
ENSTGUG00000009692	EXOSC1	98	78.010	ENSAPOG00000007822	exosc1	98	78.010	Acanthochromis_polyacanthus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSAMEG00000000129	EXOSC1	98	81.250	Ailuropoda_melanoleuca
ENSTGUG00000009692	EXOSC1	95	77.838	ENSACIG00000018956	exosc1	91	77.838	Amphilophus_citrinellus
ENSTGUG00000009692	EXOSC1	98	78.010	ENSAOCG00000010699	exosc1	98	78.010	Amphiprion_ocellaris
ENSTGUG00000009692	EXOSC1	92	69.274	ENSAPEG00000012690	exosc1	96	69.274	Amphiprion_percula
ENSTGUG00000009692	EXOSC1	98	77.487	ENSATEG00000018683	exosc1	98	77.487	Anabas_testudineus
ENSTGUG00000009692	EXOSC1	97	85.106	ENSACAG00000002101	EXOSC1	96	85.106	Anolis_carolinensis
ENSTGUG00000009692	EXOSC1	99	81.771	ENSANAG00000034669	EXOSC1	98	81.771	Aotus_nancymaae
ENSTGUG00000009692	EXOSC1	98	77.487	ENSACLG00000021243	exosc1	98	77.487	Astatotilapia_calliptera
ENSTGUG00000009692	EXOSC1	98	79.581	ENSAMXG00000011116	exosc1	98	79.581	Astyanax_mexicanus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSBTAG00000012699	EXOSC1	98	81.250	Bos_taurus
ENSTGUG00000009692	EXOSC1	92	36.559	WBGene00012966	exos-1	89	36.559	Caenorhabditis_elegans
ENSTGUG00000009692	EXOSC1	99	82.292	ENSCJAG00000016586	EXOSC1	98	82.292	Callithrix_jacchus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSCAFG00000009068	EXOSC1	93	80.729	Canis_familiaris
ENSTGUG00000009692	EXOSC1	99	80.729	ENSCAFG00020006002	EXOSC1	93	80.729	Canis_lupus_dingo
ENSTGUG00000009692	EXOSC1	99	81.250	ENSCHIG00000015253	EXOSC1	98	81.250	Capra_hircus
ENSTGUG00000009692	EXOSC1	99	81.771	ENSTSYG00000000760	EXOSC1	98	81.771	Carlito_syrichta
ENSTGUG00000009692	EXOSC1	99	81.771	ENSCPOG00000001173	EXOSC1	98	81.771	Cavia_porcellus
ENSTGUG00000009692	EXOSC1	99	45.876	ENSCCAG00000023986	EXOSC1	98	45.876	Cebus_capucinus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSCATG00000034114	EXOSC1	98	81.250	Cercocebus_atys
ENSTGUG00000009692	EXOSC1	99	81.771	ENSCLAG00000002463	EXOSC1	98	81.771	Chinchilla_lanigera
ENSTGUG00000009692	EXOSC1	99	80.729	ENSCSAG00000005870	EXOSC1	98	80.729	Chlorocebus_sabaeus
ENSTGUG00000009692	EXOSC1	95	70.652	ENSCHOG00000006477	EXOSC1	98	70.652	Choloepus_hoffmanni
ENSTGUG00000009692	EXOSC1	55	80.189	ENSCPBG00000011949	EXOSC1	88	80.189	Chrysemys_picta_bellii
ENSTGUG00000009692	EXOSC1	97	52.381	ENSCING00000022734	-	90	52.381	Ciona_intestinalis
ENSTGUG00000009692	EXOSC1	96	55.615	ENSCSAVG00000010865	-	95	55.615	Ciona_savignyi
ENSTGUG00000009692	EXOSC1	99	81.250	ENSCANG00000034159	EXOSC1	98	81.250	Colobus_angolensis_palliatus
ENSTGUG00000009692	EXOSC1	99	82.812	ENSCGRG00001000335	Exosc1	98	82.812	Cricetulus_griseus_chok1gshd
ENSTGUG00000009692	EXOSC1	99	82.812	ENSCGRG00000011602	Exosc1	98	82.812	Cricetulus_griseus_crigri
ENSTGUG00000009692	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSTGUG00000009692	EXOSC1	98	73.298	ENSCVAG00000016748	exosc1	98	73.298	Cyprinodon_variegatus
ENSTGUG00000009692	EXOSC1	98	79.058	ENSDARG00000059841	exosc1	98	79.058	Danio_rerio
ENSTGUG00000009692	EXOSC1	74	78.621	ENSDNOG00000007983	EXOSC1	98	78.621	Dasypus_novemcinctus
ENSTGUG00000009692	EXOSC1	99	81.771	ENSDORG00000016528	Exosc1	98	81.771	Dipodomys_ordii
ENSTGUG00000009692	EXOSC1	95	46.032	FBgn0032346	Csl4	92	46.032	Drosophila_melanogaster
ENSTGUG00000009692	EXOSC1	99	82.812	ENSETEG00000002469	-	98	82.812	Echinops_telfairi
ENSTGUG00000009692	EXOSC1	97	65.445	ENSEBUG00000008164	exosc1	96	65.445	Eptatretus_burgeri
ENSTGUG00000009692	EXOSC1	99	75.000	ENSEASG00005008684	EXOSC1	98	75.000	Equus_asinus_asinus
ENSTGUG00000009692	EXOSC1	60	62.069	ENSECAG00000010621	EXOSC1	69	62.069	Equus_caballus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSEEUG00000005647	EXOSC1	98	80.729	Erinaceus_europaeus
ENSTGUG00000009692	EXOSC1	98	76.410	ENSELUG00000017369	exosc1	86	76.410	Esox_lucius
ENSTGUG00000009692	EXOSC1	99	81.250	ENSFCAG00000040563	EXOSC1	93	81.250	Felis_catus
ENSTGUG00000009692	EXOSC1	99	96.875	ENSFALG00000008450	EXOSC1	98	96.875	Ficedula_albicollis
ENSTGUG00000009692	EXOSC1	99	82.292	ENSFDAG00000000846	EXOSC1	98	82.292	Fukomys_damarensis
ENSTGUG00000009692	EXOSC1	98	73.298	ENSFHEG00000009154	exosc1	98	73.298	Fundulus_heteroclitus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSGMOG00000008993	exosc1	98	77.487	Gadus_morhua
ENSTGUG00000009692	EXOSC1	99	77.083	ENSGALG00000039917	EXOSC1	100	93.836	Gallus_gallus
ENSTGUG00000009692	EXOSC1	98	73.298	ENSGAFG00000010265	exosc1	94	73.298	Gambusia_affinis
ENSTGUG00000009692	EXOSC1	98	76.963	ENSGACG00000018936	exosc1	98	76.963	Gasterosteus_aculeatus
ENSTGUG00000009692	EXOSC1	99	83.333	ENSGAGG00000019192	EXOSC1	98	83.333	Gopherus_agassizii
ENSTGUG00000009692	EXOSC1	99	71.875	ENSGGOG00000003099	EXOSC1	98	71.875	Gorilla_gorilla
ENSTGUG00000009692	EXOSC1	98	77.487	ENSHBUG00000017857	exosc1	99	76.963	Haplochromis_burtoni
ENSTGUG00000009692	EXOSC1	99	81.771	ENSHGLG00000016927	EXOSC1	98	81.771	Heterocephalus_glaber_female
ENSTGUG00000009692	EXOSC1	99	81.771	ENSHGLG00100012208	EXOSC1	98	81.771	Heterocephalus_glaber_male
ENSTGUG00000009692	EXOSC1	98	75.916	ENSHCOG00000019882	exosc1	98	75.916	Hippocampus_comes
ENSTGUG00000009692	EXOSC1	98	79.058	ENSIPUG00000007685	exosc1	98	79.058	Ictalurus_punctatus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSSTOG00000006615	EXOSC1	98	81.250	Ictidomys_tridecemlineatus
ENSTGUG00000009692	EXOSC1	61	64.706	ENSSTOG00000029860	-	91	64.706	Ictidomys_tridecemlineatus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSJJAG00000013311	Exosc1	98	80.729	Jaculus_jaculus
ENSTGUG00000009692	EXOSC1	98	73.822	ENSKMAG00000001202	exosc1	81	73.822	Kryptolebias_marmoratus
ENSTGUG00000009692	EXOSC1	98	78.010	ENSLBEG00000011448	exosc1	98	78.010	Labrus_bergylta
ENSTGUG00000009692	EXOSC1	98	59.391	ENSLOCG00000003776	exosc1	98	59.391	Lepisosteus_oculatus
ENSTGUG00000009692	EXOSC1	99	82.812	ENSLAFG00000015983	EXOSC1	98	82.812	Loxodonta_africana
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMFAG00000001493	EXOSC1	98	81.250	Macaca_fascicularis
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMMUG00000020028	EXOSC1	98	75.000	Macaca_mulatta
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMNEG00000029816	EXOSC1	98	81.250	Macaca_nemestrina
ENSTGUG00000009692	EXOSC1	99	76.042	ENSMLEG00000027643	EXOSC1	98	76.042	Mandrillus_leucophaeus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSMAMG00000012200	exosc1	98	77.487	Mastacembelus_armatus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSMZEG00005007042	exosc1	98	77.487	Maylandia_zebra
ENSTGUG00000009692	EXOSC1	99	73.438	ENSMAUG00000020462	-	98	73.438	Mesocricetus_auratus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMICG00000007664	EXOSC1	91	81.250	Microcebus_murinus
ENSTGUG00000009692	EXOSC1	95	79.891	ENSMOCG00000017124	-	94	79.891	Microtus_ochrogaster
ENSTGUG00000009692	EXOSC1	99	82.812	ENSMOCG00000006004	-	98	82.812	Microtus_ochrogaster
ENSTGUG00000009692	EXOSC1	94	58.791	ENSMMOG00000021403	exosc1	94	58.791	Mola_mola
ENSTGUG00000009692	EXOSC1	99	82.902	ENSMODG00000004213	EXOSC1	98	82.902	Monodelphis_domestica
ENSTGUG00000009692	EXOSC1	97	77.778	ENSMALG00000007061	exosc1	95	77.778	Monopterus_albus
ENSTGUG00000009692	EXOSC1	99	82.292	MGP_CAROLIEiJ_G0022959	Exosc1	98	82.292	Mus_caroli
ENSTGUG00000009692	EXOSC1	99	82.292	ENSMUSG00000034321	Exosc1	98	82.292	Mus_musculus
ENSTGUG00000009692	EXOSC1	99	82.812	MGP_PahariEiJ_G0014449	Exosc1	98	82.812	Mus_pahari
ENSTGUG00000009692	EXOSC1	99	82.292	MGP_SPRETEiJ_G0023880	Exosc1	98	82.292	Mus_spretus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMPUG00000017044	EXOSC1	98	81.250	Mustela_putorius_furo
ENSTGUG00000009692	EXOSC1	99	81.250	ENSMLUG00000009228	EXOSC1	98	81.250	Myotis_lucifugus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSNGAG00000022033	Exosc1	98	81.250	Nannospalax_galili
ENSTGUG00000009692	EXOSC1	98	58.639	ENSNBRG00000024007	exosc1	97	58.639	Neolamprologus_brichardi
ENSTGUG00000009692	EXOSC1	99	80.729	ENSNLEG00000013872	EXOSC1	98	80.729	Nomascus_leucogenys
ENSTGUG00000009692	EXOSC1	58	75.000	ENSMEUG00000002246	EXOSC1	97	75.000	Notamacropus_eugenii
ENSTGUG00000009692	EXOSC1	99	82.812	ENSOPRG00000005065	EXOSC1	98	82.812	Ochotona_princeps
ENSTGUG00000009692	EXOSC1	99	82.292	ENSODEG00000016709	EXOSC1	98	82.292	Octodon_degus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSONIG00000017683	exosc1	98	77.487	Oreochromis_niloticus
ENSTGUG00000009692	EXOSC1	59	87.826	ENSOANG00000006563	EXOSC1	98	85.484	Ornithorhynchus_anatinus
ENSTGUG00000009692	EXOSC1	99	80.829	ENSOCUG00000011898	-	98	80.829	Oryctolagus_cuniculus
ENSTGUG00000009692	EXOSC1	99	76.042	ENSOCUG00000026461	-	98	76.042	Oryctolagus_cuniculus
ENSTGUG00000009692	EXOSC1	98	74.479	ENSORLG00000011595	exosc1	98	74.479	Oryzias_latipes
ENSTGUG00000009692	EXOSC1	98	74.479	ENSORLG00020005831	exosc1	98	74.479	Oryzias_latipes_hni
ENSTGUG00000009692	EXOSC1	98	74.479	ENSORLG00015004317	exosc1	98	74.479	Oryzias_latipes_hsok
ENSTGUG00000009692	EXOSC1	98	61.257	ENSOMEG00000013907	exosc1	98	61.257	Oryzias_melastigma
ENSTGUG00000009692	EXOSC1	99	80.729	ENSOGAG00000016259	EXOSC1	98	80.729	Otolemur_garnettii
ENSTGUG00000009692	EXOSC1	99	80.729	ENSOARG00000010136	EXOSC1	98	80.729	Ovis_aries
ENSTGUG00000009692	EXOSC1	99	75.897	ENSPPAG00000039842	EXOSC1	98	75.897	Pan_paniscus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSPPRG00000023366	EXOSC1	98	81.250	Panthera_pardus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSPTIG00000017701	EXOSC1	98	81.250	Panthera_tigris_altaica
ENSTGUG00000009692	EXOSC1	99	81.250	ENSPTRG00000002808	EXOSC1	98	81.250	Pan_troglodytes
ENSTGUG00000009692	EXOSC1	99	81.250	ENSPANG00000021324	EXOSC1	98	81.250	Papio_anubis
ENSTGUG00000009692	EXOSC1	98	79.058	ENSPKIG00000016037	exosc1	98	79.058	Paramormyrops_kingsleyae
ENSTGUG00000009692	EXOSC1	76	83.673	ENSPSIG00000013571	EXOSC1	98	82.787	Pelodiscus_sinensis
ENSTGUG00000009692	EXOSC1	98	67.016	ENSPMGG00000014002	exosc1	98	67.016	Periophthalmus_magnuspinnatus
ENSTGUG00000009692	EXOSC1	99	82.812	ENSPEMG00000010710	-	98	82.812	Peromyscus_maniculatus_bairdii
ENSTGUG00000009692	EXOSC1	97	68.063	ENSPMAG00000000195	exosc1	97	68.063	Petromyzon_marinus
ENSTGUG00000009692	EXOSC1	99	81.771	ENSPCIG00000002210	EXOSC1	97	81.771	Phascolarctos_cinereus
ENSTGUG00000009692	EXOSC1	98	73.298	ENSPFOG00000006755	exosc1	94	73.298	Poecilia_formosa
ENSTGUG00000009692	EXOSC1	98	73.298	ENSPLAG00000005880	exosc1	98	73.298	Poecilia_latipinna
ENSTGUG00000009692	EXOSC1	98	73.298	ENSPMEG00000015598	exosc1	94	73.298	Poecilia_mexicana
ENSTGUG00000009692	EXOSC1	98	64.398	ENSPREG00000000405	exosc1	93	64.398	Poecilia_reticulata
ENSTGUG00000009692	EXOSC1	99	80.729	ENSPPYG00000002531	EXOSC1	98	80.729	Pongo_abelii
ENSTGUG00000009692	EXOSC1	99	81.771	ENSPCAG00000009135	EXOSC1	98	81.771	Procavia_capensis
ENSTGUG00000009692	EXOSC1	99	75.521	ENSPCOG00000027539	EXOSC1	98	75.521	Propithecus_coquereli
ENSTGUG00000009692	EXOSC1	99	81.250	ENSPVAG00000003372	EXOSC1	98	81.250	Pteropus_vampyrus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSPNYG00000021745	exosc1	98	77.487	Pundamilia_nyererei
ENSTGUG00000009692	EXOSC1	98	78.534	ENSPNAG00000001944	exosc1	98	78.534	Pygocentrus_nattereri
ENSTGUG00000009692	EXOSC1	99	82.812	ENSRNOG00000048708	Exosc1	98	82.812	Rattus_norvegicus
ENSTGUG00000009692	EXOSC1	99	81.250	ENSRBIG00000035618	EXOSC1	98	81.250	Rhinopithecus_bieti
ENSTGUG00000009692	EXOSC1	99	81.250	ENSRROG00000032589	EXOSC1	91	81.250	Rhinopithecus_roxellana
ENSTGUG00000009692	EXOSC1	99	81.771	ENSSBOG00000000359	EXOSC1	98	81.771	Saimiri_boliviensis_boliviensis
ENSTGUG00000009692	EXOSC1	75	87.755	ENSSHAG00000018219	EXOSC1	100	87.755	Sarcophilus_harrisii
ENSTGUG00000009692	EXOSC1	98	75.263	ENSSFOG00015016289	-	98	75.263	Scleropages_formosus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSSFOG00015009069	exosc1	98	77.487	Scleropages_formosus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSSMAG00000003721	exosc1	98	77.487	Scophthalmus_maximus
ENSTGUG00000009692	EXOSC1	98	77.487	ENSSDUG00000002993	exosc1	98	77.487	Seriola_dumerili
ENSTGUG00000009692	EXOSC1	98	77.487	ENSSLDG00000025181	exosc1	98	77.487	Seriola_lalandi_dorsalis
ENSTGUG00000009692	EXOSC1	99	71.875	ENSSARG00000000162	EXOSC1	98	71.875	Sorex_araneus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSSPUG00000012263	EXOSC1	98	80.729	Sphenodon_punctatus
ENSTGUG00000009692	EXOSC1	98	70.157	ENSSPAG00000016792	exosc1	82	70.157	Stegastes_partitus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSSSCG00000010518	EXOSC1	90	80.729	Sus_scrofa
ENSTGUG00000009692	EXOSC1	96	70.053	ENSTRUG00000007706	exosc1	97	70.053	Takifugu_rubripes
ENSTGUG00000009692	EXOSC1	96	70.526	ENSTNIG00000014079	exosc1	96	70.526	Tetraodon_nigroviridis
ENSTGUG00000009692	EXOSC1	99	76.562	ENSTBEG00000006011	EXOSC1	98	76.562	Tupaia_belangeri
ENSTGUG00000009692	EXOSC1	95	83.152	ENSTTRG00000009887	EXOSC1	100	83.152	Tursiops_truncatus
ENSTGUG00000009692	EXOSC1	99	65.625	ENSUAMG00000010266	EXOSC1	98	65.625	Ursus_americanus
ENSTGUG00000009692	EXOSC1	99	65.625	ENSUMAG00000022002	EXOSC1	98	65.625	Ursus_maritimus
ENSTGUG00000009692	EXOSC1	99	80.729	ENSVVUG00000023192	EXOSC1	62	80.729	Vulpes_vulpes
ENSTGUG00000009692	EXOSC1	99	76.042	ENSXETG00000003434	exosc1	99	76.042	Xenopus_tropicalis
ENSTGUG00000009692	EXOSC1	62	80.833	ENSXCOG00000014499	exosc1	92	80.833	Xiphophorus_couchianus
ENSTGUG00000009692	EXOSC1	98	64.921	ENSXMAG00000023382	exosc1	93	64.921	Xiphophorus_maculatus