EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000010214 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 32161 bases
Position: chr3:44409441-44441601
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000010540	SpoU_methylase	PF00588.19	7.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000010651	TARBP1-201	3915	-	ENSTGUP00000010540	1305 (aa)	-	H0ZIX2

Gene Model

Click here to download ENSTGUG00000010214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000010214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000010214	TARBP1	100	68.931	ENSG00000059588	TARBP1	80	68.931	Homo_sapiens
ENSTGUG00000010214	TARBP1	99	45.905	ENSAPOG00000016419	si:dkey-85a20.4	80	45.905	Acanthochromis_polyacanthus
ENSTGUG00000010214	TARBP1	100	67.125	ENSAMEG00000003359	TARBP1	95	67.125	Ailuropoda_melanoleuca
ENSTGUG00000010214	TARBP1	99	45.852	ENSATEG00000020266	si:dkey-85a20.4	80	45.551	Anabas_testudineus
ENSTGUG00000010214	TARBP1	100	87.605	ENSAPLG00000007666	TARBP1	99	87.605	Anas_platyrhynchos
ENSTGUG00000010214	TARBP1	99	65.635	ENSACAG00000001142	TARBP1	81	65.635	Anolis_carolinensis
ENSTGUG00000010214	TARBP1	99	66.847	ENSANAG00000022031	TARBP1	82	66.847	Aotus_nancymaae
ENSTGUG00000010214	TARBP1	100	67.073	ENSBTAG00000004517	TARBP1	78	73.767	Bos_taurus
ENSTGUG00000010214	TARBP1	100	68.373	ENSCJAG00000018155	TARBP1	80	68.473	Callithrix_jacchus
ENSTGUG00000010214	TARBP1	100	67.202	ENSCAFG00000011533	TARBP1	92	67.202	Canis_familiaris
ENSTGUG00000010214	TARBP1	100	67.278	ENSCAFG00020027141	TARBP1	80	67.278	Canis_lupus_dingo
ENSTGUG00000010214	TARBP1	100	67.328	ENSCHIG00000011437	TARBP1	80	67.328	Capra_hircus
ENSTGUG00000010214	TARBP1	100	66.718	ENSTSYG00000010382	TARBP1	96	66.794	Carlito_syrichta
ENSTGUG00000010214	TARBP1	98	56.964	ENSCAPG00000010831	TARBP1	99	56.930	Cavia_aperea
ENSTGUG00000010214	TARBP1	100	64.329	ENSCPOG00000013995	TARBP1	82	64.329	Cavia_porcellus
ENSTGUG00000010214	TARBP1	100	68.296	ENSCCAG00000037278	TARBP1	80	68.296	Cebus_capucinus
ENSTGUG00000010214	TARBP1	100	68.043	ENSCATG00000011754	TARBP1	80	68.043	Cercocebus_atys
ENSTGUG00000010214	TARBP1	100	64.652	ENSCLAG00000003655	TARBP1	96	64.652	Chinchilla_lanigera
ENSTGUG00000010214	TARBP1	98	68.016	ENSCSAG00000010100	TARBP1	99	68.016	Chlorocebus_sabaeus
ENSTGUG00000010214	TARBP1	88	83.650	ENSCPBG00000005587	TARBP1	78	83.650	Chrysemys_picta_bellii
ENSTGUG00000010214	TARBP1	100	68.296	ENSCANG00000034343	TARBP1	96	68.296	Colobus_angolensis_palliatus
ENSTGUG00000010214	TARBP1	100	63.198	ENSCGRG00001016690	Tarbp1	82	63.198	Cricetulus_griseus_chok1gshd
ENSTGUG00000010214	TARBP1	100	63.198	ENSCGRG00000016893	Tarbp1	89	63.198	Cricetulus_griseus_crigri
ENSTGUG00000010214	TARBP1	99	41.484	ENSCSEG00000005255	si:dkey-85a20.4	80	45.752	Cynoglossus_semilaevis
ENSTGUG00000010214	TARBP1	99	44.875	ENSDARG00000079055	si:dkey-85a20.4	99	54.623	Danio_rerio
ENSTGUG00000010214	TARBP1	100	68.365	ENSDNOG00000008637	TARBP1	79	68.441	Dasypus_novemcinctus
ENSTGUG00000010214	TARBP1	99	62.135	ENSDORG00000007984	Tarbp1	100	62.289	Dipodomys_ordii
ENSTGUG00000010214	TARBP1	100	68.783	ENSEASG00005000252	TARBP1	81	68.783	Equus_asinus_asinus
ENSTGUG00000010214	TARBP1	98	73.802	ENSECAG00000023673	TARBP1	79	73.802	Equus_caballus
ENSTGUG00000010214	TARBP1	99	45.064	ENSELUG00000012193	si:dkey-85a20.4	81	45.365	Esox_lucius
ENSTGUG00000010214	TARBP1	100	64.656	ENSFCAG00000014183	TARBP1	80	64.656	Felis_catus
ENSTGUG00000010214	TARBP1	99	93.928	ENSFALG00000013565	TARBP1	99	93.946	Ficedula_albicollis
ENSTGUG00000010214	TARBP1	98	62.881	ENSFDAG00000001308	TARBP1	99	62.881	Fukomys_damarensis
ENSTGUG00000010214	TARBP1	100	39.364	ENSFHEG00000007565	si:dkey-85a20.4	70	53.782	Fundulus_heteroclitus
ENSTGUG00000010214	TARBP1	99	42.600	ENSGMOG00000004549	si:dkey-85a20.4	94	42.675	Gadus_morhua
ENSTGUG00000010214	TARBP1	100	77.464	ENSGALG00000011000	TARBP1	81	79.878	Gallus_gallus
ENSTGUG00000010214	TARBP1	100	46.009	ENSGAFG00000007387	si:dkey-85a20.4	80	46.009	Gambusia_affinis
ENSTGUG00000010214	TARBP1	99	45.173	ENSGACG00000005865	si:dkey-85a20.4	93	45.173	Gasterosteus_aculeatus
ENSTGUG00000010214	TARBP1	100	77.965	ENSGAGG00000012102	TARBP1	84	77.965	Gopherus_agassizii
ENSTGUG00000010214	TARBP1	100	66.159	ENSGGOG00000022879	TARBP1	95	66.159	Gorilla_gorilla
ENSTGUG00000010214	TARBP1	99	47.754	ENSHBUG00000008877	si:dkey-85a20.4	80	47.530	Haplochromis_burtoni
ENSTGUG00000010214	TARBP1	100	65.520	ENSHGLG00000011592	TARBP1	82	65.520	Heterocephalus_glaber_female
ENSTGUG00000010214	TARBP1	100	65.367	ENSHGLG00100015169	TARBP1	90	65.367	Heterocephalus_glaber_male
ENSTGUG00000010214	TARBP1	99	44.725	ENSIPUG00000005249	si:dkey-85a20.4	78	44.801	Ictalurus_punctatus
ENSTGUG00000010214	TARBP1	100	62.634	ENSSTOG00000032291	TARBP1	93	62.634	Ictidomys_tridecemlineatus
ENSTGUG00000010214	TARBP1	100	60.976	ENSJJAG00000017840	Tarbp1	90	61.052	Jaculus_jaculus
ENSTGUG00000010214	TARBP1	76	48.128	ENSKMAG00000017546	si:dkey-85a20.4	65	48.396	Kryptolebias_marmoratus
ENSTGUG00000010214	TARBP1	74	50.216	ENSLBEG00000012132	si:dkey-85a20.4	68	50.216	Labrus_bergylta
ENSTGUG00000010214	TARBP1	100	56.255	ENSLACG00000004337	TARBP1	80	56.255	Latimeria_chalumnae
ENSTGUG00000010214	TARBP1	99	50.228	ENSLOCG00000016214	si:dkey-85a20.4	80	50.303	Lepisosteus_oculatus
ENSTGUG00000010214	TARBP1	99	67.353	ENSLAFG00000011394	TARBP1	83	67.353	Loxodonta_africana
ENSTGUG00000010214	TARBP1	100	65.928	ENSMFAG00000041068	TARBP1	81	65.928	Macaca_fascicularis
ENSTGUG00000010214	TARBP1	100	65.928	ENSMMUG00000021703	TARBP1	80	65.928	Macaca_mulatta
ENSTGUG00000010214	TARBP1	100	68.144	ENSMNEG00000045002	TARBP1	80	68.144	Macaca_nemestrina
ENSTGUG00000010214	TARBP1	100	68.144	ENSMLEG00000044182	TARBP1	96	68.144	Mandrillus_leucophaeus
ENSTGUG00000010214	TARBP1	99	45.962	ENSMAMG00000021760	si:dkey-85a20.4	81	45.962	Mastacembelus_armatus
ENSTGUG00000010214	TARBP1	99	47.440	ENSMZEG00005005751	si:dkey-85a20.4	80	47.214	Maylandia_zebra
ENSTGUG00000010214	TARBP1	100	62.969	ENSMAUG00000020968	Tarbp1	82	62.969	Mesocricetus_auratus
ENSTGUG00000010214	TARBP1	100	61.022	ENSMICG00000015280	TARBP1	79	61.022	Microcebus_murinus
ENSTGUG00000010214	TARBP1	100	62.691	ENSMOCG00000004128	Tarbp1	82	62.691	Microtus_ochrogaster
ENSTGUG00000010214	TARBP1	99	43.514	ENSMMOG00000007795	si:dkey-85a20.4	80	43.816	Mola_mola
ENSTGUG00000010214	TARBP1	100	69.419	ENSMODG00000008504	TARBP1	79	69.343	Monodelphis_domestica
ENSTGUG00000010214	TARBP1	99	45.247	ENSMALG00000002916	si:dkey-85a20.4	80	45.448	Monopterus_albus
ENSTGUG00000010214	TARBP1	100	63.122	MGP_CAROLIEiJ_G0031729	Tarbp1	78	75.486	Mus_caroli
ENSTGUG00000010214	TARBP1	100	62.969	ENSMUSG00000090290	Tarbp1	82	62.969	Mus_musculus
ENSTGUG00000010214	TARBP1	100	62.768	MGP_PahariEiJ_G0023326	Tarbp1	82	62.768	Mus_pahari
ENSTGUG00000010214	TARBP1	100	62.969	MGP_SPRETEiJ_G0032846	Tarbp1	82	62.969	Mus_spretus
ENSTGUG00000010214	TARBP1	95	66.372	ENSMPUG00000002802	TARBP1	99	66.372	Mustela_putorius_furo
ENSTGUG00000010214	TARBP1	99	62.662	ENSMLUG00000002414	TARBP1	95	62.890	Myotis_lucifugus
ENSTGUG00000010214	TARBP1	100	68.755	ENSNLEG00000002518	TARBP1	80	68.755	Nomascus_leucogenys
ENSTGUG00000010214	TARBP1	79	72.955	ENSOPRG00000013822	TARBP1	64	72.955	Ochotona_princeps
ENSTGUG00000010214	TARBP1	100	64.939	ENSODEG00000005238	TARBP1	84	64.939	Octodon_degus
ENSTGUG00000010214	TARBP1	99	46.866	ENSONIG00000009789	si:dkey-85a20.4	93	47.164	Oreochromis_niloticus
ENSTGUG00000010214	TARBP1	100	66.514	ENSOCUG00000017418	TARBP1	80	66.616	Oryctolagus_cuniculus
ENSTGUG00000010214	TARBP1	99	44.695	ENSORLG00000010529	si:dkey-85a20.4	80	44.996	Oryzias_latipes
ENSTGUG00000010214	TARBP1	99	44.211	ENSORLG00020019264	si:dkey-85a20.4	80	44.511	Oryzias_latipes_hni
ENSTGUG00000010214	TARBP1	99	44.209	ENSORLG00015003276	si:dkey-85a20.4	80	44.512	Oryzias_latipes_hsok
ENSTGUG00000010214	TARBP1	100	64.629	ENSOGAG00000002379	TARBP1	80	64.629	Otolemur_garnettii
ENSTGUG00000010214	TARBP1	100	67.023	ENSOARG00000003434	TARBP1	86	67.023	Ovis_aries
ENSTGUG00000010214	TARBP1	100	68.602	ENSPPAG00000028097	TARBP1	96	68.602	Pan_paniscus
ENSTGUG00000010214	TARBP1	100	62.453	ENSPPRG00000013561	TARBP1	84	61.086	Panthera_pardus
ENSTGUG00000010214	TARBP1	100	66.921	ENSPTIG00000009281	TARBP1	97	66.921	Panthera_tigris_altaica
ENSTGUG00000010214	TARBP1	100	68.755	ENSPTRG00000002124	TARBP1	80	68.755	Pan_troglodytes
ENSTGUG00000010214	TARBP1	100	68.296	ENSPANG00000021933	TARBP1	80	68.296	Papio_anubis
ENSTGUG00000010214	TARBP1	100	46.812	ENSPKIG00000016716	si:dkey-85a20.4	79	46.812	Paramormyrops_kingsleyae
ENSTGUG00000010214	TARBP1	98	76.599	ENSPSIG00000010699	TARBP1	99	76.599	Pelodiscus_sinensis
ENSTGUG00000010214	TARBP1	100	63.504	ENSPEMG00000006888	Tarbp1	87	63.504	Peromyscus_maniculatus_bairdii
ENSTGUG00000010214	TARBP1	90	86.000	ENSPCIG00000029710	TARBP1	77	86.000	Phascolarctos_cinereus
ENSTGUG00000010214	TARBP1	100	45.577	ENSPFOG00000013020	si:dkey-85a20.4	93	45.577	Poecilia_formosa
ENSTGUG00000010214	TARBP1	100	45.686	ENSPLAG00000006044	si:dkey-85a20.4	80	45.686	Poecilia_latipinna
ENSTGUG00000010214	TARBP1	100	45.571	ENSPMEG00000017857	si:dkey-85a20.4	80	45.571	Poecilia_mexicana
ENSTGUG00000010214	TARBP1	100	46.491	ENSPREG00000022753	si:dkey-85a20.4	80	46.491	Poecilia_reticulata
ENSTGUG00000010214	TARBP1	89	70.909	ENSPPYG00000000102	TARBP1	78	70.909	Pongo_abelii
ENSTGUG00000010214	TARBP1	86	65.891	ENSPCAG00000004808	TARBP1	70	65.891	Procavia_capensis
ENSTGUG00000010214	TARBP1	100	64.859	ENSPCOG00000005666	TARBP1	80	64.859	Propithecus_coquereli
ENSTGUG00000010214	TARBP1	99	55.183	ENSPVAG00000014798	TARBP1	81	55.183	Pteropus_vampyrus
ENSTGUG00000010214	TARBP1	99	46.777	ENSPNYG00000019135	si:dkey-85a20.4	80	46.777	Pundamilia_nyererei
ENSTGUG00000010214	TARBP1	100	59.389	ENSRNOG00000053574	Tarbp1	82	59.389	Rattus_norvegicus
ENSTGUG00000010214	TARBP1	100	63.969	ENSRBIG00000043362	TARBP1	88	63.969	Rhinopithecus_bieti
ENSTGUG00000010214	TARBP1	100	68.220	ENSRROG00000029527	TARBP1	84	68.220	Rhinopithecus_roxellana
ENSTGUG00000010214	TARBP1	100	68.296	ENSSBOG00000034503	TARBP1	93	68.296	Saimiri_boliviensis_boliviensis
ENSTGUG00000010214	TARBP1	100	69.641	ENSSHAG00000000013	TARBP1	96	69.641	Sarcophilus_harrisii
ENSTGUG00000010214	TARBP1	99	46.257	ENSSFOG00015002660	si:dkey-85a20.4	96	46.257	Scleropages_formosus
ENSTGUG00000010214	TARBP1	99	46.426	ENSSMAG00000007081	si:dkey-85a20.4	79	46.125	Scophthalmus_maximus
ENSTGUG00000010214	TARBP1	99	44.928	ENSSDUG00000023566	si:dkey-85a20.4	80	44.885	Seriola_dumerili
ENSTGUG00000010214	TARBP1	99	46.148	ENSSLDG00000020200	si:dkey-85a20.4	80	46.032	Seriola_lalandi_dorsalis
ENSTGUG00000010214	TARBP1	94	75.291	ENSSARG00000012207	TARBP1	76	75.291	Sorex_araneus
ENSTGUG00000010214	TARBP1	100	70.444	ENSSPUG00000015364	TARBP1	81	70.368	Sphenodon_punctatus
ENSTGUG00000010214	TARBP1	99	45.974	ENSSPAG00000007213	si:dkey-85a20.4	80	45.974	Stegastes_partitus
ENSTGUG00000010214	TARBP1	94	79.508	ENSSSCG00000010160	TARBP1	79	79.508	Sus_scrofa
ENSTGUG00000010214	TARBP1	99	45.496	ENSTNIG00000016586	si:dkey-85a20.4	95	45.799	Tetraodon_nigroviridis
ENSTGUG00000010214	TARBP1	94	63.188	ENSTTRG00000008707	TARBP1	80	63.350	Tursiops_truncatus
ENSTGUG00000010214	TARBP1	100	66.667	ENSUMAG00000006730	TARBP1	97	66.667	Ursus_maritimus
ENSTGUG00000010214	TARBP1	76	87.234	ENSVPAG00000007665	TARBP1	70	87.234	Vicugna_pacos
ENSTGUG00000010214	TARBP1	100	67.406	ENSVVUG00000007460	TARBP1	96	68.016	Vulpes_vulpes
ENSTGUG00000010214	TARBP1	100	57.089	ENSXETG00000016224	tarbp1	96	57.089	Xenopus_tropicalis
ENSTGUG00000010214	TARBP1	90	49.864	ENSXCOG00000011779	si:dkey-85a20.4	88	49.864	Xiphophorus_couchianus
ENSTGUG00000010214	TARBP1	81	44.022	ENSXMAG00000009600	si:dkey-85a20.4	100	44.022	Xiphophorus_maculatus