EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000010547 (Gene tree)
Gene ID: 100228235
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 11136 bases
Position: chr15:13078874-13090009
Accession: 100228235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000010885	PRP21_like_P	PF12230.8	2.7e-52	1	1
ENSTGUP00000010885	Surp	PF01805.20	3.8e-46	1	2
ENSTGUP00000010885	Surp	PF01805.20	3.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000010998	SF3A1-201	2856	XM_002187027	ENSTGUP00000010885	770 (aa)	XP_002187063	H0ZJW6

Gene Model

Click here to download ENSTGUG00000010547's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000010547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000010547	SF3A1	99	93.904	ENSG00000099995	SF3A1	95	94.063	Homo_sapiens
ENSTGUG00000010547	SF3A1	99	85.492	ENSAPOG00000020465	sf3a1	96	84.868	Acanthochromis_polyacanthus
ENSTGUG00000010547	SF3A1	99	93.385	ENSAMEG00000007737	SF3A1	95	94.063	Ailuropoda_melanoleuca
ENSTGUG00000010547	SF3A1	99	85.938	ENSACIG00000020672	sf3a1	96	84.474	Amphilophus_citrinellus
ENSTGUG00000010547	SF3A1	99	85.492	ENSAOCG00000003060	sf3a1	96	85.000	Amphiprion_ocellaris
ENSTGUG00000010547	SF3A1	99	85.622	ENSAPEG00000010735	sf3a1	96	85.000	Amphiprion_percula
ENSTGUG00000010547	SF3A1	99	84.896	ENSATEG00000021201	sf3a1	95	84.474	Anabas_testudineus
ENSTGUG00000010547	SF3A1	100	98.833	ENSAPLG00000009057	SF3A1	99	98.833	Anas_platyrhynchos
ENSTGUG00000010547	SF3A1	100	87.833	ENSACAG00000009415	SF3A1	96	89.548	Anolis_carolinensis
ENSTGUG00000010547	SF3A1	99	93.904	ENSANAG00000032045	SF3A1	95	94.327	Aotus_nancymaae
ENSTGUG00000010547	SF3A1	99	86.031	ENSACLG00000012622	sf3a1	96	85.884	Astatotilapia_calliptera
ENSTGUG00000010547	SF3A1	99	83.721	ENSAMXG00000005382	sf3a1	97	84.646	Astyanax_mexicanus
ENSTGUG00000010547	SF3A1	99	93.515	ENSBTAG00000003390	SF3A1	95	94.195	Bos_taurus
ENSTGUG00000010547	SF3A1	85	44.790	WBGene00004188	prp-21	88	45.098	Caenorhabditis_elegans
ENSTGUG00000010547	SF3A1	99	93.904	ENSCJAG00000010370	SF3A1	95	94.327	Callithrix_jacchus
ENSTGUG00000010547	SF3A1	99	93.385	ENSCAFG00000012559	SF3A1	95	94.063	Canis_familiaris
ENSTGUG00000010547	SF3A1	99	93.385	ENSCAFG00020000838	SF3A1	95	94.063	Canis_lupus_dingo
ENSTGUG00000010547	SF3A1	99	93.385	ENSCHIG00000018642	SF3A1	95	94.063	Capra_hircus
ENSTGUG00000010547	SF3A1	99	93.515	ENSTSYG00000004739	SF3A1	95	94.063	Carlito_syrichta
ENSTGUG00000010547	SF3A1	97	76.933	ENSCAPG00000015414	SF3A1	96	77.069	Cavia_aperea
ENSTGUG00000010547	SF3A1	99	93.774	ENSCPOG00000014589	SF3A1	95	93.931	Cavia_porcellus
ENSTGUG00000010547	SF3A1	99	93.904	ENSCCAG00000032006	SF3A1	95	94.327	Cebus_capucinus
ENSTGUG00000010547	SF3A1	99	93.515	ENSCATG00000029241	SF3A1	95	94.195	Cercocebus_atys
ENSTGUG00000010547	SF3A1	99	93.144	ENSCLAG00000006508	SF3A1	95	93.536	Chinchilla_lanigera
ENSTGUG00000010547	SF3A1	99	93.645	ENSCSAG00000009470	SF3A1	95	94.195	Chlorocebus_sabaeus
ENSTGUG00000010547	SF3A1	60	97.143	ENSCHOG00000005201	SF3A1	64	97.143	Choloepus_hoffmanni
ENSTGUG00000010547	SF3A1	100	94.286	ENSCPBG00000007595	SF3A1	96	94.180	Chrysemys_picta_bellii
ENSTGUG00000010547	SF3A1	97	51.783	ENSCING00000008526	-	96	51.900	Ciona_intestinalis
ENSTGUG00000010547	SF3A1	99	51.269	ENSCSAVG00000005608	-	91	61.667	Ciona_savignyi
ENSTGUG00000010547	SF3A1	99	93.645	ENSCANG00000033564	SF3A1	95	94.195	Colobus_angolensis_palliatus
ENSTGUG00000010547	SF3A1	99	93.709	ENSCGRG00001008933	Sf3a1	95	93.799	Cricetulus_griseus_chok1gshd
ENSTGUG00000010547	SF3A1	99	93.709	ENSCGRG00000006127	Sf3a1	95	93.799	Cricetulus_griseus_crigri
ENSTGUG00000010547	SF3A1	99	83.203	ENSCSEG00000010792	sf3a1	96	82.895	Cynoglossus_semilaevis
ENSTGUG00000010547	SF3A1	100	83.721	ENSCVAG00000004560	sf3a1	96	82.872	Cyprinodon_variegatus
ENSTGUG00000010547	SF3A1	99	83.658	ENSDARG00000041887	sf3a1	96	84.585	Danio_rerio
ENSTGUG00000010547	SF3A1	99	93.273	ENSDNOG00000010629	SF3A1	95	93.421	Dasypus_novemcinctus
ENSTGUG00000010547	SF3A1	99	93.904	ENSDORG00000005613	Sf3a1	95	94.063	Dipodomys_ordii
ENSTGUG00000010547	SF3A1	67	60.584	FBgn0266917	Sf3a1	68	60.781	Drosophila_melanogaster
ENSTGUG00000010547	SF3A1	87	94.162	ENSETEG00000017194	SF3A1	95	93.825	Echinops_telfairi
ENSTGUG00000010547	SF3A1	99	68.035	ENSEBUG00000001285	sf3a1	94	68.813	Eptatretus_burgeri
ENSTGUG00000010547	SF3A1	99	93.661	ENSEASG00005010254	SF3A1	95	94.195	Equus_asinus_asinus
ENSTGUG00000010547	SF3A1	99	93.661	ENSECAG00000023962	SF3A1	95	94.195	Equus_caballus
ENSTGUG00000010547	SF3A1	75	91.908	ENSEEUG00000003159	SF3A1	83	91.908	Erinaceus_europaeus
ENSTGUG00000010547	SF3A1	99	82.065	ENSELUG00000022578	sf3a1	96	81.937	Esox_lucius
ENSTGUG00000010547	SF3A1	99	93.515	ENSFCAG00000011932	SF3A1	95	94.195	Felis_catus
ENSTGUG00000010547	SF3A1	100	98.442	ENSFALG00000006944	SF3A1	97	98.442	Ficedula_albicollis
ENSTGUG00000010547	SF3A1	99	93.126	ENSFDAG00000009560	SF3A1	95	93.668	Fukomys_damarensis
ENSTGUG00000010547	SF3A1	99	84.766	ENSFHEG00000010866	sf3a1	96	84.868	Fundulus_heteroclitus
ENSTGUG00000010547	SF3A1	100	81.582	ENSGMOG00000016024	sf3a1	96	80.131	Gadus_morhua
ENSTGUG00000010547	SF3A1	100	98.701	ENSGALG00000007937	SF3A1	97	98.701	Gallus_gallus
ENSTGUG00000010547	SF3A1	99	84.416	ENSGAFG00000009111	sf3a1	96	83.531	Gambusia_affinis
ENSTGUG00000010547	SF3A1	99	83.095	ENSGACG00000011893	sf3a1	96	82.431	Gasterosteus_aculeatus
ENSTGUG00000010547	SF3A1	96	93.894	ENSGAGG00000000762	SF3A1	95	94.053	Gopherus_agassizii
ENSTGUG00000010547	SF3A1	99	93.904	ENSGGOG00000012631	SF3A1	95	94.063	Gorilla_gorilla
ENSTGUG00000010547	SF3A1	99	86.031	ENSHBUG00000015795	sf3a1	96	85.884	Haplochromis_burtoni
ENSTGUG00000010547	SF3A1	99	93.385	ENSHGLG00000007907	SF3A1	95	93.931	Heterocephalus_glaber_female
ENSTGUG00000010547	SF3A1	99	93.385	ENSHGLG00100013799	SF3A1	95	93.931	Heterocephalus_glaber_male
ENSTGUG00000010547	SF3A1	99	81.877	ENSHCOG00000015423	sf3a1	97	81.291	Hippocampus_comes
ENSTGUG00000010547	SF3A1	99	81.371	ENSIPUG00000002470	sf3a1	97	82.260	Ictalurus_punctatus
ENSTGUG00000010547	SF3A1	99	93.782	ENSSTOG00000013892	SF3A1	95	94.327	Ictidomys_tridecemlineatus
ENSTGUG00000010547	SF3A1	100	93.669	ENSJJAG00000022566	Sf3a1	95	94.327	Jaculus_jaculus
ENSTGUG00000010547	SF3A1	99	83.724	ENSKMAG00000002400	sf3a1	96	83.816	Kryptolebias_marmoratus
ENSTGUG00000010547	SF3A1	99	84.094	ENSLBEG00000022974	sf3a1	96	83.926	Labrus_bergylta
ENSTGUG00000010547	SF3A1	99	86.010	ENSLACG00000003565	SF3A1	96	87.105	Latimeria_chalumnae
ENSTGUG00000010547	SF3A1	99	86.305	ENSLOCG00000008251	sf3a1	96	87.008	Lepisosteus_oculatus
ENSTGUG00000010547	SF3A1	99	93.515	ENSLAFG00000000448	SF3A1	95	94.195	Loxodonta_africana
ENSTGUG00000010547	SF3A1	99	59.922	ENSLAFG00000026032	-	96	59.843	Loxodonta_africana
ENSTGUG00000010547	SF3A1	99	93.515	ENSMFAG00000031979	SF3A1	95	94.063	Macaca_fascicularis
ENSTGUG00000010547	SF3A1	99	93.515	ENSMMUG00000005547	SF3A1	95	94.063	Macaca_mulatta
ENSTGUG00000010547	SF3A1	99	93.645	ENSMNEG00000037229	SF3A1	95	94.195	Macaca_nemestrina
ENSTGUG00000010547	SF3A1	99	93.645	ENSMLEG00000041908	SF3A1	95	94.195	Mandrillus_leucophaeus
ENSTGUG00000010547	SF3A1	99	85.547	ENSMAMG00000006460	sf3a1	95	85.000	Mastacembelus_armatus
ENSTGUG00000010547	SF3A1	99	86.031	ENSMZEG00005009633	sf3a1	96	85.884	Maylandia_zebra
ENSTGUG00000010547	SF3A1	100	98.701	ENSMGAG00000001330	SF3A1	99	98.701	Meleagris_gallopavo
ENSTGUG00000010547	SF3A1	95	90.068	ENSMAUG00000020317	Sf3a1	94	89.932	Mesocricetus_auratus
ENSTGUG00000010547	SF3A1	99	93.385	ENSMICG00000010038	SF3A1	95	93.931	Microcebus_murinus
ENSTGUG00000010547	SF3A1	99	93.515	ENSMOCG00000008438	Sf3a1	95	94.063	Microtus_ochrogaster
ENSTGUG00000010547	SF3A1	100	82.536	ENSMMOG00000015588	sf3a1	96	81.423	Mola_mola
ENSTGUG00000010547	SF3A1	99	93.896	ENSMODG00000009270	SF3A1	95	94.848	Monodelphis_domestica
ENSTGUG00000010547	SF3A1	99	85.267	ENSMALG00000000148	sf3a1	99	83.853	Monopterus_albus
ENSTGUG00000010547	SF3A1	99	92.866	MGP_CAROLIEiJ_G0016029	Sf3a1	95	93.404	Mus_caroli
ENSTGUG00000010547	SF3A1	99	92.866	ENSMUSG00000002129	Sf3a1	95	93.404	Mus_musculus
ENSTGUG00000010547	SF3A1	99	92.737	MGP_PahariEiJ_G0016862	Sf3a1	95	93.272	Mus_pahari
ENSTGUG00000010547	SF3A1	99	92.866	MGP_SPRETEiJ_G0016870	Sf3a1	95	93.404	Mus_spretus
ENSTGUG00000010547	SF3A1	99	93.256	ENSMPUG00000013144	SF3A1	95	93.799	Mustela_putorius_furo
ENSTGUG00000010547	SF3A1	99	93.872	ENSMLUG00000002139	SF3A1	95	94.195	Myotis_lucifugus
ENSTGUG00000010547	SF3A1	99	93.790	ENSNGAG00000016977	Sf3a1	95	93.931	Nannospalax_galili
ENSTGUG00000010547	SF3A1	99	85.901	ENSNBRG00000016642	sf3a1	96	85.884	Neolamprologus_brichardi
ENSTGUG00000010547	SF3A1	99	93.645	ENSNLEG00000003686	SF3A1	95	94.195	Nomascus_leucogenys
ENSTGUG00000010547	SF3A1	96	85.617	ENSMEUG00000008741	SF3A1	95	86.050	Notamacropus_eugenii
ENSTGUG00000010547	SF3A1	99	93.872	ENSOPRG00000016636	SF3A1	95	94.063	Ochotona_princeps
ENSTGUG00000010547	SF3A1	99	93.515	ENSODEG00000002571	SF3A1	95	93.931	Octodon_degus
ENSTGUG00000010547	SF3A1	99	84.355	ENSONIG00000010848	sf3a1	96	84.848	Oreochromis_niloticus
ENSTGUG00000010547	SF3A1	100	93.282	ENSOCUG00000007633	SF3A1	95	93.931	Oryctolagus_cuniculus
ENSTGUG00000010547	SF3A1	95	83.446	ENSORLG00000013050	sf3a1	95	84.828	Oryzias_latipes
ENSTGUG00000010547	SF3A1	98	82.759	ENSORLG00020003236	sf3a1	93	83.558	Oryzias_latipes_hni
ENSTGUG00000010547	SF3A1	99	83.506	ENSORLG00015017411	sf3a1	96	84.828	Oryzias_latipes_hsok
ENSTGUG00000010547	SF3A1	99	84.156	ENSOMEG00000013362	sf3a1	96	84.697	Oryzias_melastigma
ENSTGUG00000010547	SF3A1	99	93.385	ENSOGAG00000012931	SF3A1	95	93.931	Otolemur_garnettii
ENSTGUG00000010547	SF3A1	99	91.310	ENSOARG00000006849	SF3A1	95	91.821	Ovis_aries
ENSTGUG00000010547	SF3A1	99	92.866	ENSPPAG00000041790	SF3A1	95	92.876	Pan_paniscus
ENSTGUG00000010547	SF3A1	99	93.515	ENSPPRG00000004391	SF3A1	95	94.195	Panthera_pardus
ENSTGUG00000010547	SF3A1	99	93.385	ENSPTIG00000000844	SF3A1	98	93.931	Panthera_tigris_altaica
ENSTGUG00000010547	SF3A1	99	93.904	ENSPTRG00000014240	SF3A1	95	94.063	Pan_troglodytes
ENSTGUG00000010547	SF3A1	99	93.645	ENSPANG00000020772	SF3A1	95	94.195	Papio_anubis
ENSTGUG00000010547	SF3A1	85	93.982	ENSPSIG00000012803	SF3A1	93	97.471	Pelodiscus_sinensis
ENSTGUG00000010547	SF3A1	99	83.943	ENSPMGG00000023096	sf3a1	99	84.148	Periophthalmus_magnuspinnatus
ENSTGUG00000010547	SF3A1	99	93.971	ENSPEMG00000009494	Sf3a1	95	94.063	Peromyscus_maniculatus_bairdii
ENSTGUG00000010547	SF3A1	66	81.871	ENSPMAG00000007139	-	87	81.359	Petromyzon_marinus
ENSTGUG00000010547	SF3A1	100	93.782	ENSPCIG00000022692	SF3A1	95	94.716	Phascolarctos_cinereus
ENSTGUG00000010547	SF3A1	95	78.562	ENSPFOG00000016768	sf3a1	93	77.748	Poecilia_formosa
ENSTGUG00000010547	SF3A1	99	84.675	ENSPLAG00000017268	sf3a1	96	84.079	Poecilia_latipinna
ENSTGUG00000010547	SF3A1	86	84.858	ENSPMEG00000019811	sf3a1	98	84.234	Poecilia_mexicana
ENSTGUG00000010547	SF3A1	99	85.065	ENSPREG00000010347	sf3a1	96	84.737	Poecilia_reticulata
ENSTGUG00000010547	SF3A1	99	93.645	ENSPPYG00000011707	SF3A1	95	94.195	Pongo_abelii
ENSTGUG00000010547	SF3A1	59	96.680	ENSPCAG00000003266	SF3A1	57	96.680	Procavia_capensis
ENSTGUG00000010547	SF3A1	99	93.515	ENSPCOG00000026630	SF3A1	95	94.063	Propithecus_coquereli
ENSTGUG00000010547	SF3A1	97	92.914	ENSPVAG00000017719	SF3A1	94	92.647	Pteropus_vampyrus
ENSTGUG00000010547	SF3A1	99	86.031	ENSPNYG00000018706	sf3a1	96	85.884	Pundamilia_nyererei
ENSTGUG00000010547	SF3A1	99	83.592	ENSPNAG00000003721	sf3a1	97	84.121	Pygocentrus_nattereri
ENSTGUG00000010547	SF3A1	99	92.996	ENSRNOG00000005218	Sf3a1	95	93.536	Rattus_norvegicus
ENSTGUG00000010547	SF3A1	99	93.645	ENSRBIG00000032167	SF3A1	95	94.195	Rhinopithecus_bieti
ENSTGUG00000010547	SF3A1	99	93.645	ENSRROG00000044908	SF3A1	95	94.195	Rhinopithecus_roxellana
ENSTGUG00000010547	SF3A1	95	94.158	ENSSBOG00000021960	SF3A1	98	94.294	Saimiri_boliviensis_boliviensis
ENSTGUG00000010547	SF3A1	99	91.299	ENSSHAG00000003666	SF3A1	96	92.206	Sarcophilus_harrisii
ENSTGUG00000010547	SF3A1	100	84.299	ENSSFOG00015004579	sf3a1	96	85.583	Scleropages_formosus
ENSTGUG00000010547	SF3A1	99	82.490	ENSSMAG00000004275	sf3a1	96	81.818	Scophthalmus_maximus
ENSTGUG00000010547	SF3A1	99	85.789	ENSSDUG00000022219	sf3a1	96	84.453	Seriola_dumerili
ENSTGUG00000010547	SF3A1	99	85.789	ENSSLDG00000012642	sf3a1	96	84.453	Seriola_lalandi_dorsalis
ENSTGUG00000010547	SF3A1	99	91.004	ENSSARG00000005960	SF3A1	98	90.897	Sorex_araneus
ENSTGUG00000010547	SF3A1	99	93.653	ENSSPUG00000018863	SF3A1	96	94.648	Sphenodon_punctatus
ENSTGUG00000010547	SF3A1	99	85.603	ENSSPAG00000011856	sf3a1	96	85.112	Stegastes_partitus
ENSTGUG00000010547	SF3A1	99	93.256	ENSSSCG00000010002	SF3A1	95	93.931	Sus_scrofa
ENSTGUG00000010547	SF3A1	99	82.445	ENSTRUG00000006118	sf3a1	96	81.686	Takifugu_rubripes
ENSTGUG00000010547	SF3A1	63	84.328	ENSTNIG00000005713	sf3a1	89	83.955	Tetraodon_nigroviridis
ENSTGUG00000010547	SF3A1	99	87.093	ENSTBEG00000012771	SF3A1	95	87.335	Tupaia_belangeri
ENSTGUG00000010547	SF3A1	99	92.876	ENSTTRG00000001535	SF3A1	95	93.412	Tursiops_truncatus
ENSTGUG00000010547	SF3A1	99	92.549	ENSUAMG00000006750	SF3A1	94	93.085	Ursus_americanus
ENSTGUG00000010547	SF3A1	99	93.385	ENSUMAG00000016665	SF3A1	96	93.931	Ursus_maritimus
ENSTGUG00000010547	SF3A1	99	93.385	ENSVVUG00000003075	SF3A1	95	94.063	Vulpes_vulpes
ENSTGUG00000010547	SF3A1	99	87.122	ENSXETG00000016144	sf3a1	95	85.997	Xenopus_tropicalis
ENSTGUG00000010547	SF3A1	99	84.156	ENSXCOG00000015653	sf3a1	96	83.267	Xiphophorus_couchianus
ENSTGUG00000010547	SF3A1	99	84.286	ENSXMAG00000002753	sf3a1	96	83.399	Xiphophorus_maculatus