EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000010704 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 30138 bases
Position: chr4:65616064-65646201
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011086	RNA_pol_Rpb1_5	PF04998.17	5.9e-98	1	1
ENSTGUP00000011086	RNA_pol_Rpb1_4	PF05000.17	1.1e-24	1	1
ENSTGUP00000011086	RNA_pol_Rpb1_2	PF00623.20	7.8e-70	1	1
ENSTGUP00000011086	RNA_pol_Rpb1_3	PF04983.18	4.9e-36	1	1
ENSTGUP00000011086	RNA_pol_Rpb1_1	PF04997.12	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011206	POLR1A-201	5031	-	ENSTGUP00000011086	1676 (aa)	-	H0ZKG6

Gene Model

Click here to download ENSTGUG00000010704's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000010704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000010704	POLR1A	74	53.623	ENSTGUG00000006423	-	80	53.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000010704	POLR1A	100	69.953	ENSG00000068654	POLR1A	99	69.953	Homo_sapiens
ENSTGUG00000010704	POLR1A	68	67.647	ENSAPOG00000017945	polr1a	99	65.949	Acanthochromis_polyacanthus
ENSTGUG00000010704	POLR1A	100	70.713	ENSAMEG00000005807	POLR1A	98	74.214	Ailuropoda_melanoleuca
ENSTGUG00000010704	POLR1A	100	63.302	ENSACIG00000022147	polr1a	98	63.361	Amphilophus_citrinellus
ENSTGUG00000010704	POLR1A	100	65.100	ENSAOCG00000017336	polr1a	98	67.753	Amphiprion_ocellaris
ENSTGUG00000010704	POLR1A	100	65.159	ENSAPEG00000016105	polr1a	96	70.833	Amphiprion_percula
ENSTGUG00000010704	POLR1A	100	64.824	ENSATEG00000016773	polr1a	99	64.882	Anabas_testudineus
ENSTGUG00000010704	POLR1A	87	87.798	ENSAPLG00000013871	POLR1A	99	87.798	Anas_platyrhynchos
ENSTGUG00000010704	POLR1A	100	70.456	ENSACAG00000012141	POLR1A	99	70.456	Anolis_carolinensis
ENSTGUG00000010704	POLR1A	100	70.447	ENSANAG00000033927	POLR1A	99	70.353	Aotus_nancymaae
ENSTGUG00000010704	POLR1A	100	61.167	ENSACLG00000020541	polr1a	98	60.893	Astatotilapia_calliptera
ENSTGUG00000010704	POLR1A	100	69.784	ENSBTAG00000006481	POLR1A	99	70.477	Bos_taurus
ENSTGUG00000010704	POLR1A	99	39.013	WBGene00012999	rpoa-1	97	38.758	Caenorhabditis_elegans
ENSTGUG00000010704	POLR1A	100	70.405	ENSCJAG00000019547	POLR1A	99	70.488	Callithrix_jacchus
ENSTGUG00000010704	POLR1A	100	70.377	ENSCAFG00000007613	POLR1A	99	70.377	Canis_familiaris
ENSTGUG00000010704	POLR1A	100	70.253	ENSCAFG00020014752	POLR1A	95	74.894	Canis_lupus_dingo
ENSTGUG00000010704	POLR1A	100	70.213	ENSCHIG00000018204	POLR1A	99	69.959	Capra_hircus
ENSTGUG00000010704	POLR1A	100	69.186	ENSTSYG00000002761	POLR1A	99	69.811	Carlito_syrichta
ENSTGUG00000010704	POLR1A	99	66.825	ENSCAPG00000010132	POLR1A	100	67.445	Cavia_aperea
ENSTGUG00000010704	POLR1A	100	70.082	ENSCPOG00000012350	POLR1A	99	70.720	Cavia_porcellus
ENSTGUG00000010704	POLR1A	100	70.253	ENSCCAG00000019839	POLR1A	99	70.370	Cebus_capucinus
ENSTGUG00000010704	POLR1A	100	70.471	ENSCATG00000029786	POLR1A	99	70.294	Cercocebus_atys
ENSTGUG00000010704	POLR1A	100	69.316	ENSCLAG00000005187	POLR1A	99	69.947	Chinchilla_lanigera
ENSTGUG00000010704	POLR1A	100	70.000	ENSCSAG00000016251	POLR1A	99	70.294	Chlorocebus_sabaeus
ENSTGUG00000010704	POLR1A	99	79.703	ENSCPBG00000001115	POLR1A	99	79.703	Chrysemys_picta_bellii
ENSTGUG00000010704	POLR1A	99	46.016	ENSCSAVG00000007184	-	99	45.992	Ciona_savignyi
ENSTGUG00000010704	POLR1A	100	67.666	ENSCANG00000031785	POLR1A	99	67.607	Colobus_angolensis_palliatus
ENSTGUG00000010704	POLR1A	96	70.559	ENSCGRG00001006651	Polr1a	99	70.559	Cricetulus_griseus_chok1gshd
ENSTGUG00000010704	POLR1A	60	68.365	ENSCGRG00000010834	Polr1a	100	69.874	Cricetulus_griseus_crigri
ENSTGUG00000010704	POLR1A	100	61.625	ENSCSEG00000020190	polr1a	99	61.484	Cynoglossus_semilaevis
ENSTGUG00000010704	POLR1A	100	62.595	ENSCVAG00000020941	polr1a	99	63.652	Cyprinodon_variegatus
ENSTGUG00000010704	POLR1A	99	66.568	ENSDARG00000098375	polr1a	99	66.568	Danio_rerio
ENSTGUG00000010704	POLR1A	100	66.121	ENSDNOG00000010829	POLR1A	99	66.765	Dasypus_novemcinctus
ENSTGUG00000010704	POLR1A	100	68.885	ENSDORG00000008298	Polr1a	99	69.865	Dipodomys_ordii
ENSTGUG00000010704	POLR1A	99	42.522	FBgn0019938	RpI1	98	42.707	Drosophila_melanogaster
ENSTGUG00000010704	POLR1A	71	93.750	ENSETEG00000000412	-	70	93.750	Echinops_telfairi
ENSTGUG00000010704	POLR1A	91	46.164	ENSEBUG00000005667	-	99	46.382	Eptatretus_burgeri
ENSTGUG00000010704	POLR1A	100	70.529	ENSEASG00005001625	POLR1A	99	70.588	Equus_asinus_asinus
ENSTGUG00000010704	POLR1A	100	70.471	ENSECAG00000036306	-	98	74.601	Equus_caballus
ENSTGUG00000010704	POLR1A	100	70.471	ENSECAG00000010092	POLR1A	98	74.601	Equus_caballus
ENSTGUG00000010704	POLR1A	100	70.471	ENSECAG00000030510	-	98	74.601	Equus_caballus
ENSTGUG00000010704	POLR1A	84	80.295	ENSEEUG00000000676	POLR1A	83	80.295	Erinaceus_europaeus
ENSTGUG00000010704	POLR1A	100	66.118	ENSELUG00000012769	polr1a	97	66.431	Esox_lucius
ENSTGUG00000010704	POLR1A	100	70.416	ENSFCAG00000008966	POLR1A	99	70.689	Felis_catus
ENSTGUG00000010704	POLR1A	99	93.065	ENSFALG00000010082	POLR1A	99	93.361	Ficedula_albicollis
ENSTGUG00000010704	POLR1A	100	70.272	ENSFDAG00000013726	POLR1A	99	70.272	Fukomys_damarensis
ENSTGUG00000010704	POLR1A	100	62.292	ENSFHEG00000005996	polr1a	99	62.404	Fundulus_heteroclitus
ENSTGUG00000010704	POLR1A	100	60.024	ENSGMOG00000002230	polr1a	98	60.130	Gadus_morhua
ENSTGUG00000010704	POLR1A	90	86.139	ENSGALG00000038160	-	97	86.280	Gallus_gallus
ENSTGUG00000010704	POLR1A	100	64.113	ENSGAFG00000015266	polr1a	99	63.892	Gambusia_affinis
ENSTGUG00000010704	POLR1A	100	63.296	ENSGACG00000018791	polr1a	99	63.594	Gasterosteus_aculeatus
ENSTGUG00000010704	POLR1A	91	79.306	ENSGAGG00000004984	-	96	84.625	Gopherus_agassizii
ENSTGUG00000010704	POLR1A	100	70.070	ENSGGOG00000001788	POLR1A	99	70.070	Gorilla_gorilla
ENSTGUG00000010704	POLR1A	90	63.792	ENSHBUG00000020021	polr1a	98	63.873	Haplochromis_burtoni
ENSTGUG00000010704	POLR1A	100	70.880	ENSHGLG00000006334	POLR1A	99	70.939	Heterocephalus_glaber_female
ENSTGUG00000010704	POLR1A	100	70.560	ENSHGLG00100006614	POLR1A	99	70.619	Heterocephalus_glaber_male
ENSTGUG00000010704	POLR1A	100	61.279	ENSHCOG00000003345	polr1a	99	61.475	Hippocampus_comes
ENSTGUG00000010704	POLR1A	100	67.023	ENSIPUG00000013174	polr1a	99	66.568	Ictalurus_punctatus
ENSTGUG00000010704	POLR1A	100	70.154	ENSSTOG00000012580	POLR1A	99	70.095	Ictidomys_tridecemlineatus
ENSTGUG00000010704	POLR1A	100	69.670	ENSJJAG00000013113	Polr1a	99	70.112	Jaculus_jaculus
ENSTGUG00000010704	POLR1A	100	65.346	ENSKMAG00000007399	polr1a	99	65.483	Kryptolebias_marmoratus
ENSTGUG00000010704	POLR1A	94	67.038	ENSLBEG00000015401	polr1a	97	67.794	Labrus_bergylta
ENSTGUG00000010704	POLR1A	53	74.582	ENSLACG00000003218	polr1a	97	74.582	Latimeria_chalumnae
ENSTGUG00000010704	POLR1A	100	70.342	ENSLOCG00000010881	polr1a	99	70.342	Lepisosteus_oculatus
ENSTGUG00000010704	POLR1A	100	70.855	ENSLAFG00000014948	POLR1A	99	70.501	Loxodonta_africana
ENSTGUG00000010704	POLR1A	100	70.059	ENSMFAG00000046097	POLR1A	99	70.294	Macaca_fascicularis
ENSTGUG00000010704	POLR1A	100	70.059	ENSMMUG00000015815	POLR1A	99	70.294	Macaca_mulatta
ENSTGUG00000010704	POLR1A	100	70.059	ENSMNEG00000043313	POLR1A	99	70.294	Macaca_nemestrina
ENSTGUG00000010704	POLR1A	100	70.059	ENSMLEG00000042428	POLR1A	99	70.000	Mandrillus_leucophaeus
ENSTGUG00000010704	POLR1A	100	64.751	ENSMAMG00000016565	polr1a	99	64.751	Mastacembelus_armatus
ENSTGUG00000010704	POLR1A	100	64.862	ENSMZEG00005004915	polr1a	99	64.744	Maylandia_zebra
ENSTGUG00000010704	POLR1A	99	83.118	ENSMGAG00000013111	POLR1A	99	83.549	Meleagris_gallopavo
ENSTGUG00000010704	POLR1A	93	70.947	ENSMAUG00000008497	Polr1a	99	71.011	Mesocricetus_auratus
ENSTGUG00000010704	POLR1A	100	69.397	ENSMICG00000000757	POLR1A	99	69.724	Microcebus_murinus
ENSTGUG00000010704	POLR1A	100	70.873	ENSMOCG00000000122	Polr1a	99	70.814	Microtus_ochrogaster
ENSTGUG00000010704	POLR1A	100	63.405	ENSMMOG00000010216	polr1a	99	63.572	Mola_mola
ENSTGUG00000010704	POLR1A	100	68.007	ENSMODG00000009335	POLR1A	99	67.832	Monodelphis_domestica
ENSTGUG00000010704	POLR1A	100	64.446	ENSMALG00000013363	polr1a	100	64.104	Monopterus_albus
ENSTGUG00000010704	POLR1A	100	70.029	MGP_CAROLIEiJ_G0028494	Polr1a	99	70.383	Mus_caroli
ENSTGUG00000010704	POLR1A	100	70.501	ENSMUSG00000049553	Polr1a	99	70.501	Mus_musculus
ENSTGUG00000010704	POLR1A	100	69.487	MGP_PahariEiJ_G0022230	Polr1a	99	70.324	Mus_pahari
ENSTGUG00000010704	POLR1A	100	69.311	MGP_SPRETEiJ_G0029499	Polr1a	99	69.311	Mus_spretus
ENSTGUG00000010704	POLR1A	100	70.630	ENSMPUG00000009135	POLR1A	99	70.630	Mustela_putorius_furo
ENSTGUG00000010704	POLR1A	100	69.672	ENSMLUG00000015723	POLR1A	99	70.106	Myotis_lucifugus
ENSTGUG00000010704	POLR1A	100	70.831	ENSNGAG00000017907	Polr1a	99	70.654	Nannospalax_galili
ENSTGUG00000010704	POLR1A	100	65.307	ENSNBRG00000000519	polr1a	99	65.307	Neolamprologus_brichardi
ENSTGUG00000010704	POLR1A	100	67.853	ENSNLEG00000002264	POLR1A	99	68.150	Nomascus_leucogenys
ENSTGUG00000010704	POLR1A	75	89.764	ENSMEUG00000011665	-	74	89.764	Notamacropus_eugenii
ENSTGUG00000010704	POLR1A	99	65.230	ENSOPRG00000008269	POLR1A	99	65.546	Ochotona_princeps
ENSTGUG00000010704	POLR1A	100	69.754	ENSODEG00000003542	POLR1A	99	70.626	Octodon_degus
ENSTGUG00000010704	POLR1A	100	64.416	ENSONIG00000015895	polr1a	99	64.941	Oreochromis_niloticus
ENSTGUG00000010704	POLR1A	100	70.554	ENSOCUG00000010138	POLR1A	99	70.924	Oryctolagus_cuniculus
ENSTGUG00000010704	POLR1A	100	64.737	ENSORLG00000008753	polr1a	98	64.855	Oryzias_latipes
ENSTGUG00000010704	POLR1A	100	63.320	ENSORLG00020020726	polr1a	98	63.728	Oryzias_latipes_hni
ENSTGUG00000010704	POLR1A	95	77.143	ENSORLG00015016071	polr1a	97	77.143	Oryzias_latipes_hsok
ENSTGUG00000010704	POLR1A	100	69.836	ENSOGAG00000004031	POLR1A	99	70.176	Otolemur_garnettii
ENSTGUG00000010704	POLR1A	100	69.464	ENSOARG00000020601	POLR1A	99	70.153	Ovis_aries
ENSTGUG00000010704	POLR1A	100	70.059	ENSPPAG00000042450	POLR1A	99	70.059	Pan_paniscus
ENSTGUG00000010704	POLR1A	100	70.571	ENSPPRG00000006702	POLR1A	99	70.512	Panthera_pardus
ENSTGUG00000010704	POLR1A	100	70.147	ENSPTIG00000018783	POLR1A	99	70.088	Panthera_tigris_altaica
ENSTGUG00000010704	POLR1A	100	69.718	ENSPTRG00000012147	POLR1A	99	70.294	Pan_troglodytes
ENSTGUG00000010704	POLR1A	100	70.529	ENSPANG00000025908	POLR1A	99	70.353	Papio_anubis
ENSTGUG00000010704	POLR1A	100	66.962	ENSPKIG00000005468	polr1a	97	72.358	Paramormyrops_kingsleyae
ENSTGUG00000010704	POLR1A	63	77.467	ENSPSIG00000009321	-	99	77.509	Pelodiscus_sinensis
ENSTGUG00000010704	POLR1A	56	66.844	ENSPMGG00000009718	polr1a	95	66.844	Periophthalmus_magnuspinnatus
ENSTGUG00000010704	POLR1A	100	70.713	ENSPEMG00000022224	Polr1a	99	70.782	Peromyscus_maniculatus_bairdii
ENSTGUG00000010704	POLR1A	95	70.738	ENSPCIG00000004222	POLR1A	98	70.738	Phascolarctos_cinereus
ENSTGUG00000010704	POLR1A	100	64.315	ENSPFOG00000005025	polr1a	99	64.609	Poecilia_formosa
ENSTGUG00000010704	POLR1A	100	64.311	ENSPLAG00000021389	polr1a	99	64.261	Poecilia_latipinna
ENSTGUG00000010704	POLR1A	100	62.426	ENSPMEG00000006463	polr1a	99	62.588	Poecilia_mexicana
ENSTGUG00000010704	POLR1A	100	64.529	ENSPREG00000002389	polr1a	99	64.386	Poecilia_reticulata
ENSTGUG00000010704	POLR1A	100	69.425	ENSPPYG00000012217	POLR1A	99	69.412	Pongo_abelii
ENSTGUG00000010704	POLR1A	92	68.006	ENSPCAG00000011582	POLR1A	91	68.006	Procavia_capensis
ENSTGUG00000010704	POLR1A	100	69.754	ENSPCOG00000026987	POLR1A	99	70.194	Propithecus_coquereli
ENSTGUG00000010704	POLR1A	94	69.158	ENSPVAG00000012674	POLR1A	94	69.793	Pteropus_vampyrus
ENSTGUG00000010704	POLR1A	100	64.941	ENSPNYG00000000026	polr1a	99	64.824	Pundamilia_nyererei
ENSTGUG00000010704	POLR1A	100	66.647	ENSPNAG00000019223	polr1a	98	68.573	Pygocentrus_nattereri
ENSTGUG00000010704	POLR1A	100	70.956	ENSRNOG00000009545	Polr1a	99	70.838	Rattus_norvegicus
ENSTGUG00000010704	POLR1A	100	69.765	ENSRBIG00000028335	POLR1A	99	70.235	Rhinopithecus_bieti
ENSTGUG00000010704	POLR1A	100	69.706	ENSRROG00000031473	POLR1A	100	69.275	Rhinopithecus_roxellana
ENSTGUG00000010704	POLR1A	99	37.621	YOR341W	RPA190	98	37.621	Saccharomyces_cerevisiae
ENSTGUG00000010704	POLR1A	100	70.076	ENSSBOG00000030262	POLR1A	99	70.076	Saimiri_boliviensis_boliviensis
ENSTGUG00000010704	POLR1A	100	65.598	ENSSHAG00000014739	POLR1A	99	65.731	Sarcophilus_harrisii
ENSTGUG00000010704	POLR1A	100	67.349	ENSSFOG00015019716	polr1a	99	68.222	Scleropages_formosus
ENSTGUG00000010704	POLR1A	100	65.215	ENSSMAG00000014342	polr1a	99	65.194	Scophthalmus_maximus
ENSTGUG00000010704	POLR1A	100	64.930	ENSSDUG00000014631	polr1a	99	65.726	Seriola_dumerili
ENSTGUG00000010704	POLR1A	100	63.825	ENSSLDG00000024095	polr1a	99	64.265	Seriola_lalandi_dorsalis
ENSTGUG00000010704	POLR1A	73	84.043	ENSSARG00000003136	-	75	84.043	Sorex_araneus
ENSTGUG00000010704	POLR1A	100	73.634	ENSSPUG00000004215	POLR1A	96	78.462	Sphenodon_punctatus
ENSTGUG00000010704	POLR1A	63	71.251	ENSSPAG00000016341	polr1a	92	71.251	Stegastes_partitus
ENSTGUG00000010704	POLR1A	83	72.171	ENSSSCG00000008226	POLR1A	98	72.171	Sus_scrofa
ENSTGUG00000010704	POLR1A	100	62.581	ENSTRUG00000002210	polr1a	99	62.715	Takifugu_rubripes
ENSTGUG00000010704	POLR1A	100	58.879	ENSTNIG00000010116	polr1a	99	58.879	Tetraodon_nigroviridis
ENSTGUG00000010704	POLR1A	73	85.088	ENSTBEG00000008646	POLR1A	72	85.088	Tupaia_belangeri
ENSTGUG00000010704	POLR1A	100	67.571	ENSTTRG00000008597	POLR1A	99	67.630	Tursiops_truncatus
ENSTGUG00000010704	POLR1A	69	70.479	ENSUAMG00000012158	-	94	71.151	Ursus_americanus
ENSTGUG00000010704	POLR1A	100	69.718	ENSUMAG00000006700	POLR1A	97	74.286	Ursus_maritimus
ENSTGUG00000010704	POLR1A	100	70.377	ENSVVUG00000001245	POLR1A	99	70.377	Vulpes_vulpes
ENSTGUG00000010704	POLR1A	100	66.138	ENSXETG00000001952	polr1a	98	67.520	Xenopus_tropicalis
ENSTGUG00000010704	POLR1A	100	64.012	ENSXMAG00000004032	polr1a	99	64.307	Xiphophorus_maculatus