EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000010760 (Gene tree)
Gene ID: -
Gene Symbol: PTCD3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 18316 bases
Position: chr4:65651797-65670112
Accession: 24717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011104	PPR	PF01535.20	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011224	PTCD3-201	2067	-	ENSTGUP00000011104	537 (aa)	-	H0ZKI4

Gene Model

Click here to download ENSTGUG00000010760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000010760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000010760	PTCD3	99	50.362	ENSACIG00000022263	ptcd3	89	50.362	Amphilophus_citrinellus
ENSTGUG00000010760	PTCD3	100	52.045	ENSAOCG00000017186	ptcd3	78	52.045	Amphiprion_ocellaris
ENSTGUG00000010760	PTCD3	100	51.859	ENSAPEG00000016069	ptcd3	79	51.859	Amphiprion_percula
ENSTGUG00000010760	PTCD3	95	77.369	ENSAPLG00000005086	PTCD3	85	77.369	Anas_platyrhynchos
ENSTGUG00000010760	PTCD3	100	52.134	ENSACLG00000020653	ptcd3	80	52.134	Astatotilapia_calliptera
ENSTGUG00000010760	PTCD3	100	52.416	ENSAMXG00000011570	ptcd3	80	52.416	Astyanax_mexicanus
ENSTGUG00000010760	PTCD3	100	49.815	ENSCVAG00000020820	ptcd3	85	50.282	Cyprinodon_variegatus
ENSTGUG00000010760	PTCD3	94	46.680	ENSGAFG00000015291	ptcd3	82	46.484	Gambusia_affinis
ENSTGUG00000010760	PTCD3	100	52.319	ENSHBUG00000020056	ptcd3	83	52.381	Haplochromis_burtoni
ENSTGUG00000010760	PTCD3	100	50.649	ENSLBEG00000015349	ptcd3	80	50.649	Labrus_bergylta
ENSTGUG00000010760	PTCD3	100	52.319	ENSMZEG00005004980	ptcd3	80	52.319	Maylandia_zebra
ENSTGUG00000010760	PTCD3	100	70.295	ENSMGAG00000013124	PTCD3	86	69.708	Meleagris_gallopavo
ENSTGUG00000010760	PTCD3	100	51.296	ENSMALG00000013282	ptcd3	80	51.296	Monopterus_albus
ENSTGUG00000010760	PTCD3	99	49.064	ENSNBRG00000000447	ptcd3	88	49.064	Neolamprologus_brichardi
ENSTGUG00000010760	PTCD3	100	52.134	ENSONIG00000015886	ptcd3	84	51.481	Oreochromis_niloticus
ENSTGUG00000010760	PTCD3	100	51.577	ENSORLG00000008776	ptcd3	82	52.118	Oryzias_latipes
ENSTGUG00000010760	PTCD3	100	51.206	ENSORLG00020020676	ptcd3	79	51.750	Oryzias_latipes_hni
ENSTGUG00000010760	PTCD3	95	43.269	ENSORLG00015015978	ptcd3	87	44.084	Oryzias_latipes_hsok
ENSTGUG00000010760	PTCD3	100	50.000	ENSPFOG00000004442	ptcd3	84	50.000	Poecilia_formosa
ENSTGUG00000010760	PTCD3	100	47.979	ENSPLAG00000021401	ptcd3	90	47.979	Poecilia_latipinna
ENSTGUG00000010760	PTCD3	97	46.958	ENSPMEG00000007153	ptcd3	91	45.935	Poecilia_mexicana
ENSTGUG00000010760	PTCD3	100	50.725	ENSSFOG00015019643	ptcd3	85	51.201	Scleropages_formosus
ENSTGUG00000010760	PTCD3	100	50.464	ENSTRUG00000003939	ptcd3	82	50.464	Takifugu_rubripes