EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000010795 (Gene tree)
Gene ID: 100225693
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 2721 bases
Position: chr1:35407371-35410091
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011124	RNA_ligase	PF09414.10	5.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011244	LIG4-201	2721	-	ENSTGUP00000011124	906 (aa)	-	H0ZKK3

Gene Model

Click here to download ENSTGUG00000010795's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000010795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000010795	LIG4	99	75.996	ENSG00000174405	LIG4	100	75.711	Homo_sapiens
ENSTGUG00000010795	LIG4	100	66.998	ENSAPOG00000000866	lig4	99	66.998	Acanthochromis_polyacanthus
ENSTGUG00000010795	LIG4	99	72.979	ENSAMEG00000019685	LIG4	99	72.979	Ailuropoda_melanoleuca
ENSTGUG00000010795	LIG4	99	66.961	ENSACIG00000018309	lig4	99	66.961	Amphilophus_citrinellus
ENSTGUG00000010795	LIG4	100	66.446	ENSAOCG00000011768	lig4	99	66.446	Amphiprion_ocellaris
ENSTGUG00000010795	LIG4	100	66.556	ENSAPEG00000017815	lig4	99	66.556	Amphiprion_percula
ENSTGUG00000010795	LIG4	99	66.444	ENSATEG00000005583	lig4	99	66.444	Anabas_testudineus
ENSTGUG00000010795	LIG4	97	90.992	ENSAPLG00000001673	LIG4	99	90.992	Anas_platyrhynchos
ENSTGUG00000010795	LIG4	99	78.319	ENSACAG00000014566	LIG4	99	78.319	Anolis_carolinensis
ENSTGUG00000010795	LIG4	99	74.336	ENSANAG00000012446	LIG4	99	74.336	Aotus_nancymaae
ENSTGUG00000010795	LIG4	99	66.741	ENSACLG00000027051	lig4	99	66.741	Astatotilapia_calliptera
ENSTGUG00000010795	LIG4	99	66.260	ENSAMXG00000008192	lig4	93	66.260	Astyanax_mexicanus
ENSTGUG00000010795	LIG4	99	74.336	ENSBTAG00000015868	LIG4	99	74.336	Bos_taurus
ENSTGUG00000010795	LIG4	99	74.336	ENSCJAG00000014689	LIG4	99	74.336	Callithrix_jacchus
ENSTGUG00000010795	LIG4	99	73.783	ENSCAFG00000006031	LIG4	99	73.783	Canis_familiaris
ENSTGUG00000010795	LIG4	99	73.783	ENSCAFG00020021230	LIG4	99	73.783	Canis_lupus_dingo
ENSTGUG00000010795	LIG4	99	74.336	ENSCHIG00000001019	LIG4	99	74.336	Capra_hircus
ENSTGUG00000010795	LIG4	99	74.751	ENSCAPG00000006284	LIG4	99	74.751	Cavia_aperea
ENSTGUG00000010795	LIG4	99	74.558	ENSCPOG00000014266	LIG4	99	74.558	Cavia_porcellus
ENSTGUG00000010795	LIG4	99	74.336	ENSCCAG00000019971	LIG4	99	74.336	Cebus_capucinus
ENSTGUG00000010795	LIG4	100	74.725	ENSCATG00000021075	LIG4	99	74.725	Cercocebus_atys
ENSTGUG00000010795	LIG4	99	74.668	ENSCLAG00000003376	LIG4	99	74.668	Chinchilla_lanigera
ENSTGUG00000010795	LIG4	100	74.835	ENSCSAG00000000211	LIG4	99	74.835	Chlorocebus_sabaeus
ENSTGUG00000010795	LIG4	99	82.522	ENSCPBG00000023291	LIG4	99	82.541	Chrysemys_picta_bellii
ENSTGUG00000010795	LIG4	69	45.325	ENSCING00000009536	-	96	45.325	Ciona_intestinalis
ENSTGUG00000010795	LIG4	83	45.204	ENSCSAVG00000010336	-	98	45.204	Ciona_savignyi
ENSTGUG00000010795	LIG4	100	74.396	ENSCANG00000005805	LIG4	99	74.396	Colobus_angolensis_palliatus
ENSTGUG00000010795	LIG4	99	73.702	ENSCGRG00001012072	Lig4	99	73.702	Cricetulus_griseus_chok1gshd
ENSTGUG00000010795	LIG4	99	73.702	ENSCGRG00000013417	Lig4	99	73.702	Cricetulus_griseus_crigri
ENSTGUG00000010795	LIG4	97	67.580	ENSCSEG00000013905	lig4	95	67.580	Cynoglossus_semilaevis
ENSTGUG00000010795	LIG4	99	67.631	ENSCVAG00000007896	lig4	99	67.631	Cyprinodon_variegatus
ENSTGUG00000010795	LIG4	99	65.188	ENSDARG00000060620	lig4	99	65.188	Danio_rerio
ENSTGUG00000010795	LIG4	99	74.807	ENSDNOG00000000513	LIG4	99	74.807	Dasypus_novemcinctus
ENSTGUG00000010795	LIG4	99	75.442	ENSDORG00000027303	Lig4	99	75.442	Dipodomys_ordii
ENSTGUG00000010795	LIG4	89	31.653	FBgn0030506	Lig4	91	31.653	Drosophila_melanogaster
ENSTGUG00000010795	LIG4	99	71.729	ENSETEG00000015563	LIG4	100	72.062	Echinops_telfairi
ENSTGUG00000010795	LIG4	99	43.590	ENSEBUG00000014243	lig4	98	43.492	Eptatretus_burgeri
ENSTGUG00000010795	LIG4	99	74.447	ENSEASG00005022073	LIG4	99	74.447	Equus_asinus_asinus
ENSTGUG00000010795	LIG4	99	74.336	ENSECAG00000003257	LIG4	99	74.336	Equus_caballus
ENSTGUG00000010795	LIG4	99	68.333	ENSELUG00000006787	lig4	99	68.333	Esox_lucius
ENSTGUG00000010795	LIG4	99	73.230	ENSFCAG00000031985	LIG4	99	73.230	Felis_catus
ENSTGUG00000010795	LIG4	90	94.103	ENSFALG00000004214	LIG4	99	94.103	Ficedula_albicollis
ENSTGUG00000010795	LIG4	99	74.226	ENSFDAG00000008973	LIG4	99	74.226	Fukomys_damarensis
ENSTGUG00000010795	LIG4	99	67.444	ENSFHEG00000007398	lig4	89	67.444	Fundulus_heteroclitus
ENSTGUG00000010795	LIG4	85	63.824	ENSGMOG00000012843	lig4	99	63.824	Gadus_morhua
ENSTGUG00000010795	LIG4	100	89.526	ENSGALG00000016854	LIG4	99	89.526	Gallus_gallus
ENSTGUG00000010795	LIG4	99	67.001	ENSGAFG00000019779	lig4	95	66.926	Gambusia_affinis
ENSTGUG00000010795	LIG4	99	64.928	ENSGACG00000014135	lig4	99	64.928	Gasterosteus_aculeatus
ENSTGUG00000010795	LIG4	99	75.774	ENSGGOG00000027771	LIG4	99	75.774	Gorilla_gorilla
ENSTGUG00000010795	LIG4	99	66.518	ENSHBUG00000006245	lig4	99	66.518	Haplochromis_burtoni
ENSTGUG00000010795	LIG4	99	74.004	ENSHGLG00000000718	LIG4	99	74.004	Heterocephalus_glaber_female
ENSTGUG00000010795	LIG4	99	74.004	ENSHGLG00100003265	LIG4	99	74.004	Heterocephalus_glaber_male
ENSTGUG00000010795	LIG4	99	66.481	ENSHCOG00000012010	lig4	98	66.481	Hippocampus_comes
ENSTGUG00000010795	LIG4	99	66.925	ENSIPUG00000013748	lig4	99	66.925	Ictalurus_punctatus
ENSTGUG00000010795	LIG4	100	73.516	ENSSTOG00000024303	LIG4	99	73.516	Ictidomys_tridecemlineatus
ENSTGUG00000010795	LIG4	99	73.009	ENSJJAG00000006750	Lig4	99	73.009	Jaculus_jaculus
ENSTGUG00000010795	LIG4	99	65.851	ENSKMAG00000001149	lig4	99	65.851	Kryptolebias_marmoratus
ENSTGUG00000010795	LIG4	91	66.224	ENSLBEG00000014578	lig4	100	66.224	Labrus_bergylta
ENSTGUG00000010795	LIG4	99	73.976	ENSLACG00000003282	LIG4	99	73.976	Latimeria_chalumnae
ENSTGUG00000010795	LIG4	99	70.861	ENSLOCG00000008901	lig4	98	70.861	Lepisosteus_oculatus
ENSTGUG00000010795	LIG4	99	72.707	ENSLAFG00000031152	LIG4	99	72.707	Loxodonta_africana
ENSTGUG00000010795	LIG4	100	74.835	ENSMFAG00000037235	LIG4	99	74.835	Macaca_fascicularis
ENSTGUG00000010795	LIG4	100	74.615	ENSMMUG00000008874	LIG4	99	74.615	Macaca_mulatta
ENSTGUG00000010795	LIG4	100	74.835	ENSMNEG00000023575	LIG4	99	74.835	Macaca_nemestrina
ENSTGUG00000010795	LIG4	100	74.725	ENSMLEG00000026720	LIG4	99	74.725	Mandrillus_leucophaeus
ENSTGUG00000010795	LIG4	99	66.961	ENSMAMG00000008472	lig4	99	66.961	Mastacembelus_armatus
ENSTGUG00000010795	LIG4	99	66.741	ENSMZEG00005001855	lig4	99	66.741	Maylandia_zebra
ENSTGUG00000010795	LIG4	99	89.800	ENSMGAG00000015532	LIG4	99	89.800	Meleagris_gallopavo
ENSTGUG00000010795	LIG4	99	73.783	ENSMOCG00000019000	Lig4	99	73.783	Microtus_ochrogaster
ENSTGUG00000010795	LIG4	99	65.295	ENSMMOG00000004390	lig4	99	65.295	Mola_mola
ENSTGUG00000010795	LIG4	99	76.049	ENSMODG00000025064	LIG4	99	76.406	Monodelphis_domestica
ENSTGUG00000010795	LIG4	99	66.296	ENSMALG00000008555	lig4	99	66.296	Monopterus_albus
ENSTGUG00000010795	LIG4	100	73.626	MGP_CAROLIEiJ_G0030809	Lig4	99	73.626	Mus_caroli
ENSTGUG00000010795	LIG4	100	73.187	ENSMUSG00000049717	Lig4	99	73.187	Mus_musculus
ENSTGUG00000010795	LIG4	100	73.736	MGP_PahariEiJ_G0021270	Lig4	99	73.736	Mus_pahari
ENSTGUG00000010795	LIG4	100	73.187	MGP_SPRETEiJ_G0031917	Lig4	99	73.187	Mus_spretus
ENSTGUG00000010795	LIG4	99	73.976	ENSMPUG00000018675	LIG4	99	73.976	Mustela_putorius_furo
ENSTGUG00000010795	LIG4	99	74.668	ENSMLUG00000001267	LIG4	99	74.668	Myotis_lucifugus
ENSTGUG00000010795	LIG4	100	73.077	ENSNGAG00000013258	Lig4	99	73.077	Nannospalax_galili
ENSTGUG00000010795	LIG4	99	66.518	ENSNBRG00000021252	lig4	99	66.518	Neolamprologus_brichardi
ENSTGUG00000010795	LIG4	99	75.221	ENSNLEG00000007888	LIG4	99	75.221	Nomascus_leucogenys
ENSTGUG00000010795	LIG4	99	72.788	ENSOPRG00000005765	LIG4	99	72.788	Ochotona_princeps
ENSTGUG00000010795	LIG4	99	73.894	ENSODEG00000019683	LIG4	99	73.894	Octodon_degus
ENSTGUG00000010795	LIG4	99	66.185	ENSONIG00000011969	lig4	97	66.185	Oreochromis_niloticus
ENSTGUG00000010795	LIG4	99	73.341	ENSOCUG00000015734	LIG4	99	73.341	Oryctolagus_cuniculus
ENSTGUG00000010795	LIG4	99	66.224	ENSORLG00000004041	lig4	99	66.334	Oryzias_latipes
ENSTGUG00000010795	LIG4	99	66.593	ENSORLG00020019607	lig4	99	66.704	Oryzias_latipes_hni
ENSTGUG00000010795	LIG4	99	66.261	ENSORLG00015017754	lig4	99	66.372	Oryzias_latipes_hsok
ENSTGUG00000010795	LIG4	75	70.441	ENSOMEG00000003459	lig4	99	70.441	Oryzias_melastigma
ENSTGUG00000010795	LIG4	100	72.857	ENSOGAG00000032120	LIG4	99	72.857	Otolemur_garnettii
ENSTGUG00000010795	LIG4	81	77.913	ENSOARG00000005590	LIG4	97	77.913	Ovis_aries
ENSTGUG00000010795	LIG4	99	75.442	ENSPPAG00000032998	LIG4	99	75.442	Pan_paniscus
ENSTGUG00000010795	LIG4	99	73.783	ENSPPRG00000017804	LIG4	99	73.783	Panthera_pardus
ENSTGUG00000010795	LIG4	99	73.673	ENSPTIG00000010051	LIG4	99	73.673	Panthera_tigris_altaica
ENSTGUG00000010795	LIG4	99	75.553	ENSPTRG00000006025	LIG4	99	75.553	Pan_troglodytes
ENSTGUG00000010795	LIG4	100	74.835	ENSPANG00000007562	LIG4	99	74.835	Papio_anubis
ENSTGUG00000010795	LIG4	99	67.592	ENSPKIG00000011645	lig4	98	67.592	Paramormyrops_kingsleyae
ENSTGUG00000010795	LIG4	99	82.503	ENSPSIG00000001504	LIG4	99	82.503	Pelodiscus_sinensis
ENSTGUG00000010795	LIG4	99	64.844	ENSPMGG00000013486	lig4	99	64.459	Periophthalmus_magnuspinnatus
ENSTGUG00000010795	LIG4	99	74.254	ENSPEMG00000000076	Lig4	99	74.254	Peromyscus_maniculatus_bairdii
ENSTGUG00000010795	LIG4	99	76.243	ENSPCIG00000021882	LIG4	99	76.243	Phascolarctos_cinereus
ENSTGUG00000010795	LIG4	99	67.411	ENSPFOG00000000797	lig4	98	67.333	Poecilia_formosa
ENSTGUG00000010795	LIG4	99	67.411	ENSPLAG00000001196	lig4	98	67.333	Poecilia_latipinna
ENSTGUG00000010795	LIG4	99	67.522	ENSPMEG00000021353	lig4	98	67.444	Poecilia_mexicana
ENSTGUG00000010795	LIG4	99	67.299	ENSPREG00000007323	lig4	98	67.222	Poecilia_reticulata
ENSTGUG00000010795	LIG4	99	75.111	ENSPPYG00000005540	LIG4	99	75.111	Pongo_abelii
ENSTGUG00000010795	LIG4	100	73.297	ENSPVAG00000016403	LIG4	99	73.297	Pteropus_vampyrus
ENSTGUG00000010795	LIG4	99	66.630	ENSPNYG00000009660	lig4	99	66.630	Pundamilia_nyererei
ENSTGUG00000010795	LIG4	99	66.185	ENSPNAG00000028056	lig4	99	66.407	Pygocentrus_nattereri
ENSTGUG00000010795	LIG4	99	66.185	ENSPNAG00000028069	LIG4	99	66.407	Pygocentrus_nattereri
ENSTGUG00000010795	LIG4	100	72.308	ENSRNOG00000014605	Lig4	99	72.308	Rattus_norvegicus
ENSTGUG00000010795	LIG4	100	73.187	ENSRBIG00000039962	LIG4	99	73.187	Rhinopithecus_bieti
ENSTGUG00000010795	LIG4	100	74.176	ENSRROG00000006040	LIG4	99	74.176	Rhinopithecus_roxellana
ENSTGUG00000010795	LIG4	99	74.226	ENSSBOG00000019029	LIG4	99	74.226	Saimiri_boliviensis_boliviensis
ENSTGUG00000010795	LIG4	99	73.894	ENSSHAG00000009525	LIG4	99	74.475	Sarcophilus_harrisii
ENSTGUG00000010795	LIG4	99	66.962	ENSSFOG00015012835	lig4	99	66.962	Scleropages_formosus
ENSTGUG00000010795	LIG4	99	63.960	ENSSMAG00000011267	lig4	99	63.960	Scophthalmus_maximus
ENSTGUG00000010795	LIG4	99	66.667	ENSSDUG00000010343	lig4	98	66.667	Seriola_dumerili
ENSTGUG00000010795	LIG4	99	65.338	ENSSLDG00000003239	lig4	99	65.376	Seriola_lalandi_dorsalis
ENSTGUG00000010795	LIG4	100	71.522	ENSSARG00000006573	LIG4	99	71.522	Sorex_araneus
ENSTGUG00000010795	LIG4	93	80.262	ENSSPUG00000002444	LIG4	100	80.262	Sphenodon_punctatus
ENSTGUG00000010795	LIG4	100	66.115	ENSSPAG00000001609	lig4	99	66.115	Stegastes_partitus
ENSTGUG00000010795	LIG4	99	74.614	ENSSSCG00000009540	LIG4	99	74.614	Sus_scrofa
ENSTGUG00000010795	LIG4	99	65.962	ENSTRUG00000009984	lig4	99	65.962	Takifugu_rubripes
ENSTGUG00000010795	LIG4	99	65.628	ENSTNIG00000010348	lig4	99	65.851	Tetraodon_nigroviridis
ENSTGUG00000010795	LIG4	99	74.779	ENSTBEG00000017741	LIG4	99	74.779	Tupaia_belangeri
ENSTGUG00000010795	LIG4	99	73.341	ENSTTRG00000012660	LIG4	99	73.341	Tursiops_truncatus
ENSTGUG00000010795	LIG4	99	73.090	ENSUAMG00000003773	LIG4	99	73.090	Ursus_americanus
ENSTGUG00000010795	LIG4	99	72.506	ENSXETG00000002654	lig4	99	72.506	Xenopus_tropicalis
ENSTGUG00000010795	LIG4	99	67.188	ENSXCOG00000017401	lig4	98	67.111	Xiphophorus_couchianus
ENSTGUG00000010795	LIG4	99	67.299	ENSXMAG00000015142	lig4	98	67.222	Xiphophorus_maculatus