EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000011140 (Gene tree)
Gene ID: 100226905
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 7409 bases
Position: chr9:25393974-25401382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011491	NMD3	PF04981.13	3.3e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011616	-	1871	-	ENSTGUP00000011491	503 (aa)	-	H0ZLL8

Gene Model

Click here to download ENSTGUG00000011140's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG
tgu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000011140	-	91	96.746	ENSTGUG00000015141	-	100	96.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011140	-	100	81.511	ENSG00000169251	NMD3	100	81.511	Homo_sapiens
ENSTGUG00000011140	-	100	79.563	ENSAPOG00000022912	nmd3	99	79.563	Acanthochromis_polyacanthus
ENSTGUG00000011140	-	100	80.952	ENSAMEG00000001584	NMD3	99	80.952	Ailuropoda_melanoleuca
ENSTGUG00000011140	-	100	76.190	ENSACIG00000015196	nmd3	99	76.190	Amphilophus_citrinellus
ENSTGUG00000011140	-	100	80.159	ENSAOCG00000009086	nmd3	99	80.159	Amphiprion_ocellaris
ENSTGUG00000011140	-	100	79.960	ENSAPEG00000000329	nmd3	99	79.960	Amphiprion_percula
ENSTGUG00000011140	-	100	80.357	ENSATEG00000014351	nmd3	99	80.357	Anabas_testudineus
ENSTGUG00000011140	-	100	88.469	ENSAPLG00000014786	NMD3	99	88.469	Anas_platyrhynchos
ENSTGUG00000011140	-	100	87.674	ENSACAG00000007349	NMD3	99	87.674	Anolis_carolinensis
ENSTGUG00000011140	-	99	80.723	ENSANAG00000026434	NMD3	99	80.723	Aotus_nancymaae
ENSTGUG00000011140	-	100	80.159	ENSACLG00000015520	nmd3	99	80.159	Astatotilapia_calliptera
ENSTGUG00000011140	-	100	79.167	ENSAMXG00000014415	nmd3	99	79.167	Astyanax_mexicanus
ENSTGUG00000011140	-	100	80.716	ENSBTAG00000016228	NMD3	100	80.716	Bos_taurus
ENSTGUG00000011140	-	98	49.701	WBGene00012030	T25G3.3	97	49.701	Caenorhabditis_elegans
ENSTGUG00000011140	-	99	81.288	ENSCJAG00000002900	NMD3	97	81.288	Callithrix_jacchus
ENSTGUG00000011140	-	99	81.288	ENSCAFG00000014352	NMD3	97	81.288	Canis_familiaris
ENSTGUG00000011140	-	100	80.517	ENSCAFG00020021145	NMD3	99	80.517	Canis_lupus_dingo
ENSTGUG00000011140	-	100	80.318	ENSCHIG00000016015	NMD3	100	80.318	Capra_hircus
ENSTGUG00000011140	-	100	81.710	ENSTSYG00000002155	NMD3	99	81.710	Carlito_syrichta
ENSTGUG00000011140	-	80	80.250	ENSCAPG00000017861	NMD3	93	80.250	Cavia_aperea
ENSTGUG00000011140	-	87	80.092	ENSCPOG00000005953	NMD3	94	80.092	Cavia_porcellus
ENSTGUG00000011140	-	100	80.915	ENSCCAG00000037460	NMD3	100	80.915	Cebus_capucinus
ENSTGUG00000011140	-	100	81.113	ENSCATG00000030022	NMD3	100	81.113	Cercocebus_atys
ENSTGUG00000011140	-	100	80.716	ENSCLAG00000003155	NMD3	100	80.716	Chinchilla_lanigera
ENSTGUG00000011140	-	100	81.113	ENSCSAG00000012333	NMD3	100	81.113	Chlorocebus_sabaeus
ENSTGUG00000011140	-	80	83.392	ENSCHOG00000001240	NMD3	80	83.392	Choloepus_hoffmanni
ENSTGUG00000011140	-	100	87.873	ENSCPBG00000018318	NMD3	99	89.006	Chrysemys_picta_bellii
ENSTGUG00000011140	-	96	55.738	ENSCING00000002129	-	96	55.738	Ciona_intestinalis
ENSTGUG00000011140	-	88	54.484	ENSCSAVG00000001120	-	98	54.484	Ciona_savignyi
ENSTGUG00000011140	-	99	75.100	ENSCANG00000042939	NMD3	95	75.100	Colobus_angolensis_palliatus
ENSTGUG00000011140	-	91	71.739	ENSCGRG00001001792	Nmd3	97	71.739	Cricetulus_griseus_chok1gshd
ENSTGUG00000011140	-	97	81.391	ENSCGRG00000007947	Nmd3	98	81.391	Cricetulus_griseus_crigri
ENSTGUG00000011140	-	100	79.563	ENSCSEG00000017954	nmd3	99	79.563	Cynoglossus_semilaevis
ENSTGUG00000011140	-	100	72.817	ENSCVAG00000004672	nmd3	99	72.817	Cyprinodon_variegatus
ENSTGUG00000011140	-	100	78.812	ENSDARG00000015676	nmd3	99	78.812	Danio_rerio
ENSTGUG00000011140	-	100	79.523	ENSDNOG00000045222	NMD3	100	79.523	Dasypus_novemcinctus
ENSTGUG00000011140	-	97	73.566	ENSDORG00000005716	Nmd3	100	71.053	Dipodomys_ordii
ENSTGUG00000011140	-	98	55.424	FBgn0023542	Nmd3	97	55.424	Drosophila_melanogaster
ENSTGUG00000011140	-	100	69.980	ENSETEG00000003168	NMD3	99	69.980	Echinops_telfairi
ENSTGUG00000011140	-	89	58.352	ENSEBUG00000014316	nmd3	97	58.352	Eptatretus_burgeri
ENSTGUG00000011140	-	100	80.915	ENSEASG00005018672	NMD3	100	80.915	Equus_asinus_asinus
ENSTGUG00000011140	-	99	81.489	ENSECAG00000000188	NMD3	97	81.489	Equus_caballus
ENSTGUG00000011140	-	94	59.660	ENSEEUG00000010642	-	100	59.660	Erinaceus_europaeus
ENSTGUG00000011140	-	100	77.976	ENSELUG00000024123	nmd3	99	77.976	Esox_lucius
ENSTGUG00000011140	-	100	80.517	ENSFCAG00000022867	NMD3	99	80.517	Felis_catus
ENSTGUG00000011140	-	94	97.674	ENSFALG00000008711	NMD3	99	97.674	Ficedula_albicollis
ENSTGUG00000011140	-	100	80.754	ENSFDAG00000013724	-	100	80.754	Fukomys_damarensis
ENSTGUG00000011140	-	98	67.683	ENSFDAG00000012197	-	98	67.835	Fukomys_damarensis
ENSTGUG00000011140	-	100	78.770	ENSFHEG00000000415	nmd3	99	78.770	Fundulus_heteroclitus
ENSTGUG00000011140	-	97	77.096	ENSGMOG00000009675	nmd3	99	77.096	Gadus_morhua
ENSTGUG00000011140	-	100	92.445	ENSGALG00000009533	NMD3	99	92.445	Gallus_gallus
ENSTGUG00000011140	-	99	79.317	ENSGAFG00000012798	nmd3	94	79.317	Gambusia_affinis
ENSTGUG00000011140	-	100	79.167	ENSGACG00000010028	nmd3	99	79.167	Gasterosteus_aculeatus
ENSTGUG00000011140	-	100	87.674	ENSGAGG00000006556	NMD3	99	87.674	Gopherus_agassizii
ENSTGUG00000011140	-	99	66.335	ENSGGOG00000028590	-	99	66.335	Gorilla_gorilla
ENSTGUG00000011140	-	100	81.312	ENSGGOG00000007157	NMD3	100	81.312	Gorilla_gorilla
ENSTGUG00000011140	-	100	80.159	ENSHBUG00000001781	nmd3	99	80.159	Haplochromis_burtoni
ENSTGUG00000011140	-	100	80.915	ENSHGLG00000014451	-	100	80.915	Heterocephalus_glaber_female
ENSTGUG00000011140	-	100	65.805	ENSHGLG00000010477	-	100	65.805	Heterocephalus_glaber_female
ENSTGUG00000011140	-	100	65.805	ENSHGLG00100001042	-	100	65.805	Heterocephalus_glaber_male
ENSTGUG00000011140	-	100	80.915	ENSHGLG00100006613	-	100	80.915	Heterocephalus_glaber_male
ENSTGUG00000011140	-	99	78.728	ENSHCOG00000004292	nmd3	92	78.728	Hippocampus_comes
ENSTGUG00000011140	-	100	79.563	ENSIPUG00000005073	nmd3	99	79.563	Ictalurus_punctatus
ENSTGUG00000011140	-	100	81.312	ENSSTOG00000001899	NMD3	100	81.312	Ictidomys_tridecemlineatus
ENSTGUG00000011140	-	97	82.172	ENSJJAG00000019759	Nmd3	99	82.172	Jaculus_jaculus
ENSTGUG00000011140	-	100	79.563	ENSKMAG00000020427	nmd3	99	79.563	Kryptolebias_marmoratus
ENSTGUG00000011140	-	100	78.854	ENSLBEG00000022216	nmd3	99	78.854	Labrus_bergylta
ENSTGUG00000011140	-	99	76.707	ENSLACG00000005731	NMD3	99	79.634	Latimeria_chalumnae
ENSTGUG00000011140	-	100	81.548	ENSLOCG00000003561	nmd3	99	81.548	Lepisosteus_oculatus
ENSTGUG00000011140	-	100	78.571	ENSLAFG00000007231	NMD3	100	78.571	Loxodonta_africana
ENSTGUG00000011140	-	100	81.113	ENSMFAG00000040934	NMD3	100	81.113	Macaca_fascicularis
ENSTGUG00000011140	-	99	80.677	ENSMMUG00000009564	NMD3	99	81.672	Macaca_mulatta
ENSTGUG00000011140	-	100	81.113	ENSMNEG00000034626	NMD3	100	81.113	Macaca_nemestrina
ENSTGUG00000011140	-	88	82.393	ENSMLEG00000002741	NMD3	100	82.393	Mandrillus_leucophaeus
ENSTGUG00000011140	-	100	79.167	ENSMAMG00000012427	nmd3	99	79.167	Mastacembelus_armatus
ENSTGUG00000011140	-	100	80.159	ENSMZEG00005016888	nmd3	99	80.159	Maylandia_zebra
ENSTGUG00000011140	-	100	91.054	ENSMGAG00000010498	NMD3	99	91.054	Meleagris_gallopavo
ENSTGUG00000011140	-	100	80.119	ENSMAUG00000000633	Nmd3	100	80.119	Mesocricetus_auratus
ENSTGUG00000011140	-	100	81.113	ENSMICG00000049196	NMD3	100	81.113	Microcebus_murinus
ENSTGUG00000011140	-	99	79.880	ENSMOCG00000005180	Nmd3	100	79.880	Microtus_ochrogaster
ENSTGUG00000011140	-	100	79.406	ENSMMOG00000012765	nmd3	99	79.406	Mola_mola
ENSTGUG00000011140	-	100	64.410	ENSMODG00000016296	NMD3	100	64.603	Monodelphis_domestica
ENSTGUG00000011140	-	100	80.159	ENSMALG00000009256	nmd3	99	80.159	Monopterus_albus
ENSTGUG00000011140	-	100	79.920	MGP_CAROLIEiJ_G0025069	Nmd3	100	79.920	Mus_caroli
ENSTGUG00000011140	-	100	80.119	ENSMUSG00000027787	Nmd3	100	80.119	Mus_musculus
ENSTGUG00000011140	-	100	80.915	MGP_PahariEiJ_G0026512	Nmd3	100	80.915	Mus_pahari
ENSTGUG00000011140	-	100	80.318	MGP_SPRETEiJ_G0026011	Nmd3	100	80.318	Mus_spretus
ENSTGUG00000011140	-	100	81.113	ENSMPUG00000002955	NMD3	99	81.113	Mustela_putorius_furo
ENSTGUG00000011140	-	97	77.597	ENSMLUG00000000701	NMD3	97	77.597	Myotis_lucifugus
ENSTGUG00000011140	-	99	80.279	ENSNGAG00000012307	Nmd3	99	80.279	Nannospalax_galili
ENSTGUG00000011140	-	100	79.762	ENSNBRG00000003324	nmd3	99	79.762	Neolamprologus_brichardi
ENSTGUG00000011140	-	100	81.312	ENSNLEG00000004655	NMD3	99	82.315	Nomascus_leucogenys
ENSTGUG00000011140	-	73	71.053	ENSOPRG00000007690	-	73	71.053	Ochotona_princeps
ENSTGUG00000011140	-	100	81.113	ENSODEG00000006270	NMD3	99	82.377	Octodon_degus
ENSTGUG00000011140	-	100	80.952	ENSONIG00000003643	nmd3	99	80.952	Oreochromis_niloticus
ENSTGUG00000011140	-	99	81.288	ENSOCUG00000017454	NMD3	99	81.288	Oryctolagus_cuniculus
ENSTGUG00000011140	-	100	80.754	ENSORLG00000006279	nmd3	99	80.754	Oryzias_latipes
ENSTGUG00000011140	-	100	80.556	ENSORLG00020003843	nmd3	99	80.556	Oryzias_latipes_hni
ENSTGUG00000011140	-	100	80.517	ENSORLG00015006379	nmd3	99	80.517	Oryzias_latipes_hsok
ENSTGUG00000011140	-	100	80.556	ENSOMEG00000012144	nmd3	99	80.556	Oryzias_melastigma
ENSTGUG00000011140	-	100	82.107	ENSOGAG00000014910	NMD3	100	82.107	Otolemur_garnettii
ENSTGUG00000011140	-	99	80.561	ENSOARG00000001883	NMD3	97	80.561	Ovis_aries
ENSTGUG00000011140	-	100	81.312	ENSPPAG00000043829	NMD3	100	81.312	Pan_paniscus
ENSTGUG00000011140	-	99	80.677	ENSPPRG00000000724	NMD3	98	80.677	Panthera_pardus
ENSTGUG00000011140	-	100	80.318	ENSPTIG00000016761	NMD3	99	80.318	Panthera_tigris_altaica
ENSTGUG00000011140	-	100	81.312	ENSPTRG00000015586	NMD3	100	81.312	Pan_troglodytes
ENSTGUG00000011140	-	99	80.677	ENSPANG00000006665	NMD3	95	80.677	Papio_anubis
ENSTGUG00000011140	-	100	79.167	ENSPKIG00000009928	nmd3	99	79.167	Paramormyrops_kingsleyae
ENSTGUG00000011140	-	100	86.879	ENSPSIG00000007591	NMD3	99	86.879	Pelodiscus_sinensis
ENSTGUG00000011140	-	100	75.595	ENSPMGG00000014015	nmd3	99	75.595	Periophthalmus_magnuspinnatus
ENSTGUG00000011140	-	100	80.716	ENSPEMG00000021880	Nmd3	100	80.716	Peromyscus_maniculatus_bairdii
ENSTGUG00000011140	-	100	84.095	ENSPCIG00000020869	NMD3	100	84.095	Phascolarctos_cinereus
ENSTGUG00000011140	-	100	79.960	ENSPFOG00000012103	nmd3	99	79.960	Poecilia_formosa
ENSTGUG00000011140	-	100	79.960	ENSPLAG00000008087	nmd3	99	79.960	Poecilia_latipinna
ENSTGUG00000011140	-	100	79.960	ENSPMEG00000008506	nmd3	99	79.960	Poecilia_mexicana
ENSTGUG00000011140	-	100	79.960	ENSPREG00000001848	nmd3	99	79.960	Poecilia_reticulata
ENSTGUG00000011140	-	100	81.511	ENSPPYG00000014263	NMD3	100	81.511	Pongo_abelii
ENSTGUG00000011140	-	91	65.435	ENSPCAG00000009851	NMD3	100	65.435	Procavia_capensis
ENSTGUG00000011140	-	85	75.630	ENSPVAG00000003301	NMD3	85	75.630	Pteropus_vampyrus
ENSTGUG00000011140	-	100	80.159	ENSPNYG00000006778	nmd3	99	80.159	Pundamilia_nyererei
ENSTGUG00000011140	-	100	79.167	ENSPNAG00000009442	nmd3	99	79.167	Pygocentrus_nattereri
ENSTGUG00000011140	-	100	79.523	ENSRNOG00000009310	Nmd3	100	79.523	Rattus_norvegicus
ENSTGUG00000011140	-	100	77.535	ENSRBIG00000040379	NMD3	100	77.535	Rhinopithecus_bieti
ENSTGUG00000011140	-	100	80.915	ENSRROG00000036181	NMD3	100	80.915	Rhinopithecus_roxellana
ENSTGUG00000011140	-	97	45.010	YHR170W	NMD3	97	45.205	Saccharomyces_cerevisiae
ENSTGUG00000011140	-	98	81.670	ENSSBOG00000024021	NMD3	97	81.762	Saimiri_boliviensis_boliviensis
ENSTGUG00000011140	-	100	77.734	ENSSHAG00000016044	NMD3	100	77.734	Sarcophilus_harrisii
ENSTGUG00000011140	-	100	79.563	ENSSFOG00015003609	nmd3	99	79.563	Scleropages_formosus
ENSTGUG00000011140	-	100	78.373	ENSSMAG00000012887	nmd3	99	78.373	Scophthalmus_maximus
ENSTGUG00000011140	-	100	79.960	ENSSDUG00000023721	nmd3	99	79.960	Seriola_dumerili
ENSTGUG00000011140	-	100	80.357	ENSSLDG00000006565	nmd3	99	80.357	Seriola_lalandi_dorsalis
ENSTGUG00000011140	-	97	81.967	ENSSARG00000010402	NMD3	99	81.967	Sorex_araneus
ENSTGUG00000011140	-	99	85.972	ENSSPUG00000018791	NMD3	100	85.972	Sphenodon_punctatus
ENSTGUG00000011140	-	100	80.159	ENSSPAG00000014328	nmd3	99	80.159	Stegastes_partitus
ENSTGUG00000011140	-	100	81.312	ENSSSCG00000022952	NMD3	100	81.312	Sus_scrofa
ENSTGUG00000011140	-	100	79.167	ENSTRUG00000005958	nmd3	99	79.167	Takifugu_rubripes
ENSTGUG00000011140	-	100	58.449	ENSTBEG00000011783	-	100	58.449	Tupaia_belangeri
ENSTGUG00000011140	-	100	76.143	ENSTTRG00000012938	NMD3	100	76.143	Tursiops_truncatus
ENSTGUG00000011140	-	80	79.602	ENSUAMG00000009305	-	99	79.602	Ursus_americanus
ENSTGUG00000011140	-	99	81.727	ENSUMAG00000011070	NMD3	99	81.690	Ursus_maritimus
ENSTGUG00000011140	-	100	80.517	ENSVPAG00000008779	NMD3	100	80.517	Vicugna_pacos
ENSTGUG00000011140	-	100	79.920	ENSVVUG00000023055	NMD3	99	80.282	Vulpes_vulpes
ENSTGUG00000011140	-	100	83.897	ENSXETG00000027727	nmd3	99	83.897	Xenopus_tropicalis
ENSTGUG00000011140	-	59	83.133	ENSXCOG00000012490	nmd3	81	85.000	Xiphophorus_couchianus
ENSTGUG00000011140	-	100	79.762	ENSXMAG00000018406	nmd3	99	79.762	Xiphophorus_maculatus